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Issues list

The column technology typecannot be before the assay name -- ERROR
#177 by levitsky was closed Oct 11, 2024
1
2
Validation error for enzyme information encoded by fragpipe
#176 by levitsky was closed Oct 8, 2024
1
1
ImprtError on Python 3.12 due to missing pkg_resouces
#175 by levitsky was closed Oct 8, 2024
1
skip OLS query option, only check locally documentation Improvements or additions to documentation enhancement New feature or request
#170 by ypriverol was closed Aug 5, 2024
1
@ypriverol
Report error with validate SDRF if factor value column doesn't correspond to characteristics column
#167 by kai-lawsonmcdowall was closed Jul 30, 2024
1
8
Better error message with SDRF to OpenMS
#166 by ypriverol was closed Jul 30, 2024
1
Error When converting to OpenMS enzymes bug Something isn't working
#164 by ypriverol was closed Apr 6, 2024
1
@ypriverol
Searching for a term found as substring in OLS. enhancement New feature or request high-priority
#161 by ypriverol was closed Feb 28, 2024
1
@ypriverol
OLS search terms pagination error bug Something isn't working high-priority
#160 by ypriverol was closed Feb 28, 2024
2 tasks done
1
@ypriverol
Decide the main developer behind version 0.0.25 in sdrf-pipelines high-priority
#157 by ypriverol was closed Jan 22, 2024
@ypriverol
1
sdrf pipelines version 0.0.25 high-priority
#156 by ypriverol was closed Feb 26, 2025
5 tasks done
@ypriverol
Moving to OLS4 is needed
#151 by ypriverol was closed Oct 19, 2023
1
@ypriverol
OpenMS converter does not handle "cleavage agent" = "not applicable" correctly
#147 by davidecarlson was closed Feb 27, 2024
@ypriverol
20
[Pitch] Partial keep raw in OpenMS
#145 by jspaezp was closed Sep 5, 2023
1
@ypriverol @jpfeuffer @jspaezp
14
Why are these elements private?
#141 by fabianegli was closed Sep 5, 2023
1
1
Unimod and ols error
#137 by ypriverol was closed Feb 27, 2024
@ypriverol
1
[BUG] openms/unimod.py
#130 by fabianegli was closed Sep 5, 2023
1
1
strange method name
#127 by fabianegli was closed Jul 29, 2022
1
1
CI is failing, probably due to resource location change
#126 by fabianegli was closed Jul 29, 2022
3
Access to yml and xml files
#124 by veitveit was closed Jul 29, 2022
1
3
[ENH] Have a "--version" parameter to print versions enhancement New feature or request high-priority
#122 by jpfeuffer was closed Aug 17, 2022
1
5
[SECURITY] Move from xml to defusedxml for XML parsing
#119 by fabianegli was closed Sep 5, 2023
1
1
[ENH] Use logging instead of print enhancement New feature or request help wanted Extra attention is needed
#118 by fabianegli was closed Oct 12, 2023
1
[MAINT] rename master branch to main low-priority
#117 by fabianegli was closed Jan 8, 2024
@fabianegli
3
[QUESTION] What purpose does the validate_sdrfs.sh script have in this repo? help wanted Extra attention is needed question Further information is requested
#110 by fabianegli was closed Apr 5, 2022
1
6
ProTip! Updated in the last three days: updated:>2025-03-09.