diff --git a/config/organise_config/organise_runfolder.yml b/config/organise_configs/runfolder.yml similarity index 84% rename from config/organise_config/organise_runfolder.yml rename to config/organise_configs/runfolder.yml index 3b85431..c342532 100644 --- a/config/organise_config/organise_runfolder.yml +++ b/config/organise_configs/runfolder.yml @@ -19,13 +19,13 @@ files_to_organize: link_type: softlink regex: (?P[\w-]+)/Sample_(?P[\w-]+)/(?P=samplename)_S(?P\d+)_L(?P\d+)_R(?P\d)_001.fastq.gz - #The MultiQC files - - source: "{runfolder}/seqreports/project/*" - destination: "{organised}/{projectid}//" - options: - required: True - link_type: softlink - regexp: (?P[\w-]+)/\w+_(?P=projectid)_multiqc_report[\w.-]+ + # The MultiQC files + - source: "{runfolder}/seqreports/project/*" + destination: "{organised}/{projectid}//" + options: + required: True + link_type: softlink + regexp: (?P[\w-]+)/\w+_(?P=projectid)_multiqc_report[\w.-]+