From ac4fdab415519b89f32699cca70fad1390f954e6 Mon Sep 17 00:00:00 2001 From: alorchhota Date: Tue, 6 Nov 2018 11:53:58 -0500 Subject: [PATCH] stringr package removed from requirements --- compute_mappability.R | 1 - prerequisites.md | 2 +- 2 files changed, 1 insertion(+), 2 deletions(-) diff --git a/compute_mappability.R b/compute_mappability.R index 4165fe6..139ebaa 100644 --- a/compute_mappability.R +++ b/compute_mappability.R @@ -4,7 +4,6 @@ ### took an weighted average of both mappabilities. weights are proportional to lengths. suppressMessages(library(data.table)) -suppressMessages(library(stringr)) suppressMessages(library(intervals)) suppressMessages(library(stats)) suppressMessages(library(argparser)) diff --git a/prerequisites.md b/prerequisites.md index a7fcf42..122d4de 100644 --- a/prerequisites.md +++ b/prerequisites.md @@ -61,7 +61,7 @@ Bowtie index files are required to align k-mers to the genome. You may either do - Linux - R - Please make sure the path variable includes the location for `Rscript`. - - Please make sure the following R packages are installed: data.table, stringr, intervals, argparser, stats, + - Please make sure the following R packages are installed: data.table, intervals, argparser, stats, - bowtie v1 - Please make sure the path variable includes the location for `bowtie`.