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release-please.yml
28 workflow run results
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feat: add CI for a scaled down version of a cancer WES pipeline (#499) release-please #119: Commit b971088 pushed by ericblanc20
April 18, 2024 16:31 53s main
main
April 18, 2024 16:31 53s
fix!: pin dependency version in all wrapper conda env yamls (#492) release-please #118: Commit 79499d9 pushed by ericblanc20
April 18, 2024 15:43 1m 6s main
main
April 18, 2024 15:43 1m 6s
feat: Fixing Mantis (#427) release-please #117: Commit e008e7e pushed by ericblanc20
April 17, 2024 12:11 1m 10s main
main
April 17, 2024 12:11 1m 10s
fix: gcnv wrapper regex curly-brackets parsed by python string format… release-please #116: Commit 8fb40e5 pushed by Nicolai-vKuegelgen
April 15, 2024 14:12 1m 5s main
main
April 15, 2024 14:12 1m 5s
fix: explicitly require gawk in mutect2/filter wrapper environment (#… release-please #115: Commit 6993233 pushed by tedil
April 10, 2024 12:14 1m 3s main
main
April 10, 2024 12:14 1m 3s
fix: remove hard coded contig names from gcnv wrappers (#489 ) (#490) release-please #114: Commit 4b89594 pushed by Nicolai-vKuegelgen
April 8, 2024 11:39 1m 11s main
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April 8, 2024 11:39 1m 11s
fix: fix somatic snappy (#477) (#491) release-please #113: Commit af961cc pushed by ericblanc20
March 20, 2024 12:17 1m 7s main
main
March 20, 2024 12:17 1m 7s
fix: conda env for merge_multikit_families - install attrs package ov… release-please #112: Commit fab3e36 pushed by Nicolai-vKuegelgen
February 7, 2024 12:46 59s main
main
February 7, 2024 12:46 59s
chore: Update versioneer (#485) release-please #111: Commit 89d7c83 pushed by sellth
January 25, 2024 12:39 1m 4s main
main
January 25, 2024 12:39 1m 4s
chore: setting minimal Python version to 3.10 (#484) release-please #110: Commit e1b53de pushed by holtgrewe
January 24, 2024 13:33 1m 7s main
main
January 24, 2024 13:33 1m 7s
feat: replacing custom coverage QC scripts with "alfred qc" (#481) (#… release-please #109: Commit ae8fe98 pushed by holtgrewe
January 22, 2024 16:29 1m 4s main
main
January 22, 2024 16:29 1m 4s
feat: also write out mapping quality bigWig file (#476) (#480) release-please #108: Commit dc1d92b pushed by holtgrewe
January 22, 2024 07:57 1m 2s main
main
January 22, 2024 07:57 1m 2s
feat: bump ngs-chew to v0.9.x (#478) release-please #107: Commit c54bba1 pushed by holtgrewe
January 9, 2024 15:58 1m 34s main
main
January 9, 2024 15:58 1m 34s
feat: use filtered variants in tmb and signatures (#470) release-please #106: Commit 3e3cead pushed by ericblanc20
December 20, 2023 17:01 1m 2s main
main
December 20, 2023 17:01 1m 2s
feat: Initial implementation of Molecular bar codes handling using AG… release-please #105: Commit 768dded pushed by ericblanc20
December 20, 2023 14:21 1m 11s main
main
December 20, 2023 14:21 1m 11s
fix: bump mehari to 0.21.1 fixes effect prediction (#474) release-please #104: Commit c0ba296 pushed by holtgrewe
December 1, 2023 14:59 1m 19s main
main
December 1, 2023 14:59 1m 19s
fix: gcnv contig wrapper scripts do not clean their output folders (#… release-please #103: Commit 618f10d pushed by Nicolai-vKuegelgen
November 29, 2023 15:21 1m 10s main
main
November 29, 2023 15:21 1m 10s
fix: definition of gcnv conda enviroment for mamba>=1.3 (#452) (#454) release-please #102: Commit 50d0781 pushed by Nicolai-vKuegelgen
November 15, 2023 14:18 1m 2s main
main
November 15, 2023 14:18 1m 2s
chore: update mehari version to 0.15.1 (#457) release-please #101: Commit c6efc7d pushed by Nicolai-vKuegelgen
November 15, 2023 14:17 1m 11s main
main
November 15, 2023 14:17 1m 11s
feat: merge gCNV output in case of multi-kit families (#292) (#465) release-please #100: Commit ee64a98 pushed by Nicolai-vKuegelgen
November 15, 2023 08:26 1m 19s main
main
November 15, 2023 08:26 1m 19s
feat: feature-complete end-to-end run of the Becnel dataset on hs37d5… release-please #99: Commit 4874074 pushed by ericblanc20
October 31, 2023 16:39 1m 20s main
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October 31, 2023 16:39 1m 20s
feat: PureCN implementation (#453) release-please #98: Commit e394e8c pushed by ericblanc20
October 11, 2023 14:14 1m 28s main
main
October 11, 2023 14:14 1m 28s
fix: mehari wrapper vcf preprocessing does not actually fix info svle… release-please #97: Commit 55146c7 pushed by Nicolai-vKuegelgen
October 11, 2023 13:18 1m 27s main
main
October 11, 2023 13:18 1m 27s
fix: fix trimadap-mt & bbduk java version (#446) release-please #96: Commit 46b2303 pushed by ericblanc20
September 20, 2023 06:57 1m 6s main
main
September 20, 2023 06:57 1m 6s
feat: bump and fix Mehari for SVs in varfish_export (#444) release-please #95: Commit 0ca23f6 pushed by holtgrewe
September 18, 2023 13:46 1m 0s main
main
September 18, 2023 13:46 1m 0s