Skip to content

Issues: apcamargo/genomad

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

48 Open 92 Closed
48 Open 92 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

The question about calculation formula for SPM
#144 opened Jan 29, 2025 by zzzfire
1
Question about geNomad’s marker dataset
#142 opened Jan 14, 2025 by ZihengWu
3
plasmid/chromosome/virus Classification problem
#141 opened Jan 8, 2025 by darwin4442
3
Process hangs indefinitely during "Predicting proteins with pyrodigal-gv"
#138 opened Dec 30, 2024 by franky2204
1
Qinviridae classified as Paramyxoviridae
#137 opened Dec 16, 2024 by LanderDC
1
Morphology identification
#136 opened Dec 11, 2024 by xjhzjucas
4
Inquiry
#135 opened Nov 28, 2024 by songmj86
1
download-databas / zenodo link :: different links
#134 opened Nov 27, 2024 by EricDeveaud
how to transform the output _taxonomy.tsv file into sample level mpa file?
#132 opened Nov 9, 2024 by joelive
3
run failed during annotation
#131 opened Nov 8, 2024 by mikenada
3
The letter M exists in the viral genome
#130 opened Nov 5, 2024 by lsj-666
1
Genomad license in Galaxy tools
#127 opened Oct 5, 2024 by bernt-matthias
5
Usage of score calibration
#126 opened Sep 27, 2024 by zehanna
5
Identification of plasmids in main contig
#124 opened Sep 20, 2024 by Kir283
1
Question about use of calibrated aggregation scores
#122 opened Sep 11, 2024 by gweeenis
1
Question on fundamentals
#121 opened Sep 9, 2024 by songmj86
1
line 19 in aggregated_classfication.py
#120 opened Sep 2, 2024 by caojy-sys
2
Discrepancy in Output Counts in Genomad
#119 opened Aug 29, 2024 by F4NG666
1
Number of contigs in the assembly
#117 opened Aug 21, 2024 by coreyholt
1
How to export the viral DNA gene sequence?
#116 opened Aug 2, 2024 by wfgui
5
The question about --disable-nn-classification
#111 opened Jul 16, 2024 by ZoeLct
1
plasmid classified as virus? enhancement New feature or request good first issue Good for newcomers
#108 opened Jun 24, 2024 by xinehc
7
genomad annotate fastq file is empty or contains multiple entries
#107 opened Jun 20, 2024 by skose82
3
Error while classifying sequences
#105 opened Jun 18, 2024 by LCFortier
9
geNomad taxonomy about Baltimore classification
#100 opened May 14, 2024 by xjhzjucas
1
ProTip! Adding no:label will show everything without a label.