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Morris-Lecar example does not match paper #68

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alexfikl opened this issue Feb 4, 2025 · 0 comments
Open

Morris-Lecar example does not match paper #68

alexfikl opened this issue Feb 4, 2025 · 0 comments
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bug Something isn't working fode Changes to the FODE module

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@alexfikl
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alexfikl commented Feb 4, 2025

The parameters for the Morris-Lecar model are taken from https://doi.org/10.1016/j.cnsns.2013.10.032.

However, using $\alpha = 0.95$ like in the paper does not give the same results. The current example uses $\alpha = 0.995$ to get something similar. It's not clear if this is a bug in our implementation or some copy-pasting error

alpha = (0.995, 0.995, 0.995)
param = StandardMorrisLecarParameter(
C=1.0,
g_L=0.5,
g_Ca=1.36,
g_K=2.0,
v_L=-0.5,
v_Ca=1.0,
v_K=-0.725,
epsilon=0.003,
v_0=0.1,
phi=1.0 / 3.0,
vinf=(-0.01, 0.15, 0.1, 0.16),
)

@alexfikl alexfikl added bug Something isn't working fode Changes to the FODE module help wanted Extra attention is needed labels Feb 4, 2025
@alexfikl alexfikl removed the help wanted Extra attention is needed label Feb 28, 2025
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