Update the examples and example instructions (#63)

examples/README.md

@@ -3,16 +3,20 @@
 Examples are generated with the following code (from the root of the repo):
 
 ```
+mkdir examples
+mkdir examples/arfi_example
 synergy_dataset get -d van_de_Schoot_2018 Smid_2020 -o examples/arfi_example/data -l
 cd examples/arfi_example
-asreview makita template arfi
+asreview makita template arfi --platform linux
 cd ../..
+mkdir examples/basic_example
 synergy_dataset get -d van_de_Schoot_2018 Smid_2020 -o examples/basic_example/data -l
 cd examples/basic_example
-asreview makita template basic
+asreview makita template basic --platform linux
 cd ../..
+mkdir examples/multimodel_example
 synergy_dataset get -d van_de_Schoot_2018 Smid_2020 -o examples/multimodel_example/data -l
 cd examples/multimodel_example
-asreview makita template multimodel
+asreview makita template multimodel --platform linux
 cd ../..
 ```

examples/arfi_example/README.md

@@ -1,6 +1,6 @@
 # Simulation study
 
-*This project was rendered with ASReview-Makita version 0.0.0.*
+*This project was rendered with ASReview-Makita version 0.9.2.*
 
 This project was rendered from the Makita-ARFI template. See [asreview/asreview-makita#templates](https://github.com/asreview/asreview-makita#templates) for template rules and formats.
 
@@ -14,7 +14,7 @@ This project depends on Python 3.7 or later (python.org/download), and [ASReview
 pip install asreview>=1.0 asreview-insights>=1.1.2 asreview-datatools
 ```
 
-If wordcloud images are required, install the following dependencies.
+For generating wordclouds, install the following dependencies.
 
 ```sh
 pip install asreview-wordcloud
@@ -24,8 +24,8 @@ pip install asreview-wordcloud
 
 The performance on the following datasets is evaluated:
 
-- data/van_de_Schoot_2018.csv
-- data/Smid_2020.csv
+- data\Smid_2020.csv
+- data\van_de_Schoot_2018.csv
 
 ## Run simulation
 
@@ -43,8 +43,8 @@ The following files are found in this project:
     ├── 📜README.md
     ├── 📜jobs.sh
     ├── 📂data
-    │   ├── 📜van_de_Schoot_2018.csv
     │   ├── 📜Smid_2020.csv
+    │   ├── 📜van_de_Schoot_2018.csv
     ├── 📂scripts
     │   ├── 📜get_plot.py
     │   ├── 📜merge_descriptives.py
@@ -53,45 +53,45 @@ The following files are found in this project:
     │   └── 📜...
     └── 📂output
         ├── 📂simulation
-        |   └── 📂van_de_Schoot_2018
+        |   └── 📂Smid_2020
         |       ├── 📂descriptives
-        |       |   └── 📜data_stats_van_de_Schoot_2018.json
+        |       |   └── 📜data_stats_Smid_2020.json
         |       ├── 📂state_files
-        |       |   ├── 📜sim_van_de_Schoot_2018_`x`.asreview
+        |       |   ├── 📜sim_Smid_2020_`x`.asreview
         |       |   └── 📜...
         |       └── 📂metrics
-        |           ├── 📜metrics_sim_van_de_Schoot_2018_`x`.json
+        |           ├── 📜metrics_sim_Smid_2020_`x`.json
         |           └── 📜...
-        |   └── 📂Smid_2020
+        |   └── 📂van_de_Schoot_2018
         |       ├── 📂descriptives
-        |       |   └── 📜data_stats_Smid_2020.json
+        |       |   └── 📜data_stats_van_de_Schoot_2018.json
         |       ├── 📂state_files
-        |       |   ├── 📜sim_Smid_2020_`x`.asreview
+        |       |   ├── 📜sim_van_de_Schoot_2018_`x`.asreview
         |       |   └── 📜...
         |       └── 📂metrics
-        |           ├── 📜metrics_sim_Smid_2020_`x`.json
+        |           ├── 📜metrics_sim_van_de_Schoot_2018_`x`.json
         |           └── 📜...
         ├── 📂tables
         |   ├── 📜data_descriptives.csv
         |   ├── 📜data_descriptives.xlsx
-        |   ├── 📜tds_sim_van_de_Schoot_2018.csv
-        |   ├── 📜tds_sim_van_de_Schoot_2018.xlsx
         |   ├── 📜tds_sim_Smid_2020.csv
         |   ├── 📜tds_sim_Smid_2020.xlsx
+        |   ├── 📜tds_sim_van_de_Schoot_2018.csv
+        |   ├── 📜tds_sim_van_de_Schoot_2018.xlsx
         |   ├── 📜tds_summary.csv
         |   ├── 📜tds_summary.xlsx
-        |   ├── 📜metrics_sim_van_de_Schoot_2018_metrics.csv
-        |   ├── 📜metrics_sim_van_de_Schoot_2018_metrics.xlsx
         |   ├── 📜metrics_sim_Smid_2020_metrics.csv
         |   ├── 📜metrics_sim_Smid_2020_metrics.xlsx
+        |   ├── 📜metrics_sim_van_de_Schoot_2018_metrics.csv
+        |   ├── 📜metrics_sim_van_de_Schoot_2018_metrics.xlsx
         |   ├── 📜metrics_summary.csv
         |   └── 📜metrics_summary.xlsx
         └── 📂figures
-            ├── 📈plot_recall_van_de_Schoot_2018.png
             ├── 📈plot_recall_Smid_2020.png
-            ├── 📈wordcloud_van_de_Schoot_2018.png
-            ├── 📈wordcloud_relevant_van_de_Schoot_2018.png
-            └── 📈wordcloud_irrelevant_van_de_Schoot_2018.png
+            ├── 📈plot_recall_van_de_Schoot_2018.png
             ├── 📈wordcloud_Smid_2020.png
             ├── 📈wordcloud_relevant_Smid_2020.png
             └── 📈wordcloud_irrelevant_Smid_2020.png
+            ├── 📈wordcloud_van_de_Schoot_2018.png
+            ├── 📈wordcloud_relevant_van_de_Schoot_2018.png
+            └── 📈wordcloud_irrelevant_van_de_Schoot_2018.png