pyproject.toml

[project]
name = "oncodriveclustl"
dynamic = ["version"]
description = "OncodriveCLUSTL is a clustering method to identify cancer drivers"
authors = [
    { name = "BBGLab (Barcelona Biomedical Genomics Lab)", email = "bbglab@irbbarcelona.org" }
]
dependencies = [
    "bgparsers==0.10",
    "bgreference==0.7",
    "bgsignature==0.2",
    "click==8.1.7",
    "daiquiri==3.2.5.1",
    "intervaltree==3.1.0",
    "matplotlib==3.9.2",
    "numpy==2.0.1",
    "pandas==2.2.2",
    "scikit-learn==1.5.1",
    "scipy==1.14.0",
    "statsmodels==0.14.2",
    "tqdm==4.66.5",
]
readme = "README.md"
requires-python = ">=3.10,<3.13"
license = { file = "LICENSE" }

[project.scripts]
"oncodriveclustl" = "oncodriveclustl.main:main"
"parse_vcf" = "oncodriveclustl.parsers.vcf:vcf_to_tsv"

[build-system]
requires = ["hatchling"]
build-backend = "hatchling.build"

[tool.hatch.version]
path = "oncodriveclustl/__init__.py"

[tool.hatch.metadata]
allow-direct-references = true

[tool.hatch.build.targets.wheel]
packages = ["oncodriveclustl"]