diff --git a/deployments/datahub/images/default/requirements.txt.disabled b/deployments/datahub/images/default/requirements.txt.disabled deleted file mode 100644 index 0c69d6921..000000000 --- a/deployments/datahub/images/default/requirements.txt.disabled +++ /dev/null @@ -1,189 +0,0 @@ -# data8; foundation -datascience==0.17.0 -# Until https://github.com/okpy/ok-client/pull/473 is merged -git+https://github.com/yuvipanda/ok-client@6961d778741fe61911be4d00beff9bd8afc1edf7 -folium==0.12.1 -# -# r -jupyter-server-proxy==4.2.0 -jupyter-rsession-proxy==2.0.1 -jupyter-shiny-proxy==1.1 -# -# cogsci88; -ggplot==0.11.5 -# -# cogsci131; spring 2018 -nose==1.3.7 -# -# modules -beautifulsoup4==4.9.3 -# nb2pdf==0.6.2 commented out by sknapp 06.10.2023 to unblock https://github.com/berkeley-dsep-infra/datahub/issues/5062 -# -# ls 88-3; neuro -lxml==4.9.1 -tqdm==4.62.1 -mne==0.23.0 -nibabel==3.2.1 -h5py==3.7.0 -numexpr==2.7.3 -openpyxl==3.0.7 -nilearn==0.8.0 - -# data100, geog88 -# https://github.com/berkeley-dsep-infra/datahub/issues/2838 -geopandas==0.10.* -geopy==2.2.* -pysal==2.5.* -rtree==0.9.* -netcdf4==1.6.* -mplleaflet==0.0.5 -# phys 151; -emcee==3.1.0 -daft==0.1.2 -corner==2.2.1 -# -# ce88; -pymdptoolbox==4.0-b3 -# -# data-x; DL -tensorflow==2.11.1 -scikit-image==0.19.* -tables==3.7.0 -opencv-python==4.6.0.66 - -# astr 128/256; spring 2021 -astroquery==0.4.6 -astropy==5.3.3 -dustmaps==1.0.9 -george==0.4.0 -exoplanet==0.5.2 -torch==1.13.1 -torchvision==0.14.1 -pyvo==1.1 -joblib==1.3.1 -theano-pymc==1.1.2 -pymc3==3.11.2 - -# eep 153; spring 2019 -requests==2.31.0 -Pint==0.17 -# Google spreadsheets, Eric Van Dusen / Keeley Takimoto / Modules -gspread-pandas==2.3.0 -gspread==4.0.1 - -# eps 109; fall 2019 -ffmpeg-python==0.2.0 - -# data 88e; spring 2021 -plotly==5.2.1 -mpmath==1.3.0 -# sympy==1.6.2 -chart-studio==1.1.0 -csaps==1.1.0 -nbforms==0.5.1 - -# issue #875, global 150Q/pacs 190 - fall 2019 -wordcloud==1.8.1 - -# issue #929, SW 282 - fall 2019 -pyreadstat==1.1.2 - -# issue 954, EPS24 - fall 2019 -xarray==0.19.0 - -# issue 1001, Physics 188/288 - fall 2019 -umap-learn==0.5.1 -hdbscan==0.8.31 - -# espm 125/bio 105; fall 2019 -# see https://github.com/berkeley-dsep-infra/datahub/issues/1796 -bitarray==2.3.0 -nlmpy==1.0.1 - -# physics 188/288 fall, 2019 -getdist==1.3.1 -tensorflow-hub==0.12.0 -tensorflow-probability==0.13.0 - -# cs16A/B, spring 2020 -lcapy==0.96 - -# EPS 256, https://github.com/berkeley-dsep-infra/datahub/issues/1775 -obspy==1.3.0 - -# ds198 mch infodemiology, fall 2020/spring 2021 -# google apis -google-api-python-client==2.15.0 -google-auth-httplib2==0.1.0 -google-auth-oauthlib==0.4.5 -google==3.0.0 - -# issue 1847; LS 22 spring 2021 -graphviz==0.17 - -# issue #1903, data h195A fall 2020 -habanero==0.7.4 - -# https://github.com/berkeley-dsep-infra/datahub/issues/1981 -ipycanvas==0.9.0 - -# data100 scientific packages -ray==1.13.* -xlrd==2.0.1 - -# data100 visualization -colorlover==0.3.0 -cufflinks==0.17.3 -altair==4.1.0 - -# data100 tools to access things -tweepy==3.10.0 -pytz==2021.1 -psycopg2==2.9.1 - -# data100 teaching -jassign==0.0.7 -dsassign==0.0.8 - -# data102 -dask==2021.10.0 -distributed==2021.10.0 -keras-applications==1.0.8 -keras-preprocessing==1.1.2 -keras==2.11.0 -keras-vis==0.4.1 -plotly-express==0.4.1 -cytoolz==0.11.0 -pyro-ppl==1.7.0 -lime==0.2.0.1 -shap==0.39.0 - -# prob140 2021 Spring -prob140==0.4.1.5 -sympy==1.8 - -# ESPM 167 - https://github.com/berkeley-dsep-infra/datahub/issues/2278 -contextily==1.1.0 - -# INDENG 142 Spring 2021 (future semesters as well) - https://github.com/berkeley-dsep-infra/datahub/issues/2314 -fancyimpute==0.7.0 - -# JupyterLab pypi extensions -jupyterlab-geojson==3.1.2 - -# IB 105 / ESPM 125, Fall 2021 - https://github.com/berkeley-dsep-infra/datahub/issues/2696 -geonomics==1.3.0 - -# data100, fall 2021 - https://github.com/berkeley-dsep-infra/datahub/issues/2767 -ipython-sql==0.4.0 - -# data100, fall 2021 - https://github.com/berkeley-dsep-infra/datahub/issues/2875 -metpy==1.1.0 -pooch==1.5.2 - -# PS88 https://github.com/berkeley-dsep-infra/datahub/issues/2925 -linearmodels==4.27 - -# https://github.com/berkeley-dsep-infra/datahub/issues/2950 -# Needed to work with a new enough version of httplib2 -httplib2>=0.20.2