diff --git a/environment.yml b/environment.yml index 4a1480c53..2d44f86e9 100644 --- a/environment.yml +++ b/environment.yml @@ -60,7 +60,10 @@ dependencies: # CUBI libraries required by snappy (installed through pip) - pip: - varfish-cli >=0.6.3 -# - biomedsheets >=0.11.7 # 0.11.7 build will fail + # We're trying to keep the PyPi package up to date, you might have to install + # from source, though. + # - biomedsheets >=0.11.7 + # … which is what we do here: - git+https://github.com/bihealth/biomedsheets.git@a355c396b6e6b2f52f96f73d58cd26c3f1f5e18c - pysam >=0.22 - vcfpy >=0.13.8