| Week | Topic | Assignments |
|---|---|---|
| WEEK_1 | RNA-seq | GSE198256 Differential Expression |
| WEEK_2 | RNA-seq | Differential Expression + Functional Analysis |
| WEEK_3 | ATAC-seq | GSE79019 (Monocyte 3hs, 6hrs, 12hrs) Differential Accessibility |
| WEEK_4 | scRNA-seq | SnakeMake Pipeline scRNA (Group3*) |
| WEEK_5 | Multiome | scATAC + scRNA |
| WEEK_6 | Integration | scRNA + bulkATAC Integration (Group3*) |
| WEEK_7 | DNA Methylation | GSE188573 Quality Control + DMP + DVP + ORA (Group3*) |
| FINAL | Hi-C | Group Project: Aleksandra Kurowska, Anel Gonzalez, Rohit Satyam |
Group3: Aleksandra Kurowska, Rund Tawfiq, Fatimah Alsultan, Ana Gonzalez Alvarez