Assemblies

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Rachel Glover edited this page Jun 19, 2013 · 7 revisions

RNAseq data

Ashwellthorpe lower wood

12 Dec 2012 - TSL assembled the RNAseq reads for sample AT1 using Trinity (mixed_material/ashwellthorpe_AT1/assemblies/AT1_trinity.fasta).

19 Dec 2012 - TSL assemblied the RNAseq reads for sample AT2 using Trinity version 5-19-2011 (mixed_material/ashwellthorpe_AT2/assemblies/AT2_trinity_version2.fasta)

28 Jan 2013 - TSL assembled the RNAseq reads for an uninfected Ash tree sample ATU1 using Trinity (fraxinus_excelsior/Ashwellthorpe_ATU1/assemblies)

Holt Country Park

17 June 2013 - FERA assembled the RNAseq reads for sample HP1 using Trinity (mixed_material/Holt_Country_Park_HP1/assemblies)

Upton Broad and Marshes

17 June 2013 - FERA assembled the RNAseq reads for sample UB1 using Trinity (mixed_material/Upton_broad_and_marshes_UB1/assemblies)

genomic DNA data

Kenninghall wood

22 Jan 2013 - TGAC assemblied the genomic DNA reads for sample KW1 (chalara_fraxinea/Kenninghall_wood_KW1/assemblies