From 6e49202c0491e83cdb04732a1528745ab94359ab Mon Sep 17 00:00:00 2001
From: Adrien Coulier <adrien.coulier@medsci.uu.se>
Date: Wed, 13 Sep 2023 14:22:08 +0200
Subject: [PATCH] Fix runfolder config yaml syntax

---
 .../runfolder.yml}                                 | 14 +++++++-------
 1 file changed, 7 insertions(+), 7 deletions(-)
 rename config/{organise_config/organise_runfolder.yml => organise_configs/runfolder.yml} (84%)

diff --git a/config/organise_config/organise_runfolder.yml b/config/organise_configs/runfolder.yml
similarity index 84%
rename from config/organise_config/organise_runfolder.yml
rename to config/organise_configs/runfolder.yml
index 3b85431..c342532 100644
--- a/config/organise_config/organise_runfolder.yml
+++ b/config/organise_configs/runfolder.yml
@@ -19,13 +19,13 @@ files_to_organize:
       link_type: softlink
       regex: (?P<projectid>[\w-]+)/Sample_(?P<samplename>[\w-]+)/(?P=samplename)_S(?P<samplenumber>\d+)_L(?P<lanes>\d+)_R(?P<read>\d)_001.fastq.gz
 
-   #The MultiQC files
-   - source: "{runfolder}/seqreports/project/*"
-     destination: "{organised}/{projectid}/<runfolder_name>/"
-     options:
-       required: True
-       link_type: softlink
-       regexp: (?P<projectid>[\w-]+)/\w+_(?P=projectid)_multiqc_report[\w.-]+
+   # The MultiQC files
+  - source: "{runfolder}/seqreports/project/*"
+    destination: "{organised}/{projectid}/<runfolder_name>/"
+    options:
+      required: True
+      link_type: softlink
+      regexp: (?P<projectid>[\w-]+)/\w+_(?P=projectid)_multiqc_report[\w.-]+