From 0c6868babdfac317f870fd23a8069ad803ba862c Mon Sep 17 00:00:00 2001
From: jessicasyu <15913767+jessicasyu@users.noreply.github.com>
Date: Wed, 25 Sep 2024 18:06:34 +0000
Subject: [PATCH] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20bagheril?=
 =?UTF-8?q?ab/arcade-collection@6dc6f30f31400f1be3543458ac4e5f4f0c0473c3?=
 =?UTF-8?q?=20=F0=9F=9A=80?=
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit

---
 .buildinfo                                    |   2 +-
 .../convert/convert_to_contours.html          |   6 +-
 .../convert/convert_to_images.html            |   6 +-
 .../convert/convert_to_meshes.html            |   6 +-
 .../convert/convert_to_projection.html        |   6 +-
 .../convert/convert_to_simularium.html        |   6 +-
 .../convert_to_simularium_objects.html        |   6 +-
 .../convert/convert_to_simularium_shapes.html |   6 +-
 .../convert/convert_to_tfe.html               |   6 +-
 .../input/convert_to_cells_file.html          |   6 +-
 .../input/convert_to_locations_file.html      |   6 +-
 .../input/generate_setup_file.html            |   6 +-
 .../input/group_template_conditions.html      |   6 +-
 .../input/merge_region_samples.html           |   6 +-
 .../output/convert_model_units.html           |   6 +-
 .../output/extract_tick_json.html             |   6 +-
 .../output/get_location_voxels.html           |   6 +-
 .../output/parse_cells_file.html              |   6 +-
 .../output/parse_growth_file.html             |   6 +-
 .../output/parse_locations_file.html          |   6 +-
 _modules/index.html                           |   6 +-
 _static/documentation_options.js              |   2 +-
 ...ollection.convert.convert_to_contours.html |   6 +-
 ..._collection.convert.convert_to_images.html |   6 +-
 ..._collection.convert.convert_to_meshes.html |   6 +-
 ...lection.convert.convert_to_projection.html |   6 +-
 ...lection.convert.convert_to_simularium.html |   6 +-
 ...convert.convert_to_simularium_objects.html |   6 +-
 ....convert.convert_to_simularium_shapes.html |   6 +-
 ...ade_collection.convert.convert_to_tfe.html |   6 +-
 _summary/arcade_collection.convert.html       |   6 +-
 ...ollection.input.convert_to_cells_file.html |   6 +-
 ...ction.input.convert_to_locations_file.html |   6 +-
 ..._collection.input.generate_setup_file.html |   6 +-
 ...ction.input.group_template_conditions.html |   6 +-
 _summary/arcade_collection.input.html         |   6 +-
 ...collection.input.merge_region_samples.html |   6 +-
 ...collection.output.convert_model_units.html |   6 +-
 ...e_collection.output.extract_tick_json.html |   6 +-
 ...collection.output.get_location_voxels.html |   6 +-
 _summary/arcade_collection.output.html        |   6 +-
 ...de_collection.output.parse_cells_file.html |   6 +-
 ...e_collection.output.parse_growth_file.html |   6 +-
 ...ollection.output.parse_locations_file.html |   6 +-
 changelog.html                                | 233 ++++++++++--------
 genindex.html                                 |   6 +-
 index.html                                    |   6 +-
 py-modindex.html                              |   6 +-
 search.html                                   |   6 +-
 searchindex.js                                |   2 +-
 50 files changed, 272 insertions(+), 243 deletions(-)

diff --git a/.buildinfo b/.buildinfo
index 172c0dc..7ca66b6 100644
--- a/.buildinfo
+++ b/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: acd1595f25a82712678b1b0f53b0aeef
+config: ebb37669103cad65e94e5ab0b035ec8a
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/_modules/arcade_collection/convert/convert_to_contours.html b/_modules/arcade_collection/convert/convert_to_contours.html
index c256f1f..fab0aa0 100644
--- a/_modules/arcade_collection/convert/convert_to_contours.html
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@@ -5,7 +5,7 @@
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>arcade_collection.convert.convert_to_contours - ARCADE Collection 0.15.0</title>
+        <title>arcade_collection.convert.convert_to_contours - ARCADE Collection 0.16.0</title>
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     <link rel="stylesheet" type="text/css" href="../../../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
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@@ -123,7 +123,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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       <div class="sidebar-sticky"><a class="sidebar-brand" href="../../../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
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   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
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index 6e2cbc6..8b1e429 100644
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>arcade_collection.convert.convert_to_images - ARCADE Collection 0.15.0</title>
+        <title>arcade_collection.convert.convert_to_images - ARCADE Collection 0.16.0</title>
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+      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
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   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_modules/arcade_collection/convert/convert_to_meshes.html b/_modules/arcade_collection/convert/convert_to_meshes.html
index 0174a72..7bdd650 100644
--- a/_modules/arcade_collection/convert/convert_to_meshes.html
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>arcade_collection.convert.convert_to_meshes - ARCADE Collection 0.15.0</title>
+        <title>arcade_collection.convert.convert_to_meshes - ARCADE Collection 0.16.0</title>
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     <link rel="stylesheet" type="text/css" href="../../../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
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     <div class="header-center">
-      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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@@ -146,7 +146,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../../../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
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   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_modules/arcade_collection/convert/convert_to_projection.html b/_modules/arcade_collection/convert/convert_to_projection.html
index 183d531..68ac974 100644
--- a/_modules/arcade_collection/convert/convert_to_projection.html
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>arcade_collection.convert.convert_to_projection - ARCADE Collection 0.15.0</title>
+        <title>arcade_collection.convert.convert_to_projection - ARCADE Collection 0.16.0</title>
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-      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
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   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_modules/arcade_collection/convert/convert_to_simularium.html b/_modules/arcade_collection/convert/convert_to_simularium.html
index 8197cd5..35214ee 100644
--- a/_modules/arcade_collection/convert/convert_to_simularium.html
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-        <title>arcade_collection.convert.convert_to_simularium - ARCADE Collection 0.15.0</title>
+        <title>arcade_collection.convert.convert_to_simularium - ARCADE Collection 0.16.0</title>
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-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
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index 035e729..a0abdbd 100644
--- a/_modules/arcade_collection/convert/convert_to_simularium_objects.html
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-        <title>arcade_collection.convert.convert_to_simularium_objects - ARCADE Collection 0.15.0</title>
+        <title>arcade_collection.convert.convert_to_simularium_objects - ARCADE Collection 0.16.0</title>
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     <link rel="stylesheet" type="text/css" href="../../../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
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@@ -123,7 +123,7 @@
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-      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
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   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
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index ddeede7..59e21b6 100644
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-        <title>arcade_collection.convert.convert_to_simularium_shapes - ARCADE Collection 0.15.0</title>
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index 626d7ca..da59a04 100644
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diff --git a/_modules/arcade_collection/input/convert_to_cells_file.html b/_modules/arcade_collection/input/convert_to_cells_file.html
index 1524e17..ef0f3b2 100644
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diff --git a/_modules/arcade_collection/input/convert_to_locations_file.html b/_modules/arcade_collection/input/convert_to_locations_file.html
index 4397b75..81c177d 100644
--- a/_modules/arcade_collection/input/convert_to_locations_file.html
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-        <title>arcade_collection.input.convert_to_locations_file - ARCADE Collection 0.15.0</title>
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+      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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       <div class="sidebar-sticky"><a class="sidebar-brand" href="../../../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
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diff --git a/_modules/arcade_collection/input/generate_setup_file.html b/_modules/arcade_collection/input/generate_setup_file.html
index 84c37b5..639202f 100644
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-        <title>arcade_collection.input.generate_setup_file - ARCADE Collection 0.15.0</title>
+        <title>arcade_collection.input.generate_setup_file - ARCADE Collection 0.16.0</title>
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-      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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       <div class="theme-toggle-container theme-toggle-header">
@@ -146,7 +146,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../../../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../../../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_modules/arcade_collection/input/group_template_conditions.html b/_modules/arcade_collection/input/group_template_conditions.html
index 7f97ffe..cc84977 100644
--- a/_modules/arcade_collection/input/group_template_conditions.html
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>arcade_collection.input.group_template_conditions - ARCADE Collection 0.15.0</title>
+        <title>arcade_collection.input.group_template_conditions - ARCADE Collection 0.16.0</title>
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@@ -123,7 +123,7 @@
       </label>
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-      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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@@ -146,7 +146,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../../../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../../../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_modules/arcade_collection/input/merge_region_samples.html b/_modules/arcade_collection/input/merge_region_samples.html
index 1ed6538..f25f39a 100644
--- a/_modules/arcade_collection/input/merge_region_samples.html
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>arcade_collection.input.merge_region_samples - ARCADE Collection 0.15.0</title>
+        <title>arcade_collection.input.merge_region_samples - ARCADE Collection 0.16.0</title>
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     <link rel="stylesheet" type="text/css" href="../../../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
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@@ -123,7 +123,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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       <div class="theme-toggle-container theme-toggle-header">
@@ -146,7 +146,7 @@
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-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../../../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_modules/arcade_collection/output/convert_model_units.html b/_modules/arcade_collection/output/convert_model_units.html
index 2327b7b..984b1ef 100644
--- a/_modules/arcade_collection/output/convert_model_units.html
+++ b/_modules/arcade_collection/output/convert_model_units.html
@@ -5,7 +5,7 @@
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>arcade_collection.output.convert_model_units - ARCADE Collection 0.15.0</title>
+        <title>arcade_collection.output.convert_model_units - ARCADE Collection 0.16.0</title>
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@@ -123,7 +123,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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       <div class="theme-toggle-container theme-toggle-header">
@@ -146,7 +146,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../../../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
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   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_modules/arcade_collection/output/extract_tick_json.html b/_modules/arcade_collection/output/extract_tick_json.html
index bf3145e..163a372 100644
--- a/_modules/arcade_collection/output/extract_tick_json.html
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@@ -5,7 +5,7 @@
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>arcade_collection.output.extract_tick_json - ARCADE Collection 0.15.0</title>
+        <title>arcade_collection.output.extract_tick_json - ARCADE Collection 0.16.0</title>
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@@ -123,7 +123,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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       <div class="theme-toggle-container theme-toggle-header">
@@ -146,7 +146,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../../../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../../../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_modules/arcade_collection/output/get_location_voxels.html b/_modules/arcade_collection/output/get_location_voxels.html
index f8e60c4..86959ed 100644
--- a/_modules/arcade_collection/output/get_location_voxels.html
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>arcade_collection.output.get_location_voxels - ARCADE Collection 0.15.0</title>
+        <title>arcade_collection.output.get_location_voxels - ARCADE Collection 0.16.0</title>
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     <link rel="stylesheet" type="text/css" href="../../../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
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@@ -123,7 +123,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -146,7 +146,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../../../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
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   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_modules/arcade_collection/output/parse_cells_file.html b/_modules/arcade_collection/output/parse_cells_file.html
index 901e910..02a3f88 100644
--- a/_modules/arcade_collection/output/parse_cells_file.html
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>arcade_collection.output.parse_cells_file - ARCADE Collection 0.15.0</title>
+        <title>arcade_collection.output.parse_cells_file - ARCADE Collection 0.16.0</title>
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@@ -123,7 +123,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -146,7 +146,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../../../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
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   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_modules/arcade_collection/output/parse_growth_file.html b/_modules/arcade_collection/output/parse_growth_file.html
index 21b06a5..0cfe2b4 100644
--- a/_modules/arcade_collection/output/parse_growth_file.html
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@@ -5,7 +5,7 @@
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>arcade_collection.output.parse_growth_file - ARCADE Collection 0.15.0</title>
+        <title>arcade_collection.output.parse_growth_file - ARCADE Collection 0.16.0</title>
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     <link rel="stylesheet" type="text/css" href="../../../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
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@@ -123,7 +123,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -146,7 +146,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../../../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../../../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_modules/arcade_collection/output/parse_locations_file.html b/_modules/arcade_collection/output/parse_locations_file.html
index 36305e8..4178910 100644
--- a/_modules/arcade_collection/output/parse_locations_file.html
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@@ -5,7 +5,7 @@
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>arcade_collection.output.parse_locations_file - ARCADE Collection 0.15.0</title>
+        <title>arcade_collection.output.parse_locations_file - ARCADE Collection 0.16.0</title>
       <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
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@@ -123,7 +123,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../../../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -146,7 +146,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../../../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../../../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_modules/index.html b/_modules/index.html
index 8336a89..fe4f850 100644
--- a/_modules/index.html
+++ b/_modules/index.html
@@ -5,7 +5,7 @@
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>Overview: module code - ARCADE Collection 0.15.0</title>
+        <title>Overview: module code - ARCADE Collection 0.16.0</title>
       <link rel="stylesheet" type="text/css" href="../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
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@@ -123,7 +123,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -146,7 +146,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_static/documentation_options.js b/_static/documentation_options.js
index 521c495..cf977cd 100644
--- a/_static/documentation_options.js
+++ b/_static/documentation_options.js
@@ -1,6 +1,6 @@
 var DOCUMENTATION_OPTIONS = {
     URL_ROOT: document.getElementById("documentation_options").getAttribute('data-url_root'),
-    VERSION: '0.15.0',
+    VERSION: '0.16.0',
     LANGUAGE: 'en',
     COLLAPSE_INDEX: false,
     BUILDER: 'html',
diff --git a/_summary/arcade_collection.convert.convert_to_contours.html b/_summary/arcade_collection.convert.convert_to_contours.html
index d270f24..b516f35 100644
--- a/_summary/arcade_collection.convert.convert_to_contours.html
+++ b/_summary/arcade_collection.convert.convert_to_contours.html
@@ -6,7 +6,7 @@
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>convert_to_contours - ARCADE Collection 0.15.0</title>
+        <title>convert_to_contours - ARCADE Collection 0.16.0</title>
       <link rel="stylesheet" type="text/css" href="../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
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@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.convert.convert_to_images.html b/_summary/arcade_collection.convert.convert_to_images.html
index 0d45f96..9e50d83 100644
--- a/_summary/arcade_collection.convert.convert_to_images.html
+++ b/_summary/arcade_collection.convert.convert_to_images.html
@@ -6,7 +6,7 @@
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>convert_to_images - ARCADE Collection 0.15.0</title>
+        <title>convert_to_images - ARCADE Collection 0.16.0</title>
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     <link rel="stylesheet" type="text/css" href="../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
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@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.convert.convert_to_meshes.html b/_summary/arcade_collection.convert.convert_to_meshes.html
index 32f1983..3f80f87 100644
--- a/_summary/arcade_collection.convert.convert_to_meshes.html
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@@ -6,7 +6,7 @@
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>convert_to_meshes - ARCADE Collection 0.15.0</title>
+        <title>convert_to_meshes - ARCADE Collection 0.16.0</title>
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@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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@@ -147,7 +147,7 @@
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-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.convert.convert_to_projection.html b/_summary/arcade_collection.convert.convert_to_projection.html
index 6531351..7990a95 100644
--- a/_summary/arcade_collection.convert.convert_to_projection.html
+++ b/_summary/arcade_collection.convert.convert_to_projection.html
@@ -6,7 +6,7 @@
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>convert_to_projection - ARCADE Collection 0.15.0</title>
+        <title>convert_to_projection - ARCADE Collection 0.16.0</title>
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@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.convert.convert_to_simularium.html b/_summary/arcade_collection.convert.convert_to_simularium.html
index faae6c8..50c6093 100644
--- a/_summary/arcade_collection.convert.convert_to_simularium.html
+++ b/_summary/arcade_collection.convert.convert_to_simularium.html
@@ -6,7 +6,7 @@
 <link rel="index" title="Index" href="../genindex.html" /><link rel="search" title="Search" href="../search.html" /><link rel="next" title="convert_to_simularium_objects" href="arcade_collection.convert.convert_to_simularium_objects.html" /><link rel="prev" title="convert_to_projection" href="arcade_collection.convert.convert_to_projection.html" />
 
     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>convert_to_simularium - ARCADE Collection 0.15.0</title>
+        <title>convert_to_simularium - ARCADE Collection 0.16.0</title>
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@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.convert.convert_to_simularium_objects.html b/_summary/arcade_collection.convert.convert_to_simularium_objects.html
index 312fd5d..43a357e 100644
--- a/_summary/arcade_collection.convert.convert_to_simularium_objects.html
+++ b/_summary/arcade_collection.convert.convert_to_simularium_objects.html
@@ -6,7 +6,7 @@
 <link rel="index" title="Index" href="../genindex.html" /><link rel="search" title="Search" href="../search.html" /><link rel="next" title="convert_to_simularium_shapes" href="arcade_collection.convert.convert_to_simularium_shapes.html" /><link rel="prev" title="convert_to_simularium" href="arcade_collection.convert.convert_to_simularium.html" />
 
     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>convert_to_simularium_objects - ARCADE Collection 0.15.0</title>
+        <title>convert_to_simularium_objects - ARCADE Collection 0.16.0</title>
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     <link rel="stylesheet" type="text/css" href="../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
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@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.convert.convert_to_simularium_shapes.html b/_summary/arcade_collection.convert.convert_to_simularium_shapes.html
index 8782ddb..e1d843c 100644
--- a/_summary/arcade_collection.convert.convert_to_simularium_shapes.html
+++ b/_summary/arcade_collection.convert.convert_to_simularium_shapes.html
@@ -6,7 +6,7 @@
 <link rel="index" title="Index" href="../genindex.html" /><link rel="search" title="Search" href="../search.html" /><link rel="next" title="convert_to_tfe" href="arcade_collection.convert.convert_to_tfe.html" /><link rel="prev" title="convert_to_simularium_objects" href="arcade_collection.convert.convert_to_simularium_objects.html" />
 
     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>convert_to_simularium_shapes - ARCADE Collection 0.15.0</title>
+        <title>convert_to_simularium_shapes - ARCADE Collection 0.16.0</title>
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     <link rel="stylesheet" type="text/css" href="../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
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@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.convert.convert_to_tfe.html b/_summary/arcade_collection.convert.convert_to_tfe.html
index 366fd3f..58842e1 100644
--- a/_summary/arcade_collection.convert.convert_to_tfe.html
+++ b/_summary/arcade_collection.convert.convert_to_tfe.html
@@ -6,7 +6,7 @@
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>convert_to_tfe - ARCADE Collection 0.15.0</title>
+        <title>convert_to_tfe - ARCADE Collection 0.16.0</title>
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     <link rel="stylesheet" type="text/css" href="../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
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@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.convert.html b/_summary/arcade_collection.convert.html
index 4e1f614..e04bff4 100644
--- a/_summary/arcade_collection.convert.html
+++ b/_summary/arcade_collection.convert.html
@@ -6,7 +6,7 @@
 <link rel="index" title="Index" href="../genindex.html" /><link rel="search" title="Search" href="../search.html" /><link rel="next" title="convert_to_contours" href="arcade_collection.convert.convert_to_contours.html" /><link rel="prev" title="Installation" href="../index.html" />
 
     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>arcade_collection.convert - ARCADE Collection 0.15.0</title>
+        <title>arcade_collection.convert - ARCADE Collection 0.16.0</title>
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     <link rel="stylesheet" type="text/css" href="../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
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@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
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   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.input.convert_to_cells_file.html b/_summary/arcade_collection.input.convert_to_cells_file.html
index cdde404..72b95db 100644
--- a/_summary/arcade_collection.input.convert_to_cells_file.html
+++ b/_summary/arcade_collection.input.convert_to_cells_file.html
@@ -6,7 +6,7 @@
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>convert_to_cells_file - ARCADE Collection 0.15.0</title>
+        <title>convert_to_cells_file - ARCADE Collection 0.16.0</title>
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@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.input.convert_to_locations_file.html b/_summary/arcade_collection.input.convert_to_locations_file.html
index d11b6d7..bf42b38 100644
--- a/_summary/arcade_collection.input.convert_to_locations_file.html
+++ b/_summary/arcade_collection.input.convert_to_locations_file.html
@@ -6,7 +6,7 @@
 <link rel="index" title="Index" href="../genindex.html" /><link rel="search" title="Search" href="../search.html" /><link rel="next" title="generate_setup_file" href="arcade_collection.input.generate_setup_file.html" /><link rel="prev" title="convert_to_cells_file" href="arcade_collection.input.convert_to_cells_file.html" />
 
     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>convert_to_locations_file - ARCADE Collection 0.15.0</title>
+        <title>convert_to_locations_file - ARCADE Collection 0.16.0</title>
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@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.input.generate_setup_file.html b/_summary/arcade_collection.input.generate_setup_file.html
index e14c0d5..5be75ba 100644
--- a/_summary/arcade_collection.input.generate_setup_file.html
+++ b/_summary/arcade_collection.input.generate_setup_file.html
@@ -6,7 +6,7 @@
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>generate_setup_file - ARCADE Collection 0.15.0</title>
+        <title>generate_setup_file - ARCADE Collection 0.16.0</title>
       <link rel="stylesheet" type="text/css" href="../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
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@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
     </div>
     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.input.group_template_conditions.html b/_summary/arcade_collection.input.group_template_conditions.html
index b218547..9371794 100644
--- a/_summary/arcade_collection.input.group_template_conditions.html
+++ b/_summary/arcade_collection.input.group_template_conditions.html
@@ -6,7 +6,7 @@
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     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>group_template_conditions - ARCADE Collection 0.15.0</title>
+        <title>group_template_conditions - ARCADE Collection 0.16.0</title>
       <link rel="stylesheet" type="text/css" href="../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
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@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.input.html b/_summary/arcade_collection.input.html
index 92841de..f342374 100644
--- a/_summary/arcade_collection.input.html
+++ b/_summary/arcade_collection.input.html
@@ -6,7 +6,7 @@
 <link rel="index" title="Index" href="../genindex.html" /><link rel="search" title="Search" href="../search.html" /><link rel="next" title="convert_to_cells_file" href="arcade_collection.input.convert_to_cells_file.html" /><link rel="prev" title="convert_to_tfe" href="arcade_collection.convert.convert_to_tfe.html" />
 
     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>arcade_collection.input - ARCADE Collection 0.15.0</title>
+        <title>arcade_collection.input - ARCADE Collection 0.16.0</title>
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@@ -124,7 +124,7 @@
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     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
     </div>
     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.input.merge_region_samples.html b/_summary/arcade_collection.input.merge_region_samples.html
index a551564..b2a0a9a 100644
--- a/_summary/arcade_collection.input.merge_region_samples.html
+++ b/_summary/arcade_collection.input.merge_region_samples.html
@@ -6,7 +6,7 @@
 <link rel="index" title="Index" href="../genindex.html" /><link rel="search" title="Search" href="../search.html" /><link rel="next" title="arcade_collection.output" href="arcade_collection.output.html" /><link rel="prev" title="group_template_conditions" href="arcade_collection.input.group_template_conditions.html" />
 
     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>merge_region_samples - ARCADE Collection 0.15.0</title>
+        <title>merge_region_samples - ARCADE Collection 0.16.0</title>
       <link rel="stylesheet" type="text/css" href="../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
     <link rel="stylesheet" type="text/css" href="../_static/copybutton.css" />
@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
     </div>
     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.output.convert_model_units.html b/_summary/arcade_collection.output.convert_model_units.html
index 263aa29..6b02d37 100644
--- a/_summary/arcade_collection.output.convert_model_units.html
+++ b/_summary/arcade_collection.output.convert_model_units.html
@@ -6,7 +6,7 @@
 <link rel="index" title="Index" href="../genindex.html" /><link rel="search" title="Search" href="../search.html" /><link rel="next" title="extract_tick_json" href="arcade_collection.output.extract_tick_json.html" /><link rel="prev" title="arcade_collection.output" href="arcade_collection.output.html" />
 
     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>convert_model_units - ARCADE Collection 0.15.0</title>
+        <title>convert_model_units - ARCADE Collection 0.16.0</title>
       <link rel="stylesheet" type="text/css" href="../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
     <link rel="stylesheet" type="text/css" href="../_static/copybutton.css" />
@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
     </div>
     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.output.extract_tick_json.html b/_summary/arcade_collection.output.extract_tick_json.html
index a9b75ec..8ccabe4 100644
--- a/_summary/arcade_collection.output.extract_tick_json.html
+++ b/_summary/arcade_collection.output.extract_tick_json.html
@@ -6,7 +6,7 @@
 <link rel="index" title="Index" href="../genindex.html" /><link rel="search" title="Search" href="../search.html" /><link rel="next" title="get_location_voxels" href="arcade_collection.output.get_location_voxels.html" /><link rel="prev" title="convert_model_units" href="arcade_collection.output.convert_model_units.html" />
 
     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>extract_tick_json - ARCADE Collection 0.15.0</title>
+        <title>extract_tick_json - ARCADE Collection 0.16.0</title>
       <link rel="stylesheet" type="text/css" href="../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
     <link rel="stylesheet" type="text/css" href="../_static/copybutton.css" />
@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
     </div>
     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.output.get_location_voxels.html b/_summary/arcade_collection.output.get_location_voxels.html
index 7468ee8..0143eff 100644
--- a/_summary/arcade_collection.output.get_location_voxels.html
+++ b/_summary/arcade_collection.output.get_location_voxels.html
@@ -6,7 +6,7 @@
 <link rel="index" title="Index" href="../genindex.html" /><link rel="search" title="Search" href="../search.html" /><link rel="next" title="parse_cells_file" href="arcade_collection.output.parse_cells_file.html" /><link rel="prev" title="extract_tick_json" href="arcade_collection.output.extract_tick_json.html" />
 
     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>get_location_voxels - ARCADE Collection 0.15.0</title>
+        <title>get_location_voxels - ARCADE Collection 0.16.0</title>
       <link rel="stylesheet" type="text/css" href="../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
     <link rel="stylesheet" type="text/css" href="../_static/copybutton.css" />
@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
     </div>
     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.output.html b/_summary/arcade_collection.output.html
index 77a5f83..ded80f6 100644
--- a/_summary/arcade_collection.output.html
+++ b/_summary/arcade_collection.output.html
@@ -6,7 +6,7 @@
 <link rel="index" title="Index" href="../genindex.html" /><link rel="search" title="Search" href="../search.html" /><link rel="next" title="convert_model_units" href="arcade_collection.output.convert_model_units.html" /><link rel="prev" title="merge_region_samples" href="arcade_collection.input.merge_region_samples.html" />
 
     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>arcade_collection.output - ARCADE Collection 0.15.0</title>
+        <title>arcade_collection.output - ARCADE Collection 0.16.0</title>
       <link rel="stylesheet" type="text/css" href="../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
     <link rel="stylesheet" type="text/css" href="../_static/copybutton.css" />
@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
     </div>
     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.output.parse_cells_file.html b/_summary/arcade_collection.output.parse_cells_file.html
index 08d87bf..be12bf1 100644
--- a/_summary/arcade_collection.output.parse_cells_file.html
+++ b/_summary/arcade_collection.output.parse_cells_file.html
@@ -6,7 +6,7 @@
 <link rel="index" title="Index" href="../genindex.html" /><link rel="search" title="Search" href="../search.html" /><link rel="next" title="parse_growth_file" href="arcade_collection.output.parse_growth_file.html" /><link rel="prev" title="get_location_voxels" href="arcade_collection.output.get_location_voxels.html" />
 
     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>parse_cells_file - ARCADE Collection 0.15.0</title>
+        <title>parse_cells_file - ARCADE Collection 0.16.0</title>
       <link rel="stylesheet" type="text/css" href="../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
     <link rel="stylesheet" type="text/css" href="../_static/copybutton.css" />
@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
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     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.output.parse_growth_file.html b/_summary/arcade_collection.output.parse_growth_file.html
index 209bc84..e8da386 100644
--- a/_summary/arcade_collection.output.parse_growth_file.html
+++ b/_summary/arcade_collection.output.parse_growth_file.html
@@ -6,7 +6,7 @@
 <link rel="index" title="Index" href="../genindex.html" /><link rel="search" title="Search" href="../search.html" /><link rel="next" title="parse_locations_file" href="arcade_collection.output.parse_locations_file.html" /><link rel="prev" title="parse_cells_file" href="arcade_collection.output.parse_cells_file.html" />
 
     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>parse_growth_file - ARCADE Collection 0.15.0</title>
+        <title>parse_growth_file - ARCADE Collection 0.16.0</title>
       <link rel="stylesheet" type="text/css" href="../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
     <link rel="stylesheet" type="text/css" href="../_static/copybutton.css" />
@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
     </div>
     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/_summary/arcade_collection.output.parse_locations_file.html b/_summary/arcade_collection.output.parse_locations_file.html
index 4cc0664..09b89aa 100644
--- a/_summary/arcade_collection.output.parse_locations_file.html
+++ b/_summary/arcade_collection.output.parse_locations_file.html
@@ -6,7 +6,7 @@
 <link rel="index" title="Index" href="../genindex.html" /><link rel="search" title="Search" href="../search.html" /><link rel="next" title="Changelog" href="../changelog.html" /><link rel="prev" title="parse_growth_file" href="arcade_collection.output.parse_growth_file.html" />
 
     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>parse_locations_file - ARCADE Collection 0.15.0</title>
+        <title>parse_locations_file - ARCADE Collection 0.16.0</title>
       <link rel="stylesheet" type="text/css" href="../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
     <link rel="stylesheet" type="text/css" href="../_static/copybutton.css" />
@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="../index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
     </div>
     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
diff --git a/changelog.html b/changelog.html
index 47a66d1..49733bf 100644
--- a/changelog.html
+++ b/changelog.html
@@ -6,7 +6,7 @@
 <link rel="index" title="Index" href="genindex.html" /><link rel="search" title="Search" href="search.html" /><link rel="prev" title="parse_locations_file" href="_summary/arcade_collection.output.parse_locations_file.html" />
 
     <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>Changelog - ARCADE Collection 0.15.0</title>
+        <title>Changelog - ARCADE Collection 0.16.0</title>
       <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
     <link rel="stylesheet" type="text/css" href="_static/copybutton.css" />
@@ -124,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.15.0</div></a>
+      <a href="index.html"><div class="brand"><strong>ARCADE Collection</strong> <br />0.16.0</div></a>
     </div>
     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -147,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="index.html">
   
   
-  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.15.0</span>
+  <span class="sidebar-brand-text"><strong>ARCADE Collection</strong> <br />0.16.0</span>
   
 </a><form class="sidebar-search-container" method="get" action="search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
@@ -230,6 +230,30 @@
         <article role="main">
           <section id="changelog">
 <h1>Changelog<a class="headerlink" href="#changelog" title="Permalink to this heading">#</a></h1>
+<section id="v0-16-0-2024-09-25">
+<h2><a class="reference external" href="https://github.com/bagherilab/arcade-collection/releases/tag/v0.16.0">v0.16.0</a> - 2024-09-25<a class="headerlink" href="#v0-16-0-2024-09-25" title="Permalink to this heading">#</a></h2>
+<blockquote>
+<div><p>Compare with <a class="reference external" href="https://github.com/bagherilab/arcade-collection/compare/v0.15.0...v0.16.0">v0.15.0</a></p>
+</div></blockquote>
+<section id="tests">
+<h3>Tests<a class="headerlink" href="#tests" title="Permalink to this heading">#</a></h3>
+<ul class="simple">
+<li><p>Add unit tests for arcade collection input tasks by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/78">#78</a></p></li>
+<li><p>Add unit tests for arcade collection output tasks by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/79">#79</a></p></li>
+<li><p>Add unit tests for arcade collection convert tasks by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/80">#80</a></p></li>
+</ul>
+</section>
+<section id="admin">
+<h3>Admin<a class="headerlink" href="#admin" title="Permalink to this heading">#</a></h3>
+<ul class="simple">
+<li><p>Fix release workflow by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/75">#75</a></p></li>
+<li><p>Update workflow action versions and badges by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/76">#76</a></p></li>
+<li><p>Bump dependency versions by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/77">#77</a></p></li>
+<li><p>Bump dependency versions and clean up docstrings by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/81">#81</a></p></li>
+<li><p>Update dependency requirements to work with other collections by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/82">#82</a></p></li>
+</ul>
+</section>
+</section>
 <section id="v0-15-0-2024-03-01">
 <h2><a class="reference external" href="https://github.com/bagherilab/arcade-collection/releases/tag/v0.15.0">v0.15.0</a> - 2024-03-01<a class="headerlink" href="#v0-15-0-2024-03-01" title="Permalink to this heading">#</a></h2>
 <blockquote>
@@ -241,8 +265,8 @@ <h3>Features<a class="headerlink" href="#features" title="Permalink to this head
 <li><p>Update convert model units to infer model resolution by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/72">#72</a></p></li>
 </ul>
 </section>
-<section id="admin">
-<h3>Admin<a class="headerlink" href="#admin" title="Permalink to this heading">#</a></h3>
+<section id="id1">
+<h3>Admin<a class="headerlink" href="#id1" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Bump dependency versions by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/73">#73</a></p></li>
 </ul>
@@ -253,8 +277,8 @@ <h2><a class="reference external" href="https://github.com/bagherilab/arcade-col
 <blockquote>
 <div><p>Compare with <a class="reference external" href="https://github.com/bagherilab/arcade-collection/compare/v0.13.0...v0.14.0">v0.13.0</a></p>
 </div></blockquote>
-<section id="id1">
-<h3>Features<a class="headerlink" href="#id1" title="Permalink to this heading">#</a></h3>
+<section id="id2">
+<h3>Features<a class="headerlink" href="#id2" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Add get voxel contours task by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/70">#70</a></p></li>
 </ul>
@@ -271,8 +295,8 @@ <h2><a class="reference external" href="https://github.com/bagherilab/arcade-col
 <blockquote>
 <div><p>Compare with <a class="reference external" href="https://github.com/bagherilab/arcade-collection/compare/v0.12.0...v0.13.0">v0.12.0</a></p>
 </div></blockquote>
-<section id="id2">
-<h3>Features<a class="headerlink" href="#id2" title="Permalink to this heading">#</a></h3>
+<section id="id3">
+<h3>Features<a class="headerlink" href="#id3" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Separate convert to simularium tasks for objects and shapes by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/67">#67</a></p></li>
 </ul>
@@ -283,8 +307,8 @@ <h2><a class="reference external" href="https://github.com/bagherilab/arcade-col
 <blockquote>
 <div><p>Compare with <a class="reference external" href="https://github.com/bagherilab/arcade-collection/compare/v0.11.0...v0.12.0">v0.11.0</a></p>
 </div></blockquote>
-<section id="id3">
-<h3>Features<a class="headerlink" href="#id3" title="Permalink to this heading">#</a></h3>
+<section id="id4">
+<h3>Features<a class="headerlink" href="#id4" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Update convert to simularium task for patch simulations by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/63">#63</a></p></li>
 <li><p>Update convert to projection task to use contours by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/64">#64</a></p></li>
@@ -297,8 +321,8 @@ <h3>Documentation<a class="headerlink" href="#documentation" title="Permalink to
 <li><p>Add convert tasks to module reference by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/65">#65</a></p></li>
 </ul>
 </section>
-<section id="id4">
-<h3>Admin<a class="headerlink" href="#id4" title="Permalink to this heading">#</a></h3>
+<section id="id5">
+<h3>Admin<a class="headerlink" href="#id5" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Move convert tasks into convert package by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/62">#62</a></p></li>
 </ul>
@@ -309,14 +333,14 @@ <h2><a class="reference external" href="https://github.com/bagherilab/arcade-col
 <blockquote>
 <div><p>Compare with <a class="reference external" href="https://github.com/bagherilab/arcade-collection/compare/v0.10.0...v0.11.0">v0.10.0</a></p>
 </div></blockquote>
-<section id="id5">
-<h3>Features<a class="headerlink" href="#id5" title="Permalink to this heading">#</a></h3>
+<section id="id6">
+<h3>Features<a class="headerlink" href="#id6" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Add task for converting to projection format by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/59">#59</a></p></li>
 </ul>
 </section>
-<section id="id6">
-<h3>Bug fixes<a class="headerlink" href="#id6" title="Permalink to this heading">#</a></h3>
+<section id="id7">
+<h3>Bug fixes<a class="headerlink" href="#id7" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Fix get location voxels return type by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/60">#60</a></p></li>
 </ul>
@@ -327,14 +351,14 @@ <h2><a class="reference external" href="https://github.com/bagherilab/arcade-col
 <blockquote>
 <div><p>Compare with <a class="reference external" href="https://github.com/bagherilab/arcade-collection/compare/v0.9.3...v0.10.0">v0.9.3</a></p>
 </div></blockquote>
-<section id="id7">
-<h3>Features<a class="headerlink" href="#id7" title="Permalink to this heading">#</a></h3>
+<section id="id8">
+<h3>Features<a class="headerlink" href="#id8" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Update convert to simularium task to display meshes by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/57">#57</a></p></li>
 </ul>
 </section>
-<section id="id8">
-<h3>Admin<a class="headerlink" href="#id8" title="Permalink to this heading">#</a></h3>
+<section id="id9">
+<h3>Admin<a class="headerlink" href="#id9" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Update build workflow to get results across matrix by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/56">#56</a></p></li>
 </ul>
@@ -345,8 +369,8 @@ <h2><a class="reference external" href="https://github.com/bagherilab/arcade-col
 <blockquote>
 <div><p>Compare with <a class="reference external" href="https://github.com/bagherilab/arcade-collection/compare/v0.9.2...v0.9.3">v0.9.2</a></p>
 </div></blockquote>
-<section id="id9">
-<h3>Admin<a class="headerlink" href="#id9" title="Permalink to this heading">#</a></h3>
+<section id="id10">
+<h3>Admin<a class="headerlink" href="#id10" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Fix workflow badge steps by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/54">#54</a></p></li>
 </ul>
@@ -357,8 +381,8 @@ <h2><a class="reference external" href="https://github.com/bagherilab/arcade-col
 <blockquote>
 <div><p>Compare with <a class="reference external" href="https://github.com/bagherilab/arcade-collection/compare/v0.9.1...v0.9.2">v0.9.1</a></p>
 </div></blockquote>
-<section id="id10">
-<h3>Admin<a class="headerlink" href="#id10" title="Permalink to this heading">#</a></h3>
+<section id="id11">
+<h3>Admin<a class="headerlink" href="#id11" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Update workflow permissions and badges by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/52">#52</a></p></li>
 </ul>
@@ -369,20 +393,20 @@ <h2><a class="reference external" href="https://github.com/bagherilab/arcade-col
 <blockquote>
 <div><p>Compare with <a class="reference external" href="https://github.com/bagherilab/arcade-collection/compare/v0.9.0...v0.9.1">v0.9.0</a></p>
 </div></blockquote>
-<section id="id11">
-<h3>Bug fixes<a class="headerlink" href="#id11" title="Permalink to this heading">#</a></h3>
+<section id="id12">
+<h3>Bug fixes<a class="headerlink" href="#id12" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Remove extract feature bins task by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/48">#48</a></p></li>
 </ul>
 </section>
-<section id="id12">
-<h3>Documentation<a class="headerlink" href="#id12" title="Permalink to this heading">#</a></h3>
+<section id="id13">
+<h3>Documentation<a class="headerlink" href="#id13" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Add module docstrings by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/49">#49</a></p></li>
 </ul>
 </section>
-<section id="id13">
-<h3>Admin<a class="headerlink" href="#id13" title="Permalink to this heading">#</a></h3>
+<section id="id14">
+<h3>Admin<a class="headerlink" href="#id14" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Update publish workflow to use trusted publisher by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/50">#50</a></p></li>
 </ul>
@@ -393,8 +417,8 @@ <h2><a class="reference external" href="https://github.com/bagherilab/arcade-col
 <blockquote>
 <div><p>Compare with <a class="reference external" href="https://github.com/bagherilab/arcade-collection/compare/v0.8.1...v0.9.0">v0.8.1</a></p>
 </div></blockquote>
-<section id="id14">
-<h3>Features<a class="headerlink" href="#id14" title="Permalink to this heading">#</a></h3>
+<section id="id15">
+<h3>Features<a class="headerlink" href="#id15" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Add resolution to convert to simularium task by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/44">#44</a></p></li>
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@@ -407,14 +431,14 @@ <h2><a class="reference external" href="https://github.com/bagherilab/arcade-col
 <blockquote>
 <div><p>Compare with <a class="reference external" href="https://github.com/bagherilab/arcade-collection/compare/v0.8.0...v0.8.1">v0.8.0</a></p>
 </div></blockquote>
-<section id="id15">
-<h3>Documentation<a class="headerlink" href="#id15" title="Permalink to this heading">#</a></h3>
+<section id="id16">
+<h3>Documentation<a class="headerlink" href="#id16" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Update autogenerated documentation by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/41">#41</a></p></li>
 </ul>
 </section>
-<section id="id16">
-<h3>Admin<a class="headerlink" href="#id16" title="Permalink to this heading">#</a></h3>
+<section id="id17">
+<h3>Admin<a class="headerlink" href="#id17" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Update lock file version by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/37">#37</a></p></li>
 <li><p>Bump starlette from 0.25.0 to 0.27.0 by <a class="reference external" href="https://github.com/dependabot%5Bbot%5D">&#64;dependabot[bot]</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/39">#39</a></p></li>
@@ -429,8 +453,8 @@ <h2><a class="reference external" href="https://github.com/bagherilab/arcade-col
 <blockquote>
 <div><p>Compare with <a class="reference external" href="https://github.com/bagherilab/arcade-collection/compare/v0.7.2...v0.8.0">v0.7.2</a></p>
 </div></blockquote>
-<section id="id17">
-<h3>Features<a class="headerlink" href="#id17" title="Permalink to this heading">#</a></h3>
+<section id="id18">
+<h3>Features<a class="headerlink" href="#id18" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Add separate option to convert to images task by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/35">#35</a></p></li>
 </ul>
@@ -441,8 +465,8 @@ <h2><a class="reference external" href="https://github.com/bagherilab/arcade-col
 <blockquote>
 <div><p>Compare with <a class="reference external" href="https://github.com/bagherilab/arcade-collection/compare/v0.7.1...v0.7.2">v0.7.1</a></p>
 </div></blockquote>
-<section id="id18">
-<h3>Admin<a class="headerlink" href="#id18" title="Permalink to this heading">#</a></h3>
+<section id="id19">
+<h3>Admin<a class="headerlink" href="#id19" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Add task decorator to init imports by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/32">#32</a></p></li>
 <li><p>Update pyproject.toml and dependencies by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/33">#33</a></p></li>
@@ -454,14 +478,14 @@ <h2><a class="reference external" href="https://github.com/bagherilab/arcade-col
 <blockquote>
 <div><p>Compare with <a class="reference external" href="https://github.com/bagherilab/arcade-collection/compare/v0.7.0...v0.7.1">v0.7.0</a></p>
 </div></blockquote>
-<section id="id19">
-<h3>Bug fixes<a class="headerlink" href="#id19" title="Permalink to this heading">#</a></h3>
+<section id="id20">
+<h3>Bug fixes<a class="headerlink" href="#id20" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Fix init import to exclude all double underscore files by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/29">#29</a></p></li>
 </ul>
 </section>
-<section id="id20">
-<h3>Admin<a class="headerlink" href="#id20" title="Permalink to this heading">#</a></h3>
+<section id="id21">
+<h3>Admin<a class="headerlink" href="#id21" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Update adding task decorator to init imports by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/30">#30</a></p></li>
 </ul>
@@ -472,8 +496,8 @@ <h2><a class="reference external" href="https://github.com/bagherilab/arcade-col
 <blockquote>
 <div><p>Compare with <a class="reference external" href="https://github.com/bagherilab/arcade-collection/compare/v0.6.2...v0.7.0">v0.6.2</a></p>
 </div></blockquote>
-<section id="id21">
-<h3>Admin<a class="headerlink" href="#id21" title="Permalink to this heading">#</a></h3>
+<section id="id22">
+<h3>Admin<a class="headerlink" href="#id22" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Move prefect task decorator to init by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/26">#26</a></p></li>
 <li><p>Add changelog and update actions by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/25">#25</a></p></li>
@@ -486,8 +510,8 @@ <h2><a class="reference external" href="https://github.com/bagherilab/arcade-col
 <blockquote>
 <div><p>Compare with <a class="reference external" href="https://github.com/bagherilab/arcade-collection/compare/v0.6.1...v0.6.2">v0.6.1</a></p>
 </div></blockquote>
-<section id="id22">
-<h3>Bug fixes<a class="headerlink" href="#id22" title="Permalink to this heading">#</a></h3>
+<section id="id23">
+<h3>Bug fixes<a class="headerlink" href="#id23" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Add check for zero regions by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/23">#23</a></p></li>
 </ul>
@@ -498,8 +522,8 @@ <h2><a class="reference external" href="https://github.com/bagherilab/arcade-col
 <blockquote>
 <div><p>Compare with <a class="reference external" href="https://github.com/bagherilab/arcade-collection/compare/v0.6.0...v0.6.1">v0.6.0</a></p>
 </div></blockquote>
-<section id="id23">
-<h3>Features<a class="headerlink" href="#id23" title="Permalink to this heading">#</a></h3>
+<section id="id24">
+<h3>Features<a class="headerlink" href="#id24" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Upgrade prefect and update dependencies by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/21">#21</a></p></li>
 </ul>
@@ -510,14 +534,14 @@ <h2><a class="reference external" href="https://github.com/bagherilab/arcade-col
 <blockquote>
 <div><p>Compare with <a class="reference external" href="https://github.com/bagherilab/arcade-collection/compare/v0.5.0...v0.6.0">v0.5.0</a></p>
 </div></blockquote>
-<section id="id24">
-<h3>Features<a class="headerlink" href="#id24" title="Permalink to this heading">#</a></h3>
+<section id="id25">
+<h3>Features<a class="headerlink" href="#id25" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Add convert format tasks by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/18">#18</a></p></li>
 </ul>
 </section>
-<section id="id25">
-<h3>Bug fixes<a class="headerlink" href="#id25" title="Permalink to this heading">#</a></h3>
+<section id="id26">
+<h3>Bug fixes<a class="headerlink" href="#id26" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Fix type hints by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/19">#19</a></p></li>
 </ul>
@@ -528,14 +552,14 @@ <h2><a class="reference external" href="https://github.com/bagherilab/arcade-col
 <blockquote>
 <div><p>Compare with <a class="reference external" href="https://github.com/bagherilab/arcade-collection/compare/v0.4.0...v0.5.0">v0.4.0</a></p>
 </div></blockquote>
-<section id="id26">
-<h3>Features<a class="headerlink" href="#id26" title="Permalink to this heading">#</a></h3>
+<section id="id27">
+<h3>Features<a class="headerlink" href="#id27" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Add convert units task by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/16">#16</a></p></li>
 </ul>
 </section>
-<section id="id27">
-<h3>Bug fixes<a class="headerlink" href="#id27" title="Permalink to this heading">#</a></h3>
+<section id="id28">
+<h3>Bug fixes<a class="headerlink" href="#id28" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Update import sorting for all tasks by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/15">#15</a></p></li>
 </ul>
@@ -546,15 +570,15 @@ <h2><a class="reference external" href="https://github.com/bagherilab/arcade-col
 <blockquote>
 <div><p>Compare with <a class="reference external" href="https://github.com/bagherilab/arcade-collection/compare/v0.3.0...v0.4.0">v0.3.0</a></p>
 </div></blockquote>
-<section id="id28">
-<h3>Features<a class="headerlink" href="#id28" title="Permalink to this heading">#</a></h3>
+<section id="id29">
+<h3>Features<a class="headerlink" href="#id29" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Add extract tick json task by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/7">#7</a></p></li>
 <li><p>Add get location voxels task by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/8">#8</a></p></li>
 </ul>
 </section>
-<section id="id29">
-<h3>Documentation<a class="headerlink" href="#id29" title="Permalink to this heading">#</a></h3>
+<section id="id30">
+<h3>Documentation<a class="headerlink" href="#id30" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Add types to group template conditions task by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/9">#9</a></p></li>
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 <blockquote>
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-<section id="id30">
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+<section id="id31">
+<h3>Features<a class="headerlink" href="#id31" title="Permalink to this heading">#</a></h3>
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-<section id="id31">
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+<section id="id32">
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-<section id="id32">
-<h3>Features<a class="headerlink" href="#id32" title="Permalink to this heading">#</a></h3>
+<section id="id33">
+<h3>Features<a class="headerlink" href="#id33" title="Permalink to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Add group template conditions task by <a class="reference external" href="https://github.com/jessicasyu">&#64;jessicasyu</a> in <a class="reference external" href="https://github.com/bagherilab/arcade-collection/pull/1">#1</a></p></li>
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           <div class="toc-tree">
             <ul>
 <li><a class="reference internal" href="#">Changelog</a><ul>
+<li><a class="reference internal" href="#v0-16-0-2024-09-25">v0.16.0 - 2024-09-25</a><ul>
+<li><a class="reference internal" href="#tests">Tests</a></li>
+<li><a class="reference internal" href="#admin">Admin</a></li>
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 <li><a class="reference internal" href="#v0-15-0-2024-03-01">v0.15.0 - 2024-03-01</a><ul>
 <li><a class="reference internal" href="#features">Features</a></li>
-<li><a class="reference internal" href="#admin">Admin</a></li>
+<li><a class="reference internal" href="#id1">Admin</a></li>
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-<li><a class="reference internal" href="#id1">Features</a></li>
+<li><a class="reference internal" href="#id2">Features</a></li>
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-<li><a class="reference internal" href="#id2">Features</a></li>
+<li><a class="reference internal" href="#id3">Features</a></li>
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-<li><a class="reference internal" href="#id3">Features</a></li>
+<li><a class="reference internal" href="#id4">Features</a></li>
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-<li><a class="reference internal" href="#id4">Admin</a></li>
+<li><a class="reference internal" href="#id5">Admin</a></li>
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-<li><a class="reference internal" href="#id5">Features</a></li>
-<li><a class="reference internal" href="#id6">Bug fixes</a></li>
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-<li><a class="reference internal" href="#id22">Bug fixes</a></li>
+<li><a class="reference internal" href="#id23">Bug fixes</a></li>
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+<li><a class="reference internal" href="#id24">Features</a></li>
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-<li><a class="reference internal" href="#id25">Bug fixes</a></li>
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-<li><a class="reference internal" href="#id27">Bug fixes</a></li>
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\ No newline at end of file
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"arcade_collection.convert.convert_to_images.split_array_chunks"]], "default (meshtype attribute)": [[3, "arcade_collection.convert.convert_to_meshes.MeshType.DEFAULT"]], "inverted (meshtype attribute)": [[3, "arcade_collection.convert.convert_to_meshes.MeshType.INVERTED"]], "max_array_level (in module arcade_collection.convert.convert_to_meshes)": [[3, "arcade_collection.convert.convert_to_meshes.MAX_ARRAY_LEVEL"]], "meshtype (class in arcade_collection.convert.convert_to_meshes)": [[3, "arcade_collection.convert.convert_to_meshes.MeshType"]], "arcade_collection.convert.convert_to_meshes": [[3, "module-arcade_collection.convert.convert_to_meshes"]], "convert_to_meshes() (in module arcade_collection.convert.convert_to_meshes)": [[3, "arcade_collection.convert.convert_to_meshes.convert_to_meshes"]], "make_combined_mesh() (in module arcade_collection.convert.convert_to_meshes)": [[3, "arcade_collection.convert.convert_to_meshes.make_combined_mesh"]], "make_individual_mesh() (in module arcade_collection.convert.convert_to_meshes)": [[3, "arcade_collection.convert.convert_to_meshes.make_individual_mesh"]], "make_mesh_array() (in module arcade_collection.convert.convert_to_meshes)": [[3, "arcade_collection.convert.convert_to_meshes.make_mesh_array"]], "make_mesh_file() (in module arcade_collection.convert.convert_to_meshes)": [[3, "arcade_collection.convert.convert_to_meshes.make_mesh_file"]], "make_mesh_geometry() (in module arcade_collection.convert.convert_to_meshes)": [[3, "arcade_collection.convert.convert_to_meshes.make_mesh_geometry"]], "make_mesh_groups() (in module arcade_collection.convert.convert_to_meshes)": [[3, "arcade_collection.convert.convert_to_meshes.make_mesh_groups"]], "add_frame_scalebar() (in module arcade_collection.convert.convert_to_projection)": [[4, "arcade_collection.convert.convert_to_projection.add_frame_scalebar"]], "add_frame_timestamp() (in module arcade_collection.convert.convert_to_projection)": [[4, "arcade_collection.convert.convert_to_projection.add_frame_timestamp"]], "arcade_collection.convert.convert_to_projection": [[4, "module-arcade_collection.convert.convert_to_projection"]], "convert_to_projection() (in module arcade_collection.convert.convert_to_projection)": [[4, "arcade_collection.convert.convert_to_projection.convert_to_projection"]], "camera_look_at (in module arcade_collection.convert.convert_to_simularium)": [[5, "arcade_collection.convert.convert_to_simularium.CAMERA_LOOK_AT"]], "camera_positions (in module arcade_collection.convert.convert_to_simularium)": [[5, "arcade_collection.convert.convert_to_simularium.CAMERA_POSITIONS"]], "arcade_collection.convert.convert_to_simularium": [[5, "module-arcade_collection.convert.convert_to_simularium"]], "convert_to_simularium() (in module arcade_collection.convert.convert_to_simularium)": [[5, "arcade_collection.convert.convert_to_simularium.convert_to_simularium"]], "get_agent_data() (in module arcade_collection.convert.convert_to_simularium)": [[5, "arcade_collection.convert.convert_to_simularium.get_agent_data"]], "get_display_data() (in module arcade_collection.convert.convert_to_simularium)": [[5, "arcade_collection.convert.convert_to_simularium.get_display_data"]], "get_meta_data() (in module arcade_collection.convert.convert_to_simularium)": [[5, "arcade_collection.convert.convert_to_simularium.get_meta_data"]], "shade_color() (in module arcade_collection.convert.convert_to_simularium)": [[5, "arcade_collection.convert.convert_to_simularium.shade_color"]], "arcade_collection.convert.convert_to_simularium_objects": [[6, "module-arcade_collection.convert.convert_to_simularium_objects"]], "convert_to_simularium_objects() (in module arcade_collection.convert.convert_to_simularium_objects)": [[6, "arcade_collection.convert.convert_to_simularium_objects.convert_to_simularium_objects"]], "format_potts_for_objects() (in module arcade_collection.convert.convert_to_simularium_objects)": [[6, "arcade_collection.convert.convert_to_simularium_objects.format_potts_for_objects"]], "cell_states (in module arcade_collection.convert.convert_to_simularium_shapes)": [[7, "arcade_collection.convert.convert_to_simularium_shapes.CELL_STATES"]], "edge_types (in module arcade_collection.convert.convert_to_simularium_shapes)": [[7, "arcade_collection.convert.convert_to_simularium_shapes.EDGE_TYPES"]], "approximate_radius_from_voxels() (in module arcade_collection.convert.convert_to_simularium_shapes)": [[7, "arcade_collection.convert.convert_to_simularium_shapes.approximate_radius_from_voxels"]], "arcade_collection.convert.convert_to_simularium_shapes": [[7, "module-arcade_collection.convert.convert_to_simularium_shapes"]], "calculate_patch_size() (in module arcade_collection.convert.convert_to_simularium_shapes)": [[7, "arcade_collection.convert.convert_to_simularium_shapes.calculate_patch_size"]], "convert_hexagonal_to_rectangular_coordinates() (in module arcade_collection.convert.convert_to_simularium_shapes)": [[7, "arcade_collection.convert.convert_to_simularium_shapes.convert_hexagonal_to_rectangular_coordinates"]], "convert_to_simularium_shapes() (in module arcade_collection.convert.convert_to_simularium_shapes)": [[7, "arcade_collection.convert.convert_to_simularium_shapes.convert_to_simularium_shapes"]], "filter_border_voxels() (in module arcade_collection.convert.convert_to_simularium_shapes)": [[7, "arcade_collection.convert.convert_to_simularium_shapes.filter_border_voxels"]], "format_patch_for_shapes() (in module arcade_collection.convert.convert_to_simularium_shapes)": [[7, "arcade_collection.convert.convert_to_simularium_shapes.format_patch_for_shapes"]], "format_potts_for_shapes() (in module arcade_collection.convert.convert_to_simularium_shapes)": [[7, "arcade_collection.convert.convert_to_simularium_shapes.format_potts_for_shapes"]], "get_resolution_voxels() (in module arcade_collection.convert.convert_to_simularium_shapes)": [[7, "arcade_collection.convert.convert_to_simularium_shapes.get_resolution_voxels"]], "arcade_collection.convert.convert_to_tfe": [[8, "module-arcade_collection.convert.convert_to_tfe"]], "convert_to_tfe() (in module arcade_collection.convert.convert_to_tfe)": [[8, "arcade_collection.convert.convert_to_tfe.convert_to_tfe"]], "get_feature_from_data() (in module arcade_collection.convert.convert_to_tfe)": [[8, "arcade_collection.convert.convert_to_tfe.get_feature_from_data"]], "get_manifest_data() (in module arcade_collection.convert.convert_to_tfe)": [[8, "arcade_collection.convert.convert_to_tfe.get_manifest_data"]], "get_times_from_data() (in module arcade_collection.convert.convert_to_tfe)": [[8, "arcade_collection.convert.convert_to_tfe.get_times_from_data"]], "get_tracks_from_data() (in module arcade_collection.convert.convert_to_tfe)": [[8, "arcade_collection.convert.convert_to_tfe.get_tracks_from_data"]], "arcade_collection.input": [[9, "module-arcade_collection.input"]], "arcade_collection.input.convert_to_cells_file": [[10, "module-arcade_collection.input.convert_to_cells_file"]], "convert_to_cell() (in module arcade_collection.input.convert_to_cells_file)": [[10, "arcade_collection.input.convert_to_cells_file.convert_to_cell"]], "convert_to_cell_region() (in module arcade_collection.input.convert_to_cells_file)": [[10, "arcade_collection.input.convert_to_cells_file.convert_to_cell_region"]], "convert_to_cells_file() (in module arcade_collection.input.convert_to_cells_file)": [[10, "arcade_collection.input.convert_to_cells_file.convert_to_cells_file"]], "convert_value_distribution() (in module arcade_collection.input.convert_to_cells_file)": [[10, "arcade_collection.input.convert_to_cells_file.convert_value_distribution"]], "filter_cell_reference() (in module arcade_collection.input.convert_to_cells_file)": [[10, "arcade_collection.input.convert_to_cells_file.filter_cell_reference"]], "get_cell_state() (in module arcade_collection.input.convert_to_cells_file)": [[10, "arcade_collection.input.convert_to_cells_file.get_cell_state"]], "arcade_collection.input.convert_to_locations_file": [[11, "module-arcade_collection.input.convert_to_locations_file"]], "convert_to_location() (in module arcade_collection.input.convert_to_locations_file)": [[11, "arcade_collection.input.convert_to_locations_file.convert_to_location"]], "convert_to_locations_file() (in module arcade_collection.input.convert_to_locations_file)": [[11, "arcade_collection.input.convert_to_locations_file.convert_to_locations_file"]], "get_center_voxel() (in module arcade_collection.input.convert_to_locations_file)": [[11, "arcade_collection.input.convert_to_locations_file.get_center_voxel"]], "get_location_voxels() (in module arcade_collection.input.convert_to_locations_file)": [[11, "arcade_collection.input.convert_to_locations_file.get_location_voxels"]], "default_population_id (in module arcade_collection.input.generate_setup_file)": [[12, "arcade_collection.input.generate_setup_file.DEFAULT_POPULATION_ID"]], "arcade_collection.input.generate_setup_file": [[12, "module-arcade_collection.input.generate_setup_file"]], "calculate_sample_bounds() (in module arcade_collection.input.generate_setup_file)": [[12, "arcade_collection.input.generate_setup_file.calculate_sample_bounds"]], "generate_setup_file() (in module arcade_collection.input.generate_setup_file)": [[12, "arcade_collection.input.generate_setup_file.generate_setup_file"]], "make_setup_file() (in module arcade_collection.input.generate_setup_file)": [[12, "arcade_collection.input.generate_setup_file.make_setup_file"]], "arcade_collection.input.group_template_conditions": [[13, "module-arcade_collection.input.group_template_conditions"]], "find_seed_ranges() (in module arcade_collection.input.group_template_conditions)": [[13, "arcade_collection.input.group_template_conditions.find_seed_ranges"]], "group_condition_sets() (in module arcade_collection.input.group_template_conditions)": [[13, "arcade_collection.input.group_template_conditions.group_condition_sets"]], "group_seed_ranges() (in module arcade_collection.input.group_template_conditions)": [[13, "arcade_collection.input.group_template_conditions.group_seed_ranges"]], "group_template_conditions() (in module arcade_collection.input.group_template_conditions)": [[13, "arcade_collection.input.group_template_conditions.group_template_conditions"]], "arcade_collection.input.merge_region_samples": [[14, "module-arcade_collection.input.merge_region_samples"]], "filter_valid_samples() (in module arcade_collection.input.merge_region_samples)": [[14, "arcade_collection.input.merge_region_samples.filter_valid_samples"]], "merge_region_samples() (in module arcade_collection.input.merge_region_samples)": [[14, "arcade_collection.input.merge_region_samples.merge_region_samples"]], "transform_sample_coordinates() (in module arcade_collection.input.merge_region_samples)": [[14, "arcade_collection.input.merge_region_samples.transform_sample_coordinates"]], "arcade_collection.output": [[15, "module-arcade_collection.output"]], "arcade_collection.output.convert_model_units": [[16, "module-arcade_collection.output.convert_model_units"]], "convert_model_units() (in module arcade_collection.output.convert_model_units)": [[16, "arcade_collection.output.convert_model_units.convert_model_units"]], "convert_spatial_units() (in module arcade_collection.output.convert_model_units)": [[16, "arcade_collection.output.convert_model_units.convert_spatial_units"]], "convert_temporal_units() (in module arcade_collection.output.convert_model_units)": [[16, "arcade_collection.output.convert_model_units.convert_temporal_units"]], "estimate_spatial_resolution() (in module arcade_collection.output.convert_model_units)": [[16, "arcade_collection.output.convert_model_units.estimate_spatial_resolution"]], "estimate_temporal_resolution() (in module arcade_collection.output.convert_model_units)": [[16, "arcade_collection.output.convert_model_units.estimate_temporal_resolution"]], "arcade_collection.output.extract_tick_json": [[17, "module-arcade_collection.output.extract_tick_json"]], "extract_tick_json() (in module arcade_collection.output.extract_tick_json)": [[17, "arcade_collection.output.extract_tick_json.extract_tick_json"]], "arcade_collection.output.get_location_voxels": [[18, "module-arcade_collection.output.get_location_voxels"]], "get_location_voxels() (in module arcade_collection.output.get_location_voxels)": [[18, "arcade_collection.output.get_location_voxels.get_location_voxels"]], "cells_columns (in module arcade_collection.output.parse_cells_file)": [[19, "arcade_collection.output.parse_cells_file.CELLS_COLUMNS"]], "arcade_collection.output.parse_cells_file": [[19, "module-arcade_collection.output.parse_cells_file"]], "parse_cell_tick() (in module arcade_collection.output.parse_cells_file)": [[19, "arcade_collection.output.parse_cells_file.parse_cell_tick"]], "parse_cells_file() (in module arcade_collection.output.parse_cells_file)": [[19, "arcade_collection.output.parse_cells_file.parse_cells_file"]], "cell_states (in module arcade_collection.output.parse_growth_file)": [[20, "arcade_collection.output.parse_growth_file.CELL_STATES"]], "growth_columns (in module arcade_collection.output.parse_growth_file)": [[20, "arcade_collection.output.parse_growth_file.GROWTH_COLUMNS"]], "arcade_collection.output.parse_growth_file": [[20, "module-arcade_collection.output.parse_growth_file"]], "parse_growth_file() (in module arcade_collection.output.parse_growth_file)": [[20, "arcade_collection.output.parse_growth_file.parse_growth_file"]], "parse_growth_timepoint() (in module arcade_collection.output.parse_growth_file)": [[20, "arcade_collection.output.parse_growth_file.parse_growth_timepoint"]], "locations_columns (in module arcade_collection.output.parse_locations_file)": [[21, "arcade_collection.output.parse_locations_file.LOCATIONS_COLUMNS"]], "arcade_collection.output.parse_locations_file": [[21, "module-arcade_collection.output.parse_locations_file"]], "parse_location_tick() (in module arcade_collection.output.parse_locations_file)": [[21, "arcade_collection.output.parse_locations_file.parse_location_tick"]], "parse_locations_file() (in module arcade_collection.output.parse_locations_file)": [[21, "arcade_collection.output.parse_locations_file.parse_locations_file"]]}})
\ No newline at end of file