Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Request: pre-built databases for download #810

Open
bheimbu opened this issue May 28, 2024 · 0 comments
Open

Request: pre-built databases for download #810

bheimbu opened this issue May 28, 2024 · 0 comments

Comments

@bheimbu
Copy link

bheimbu commented May 28, 2024

Hi,

it's just an idea but it would be great if some databases like UniRef90 or NCBI's nr could be downloaded in a pre-built manner.

There is https://benlangmead.github.io/aws-indexes/ for Kraken2, which makes it so much more convenient and faster to work with Kraken2, then to wait for days til databases have been downloaded and set up correctly.

Anyway, diamond is a great program (but it takes ages to setup databases),

Cheers Bastian

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

No branches or pull requests

2 participants