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FROM bioconductor/bioconductor_docker
RUN R -e 'install.packages("remotes")'
RUN R -e 'remotes::install_github("bhagwataditya/autonomics/autonomics.data", repos = BiocManager::repositories(), dependencies = TRUE, upgrade = FALSE)'
RUN R -e 'remotes::install_github("bhagwataditya/autonomics/autonomics.support", repos = BiocManager::repositories(), dependencies = TRUE, upgrade = FALSE)'
RUN R -e 'remotes::install_github("bhagwataditya/autonomics/autonomics.annotate", repos = BiocManager::repositories(), dependencies = TRUE, upgrade = FALSE)'
RUN R -e 'remotes::install_github("bhagwataditya/autonomics/autonomics.import", repos = BiocManager::repositories(), dependencies = TRUE, upgrade = FALSE)'
RUN R -e 'remotes::install_github("bhagwataditya/autonomics/autonomics.preprocess", repos = BiocManager::repositories(), dependencies = TRUE, upgrade = FALSE)'
RUN R -e 'remotes::install_github("bhagwataditya/autonomics/autonomics.plot", repos = BiocManager::repositories(), dependencies = TRUE, upgrade = FALSE)'
RUN R -e 'remotes::install_github("bhagwataditya/autonomics/autonomics.find", repos = BiocManager::repositories(), dependencies = TRUE, upgrade = FALSE)'
RUN R -e 'remotes::install_github("bhagwataditya/autonomics/autonomics.ora", repos = BiocManager::repositories(), dependencies = TRUE, upgrade = FALSE)'
RUN R -e 'remotes::install_github("bhagwataditya/autonomics/autonomics.integrate", repos = BiocManager::repositories(), dependencies = TRUE, upgrade = FALSE)'
RUN R -e 'remotes::install_github("bhagwataditya/autonomics/autonomics", repos = BiocManager::repositories(), dependencies = TRUE, upgrade = FALSE)'