DESCRIPTION

Encoding: UTF-8
Package: EaCoN
Type: Package
Title: EaCoN : Easy Copy Number !
Version: 0.3.3-1
Date: 2018-09-18
Author: Bastien Job
Maintainer: Bastien JOB <bastien.job@inserm.fr>
Depends: R(>= 3.1.0)
Imports: affxparser, ASCAT, Biostrings, aroma.light, BSgenome, changepoint, chromosomes, copynumber, data.table, doParallel, dplyr, DT, facets, foreach, GenomeInfoDb, GenomicRanges, iotools, IRanges, limma, mclust, parallel, rhdf5, R.utils, seqinr, sequenza
Suggests: BSgenome.Hsapiens.UCSC.hg18, BSgenome.Hsapiens.UCSC.hg19, BSgenome.Hsapiens.UCSC.hg38, Rsamtools, affy.CN.norm.data, apt.cytoscan.2.4.0, apt.oncoscan.2.4.0, apt.snp6.1.20.0, knitr, rcnorm, rmarkdown
Description: Easy copy-number analysis for Affymetrix microarrays (snp6.0, CytoScanHD, CytoScan750K & OncoScan) and whole exome sequencing data.
License: MIT + file LICENSE
LazyData: FALSE
Byte-Compile: yes