Merge pull request #95 from bio-ontology-research-group/dependabot/pi…

…p/scipy-lt-1.16.0 Update scipy requirement from <1.15.0 to <1.16.0
bio-ontology-research-group · Jan 19, 2025 · 34333e0 · 34333e0
2 parents 69fa179 + 0bf702b
commit 34333e0
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Showing 12 changed files with 13 additions and 12 deletions.
diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -8,6 +8,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 ## [Unreleased]
 
 ### Changed
+- Upgraded scipy dependency from 1.15.0 to 1.16.0
 - Upgraded JPype1 dependency from 1.5.0 to 1.5.1
 
 ## [1.0.1]

diff --git a/envs/environment_3_10.yml b/envs/environment_3_10.yml
@@ -17,7 +17,7 @@ dependencies:
   - pip
   - pip:
     - gensim>=4.3.0
-    - scipy<1.15.0	    
+    - scipy<1.16.0
     - pykeen==1.11.0
     - temp
 
diff --git a/envs/environment_3_11.yml b/envs/environment_3_11.yml
@@ -17,7 +17,7 @@ dependencies:
   - pip
   - pip:
     - gensim>=4.3.0
-    - scipy<1.15.0	    
+    - scipy<1.16.0
     - pykeen==1.11.0
     - temp
 
diff --git a/envs/environment_3_12.yml b/envs/environment_3_12.yml
@@ -17,7 +17,7 @@ dependencies:
   - pip
   - pip:
     - gensim>=4.3.0
-    - scipy<1.15.0	    
+    - scipy<1.16.0
     - pykeen==1.11.0
     - temp
 
diff --git a/envs/environment_3_13.yml b/envs/environment_3_13.yml
@@ -13,7 +13,7 @@ dependencies:
   - pyyaml
   - requests
   - scikit-learn
-  - scipy<1.15.0  
+  - scipy<1.16.0  
   - tqdm
   - urllib3
   - pip

diff --git a/envs/environment_3_9.yml b/envs/environment_3_9.yml
@@ -17,7 +17,7 @@ dependencies:
   - pip
   - pip:
     - gensim>=4.3.0
-    - scipy<1.15.0	    
+    - scipy<1.16.0
     - pykeen==1.11.0
     - temp
 
diff --git a/envs/environment_dev_3_10.yml b/envs/environment_dev_3_10.yml
@@ -23,7 +23,7 @@ dependencies:
   - pip
   - pip:
     - gensim>=4.3.0
-    - scipy<1.15.0	    
+    - scipy<1.16.0
     - build
     - pykeen==1.11.0
     - numpy

diff --git a/envs/environment_dev_3_11.yml b/envs/environment_dev_3_11.yml
@@ -23,7 +23,7 @@ dependencies:
   - pip
   - pip:
     - gensim>=4.3.0
-    - scipy<1.15.0	    
+    - scipy<1.16.0
     - build
     - pykeen==1.11.0
     - numpy

diff --git a/envs/environment_dev_3_12.yml b/envs/environment_dev_3_12.yml
@@ -23,7 +23,7 @@ dependencies:
   - pip
   - pip:
     - gensim>=4.3.0
-    - scipy<1.15.0	    
+    - scipy<1.16.0
     - build
     - pykeen==1.11.0
     - numpy

diff --git a/envs/environment_dev_3_13.yml b/envs/environment_dev_3_13.yml
@@ -16,7 +16,7 @@ dependencies:
   - protobuf
   - pyyaml
   - requests
-  - scipy<1.15.0
+  - scipy<1.16.0
   - scikit-learn
   - urllib3
   - pytorch

diff --git a/envs/environment_dev_3_9.yml b/envs/environment_dev_3_9.yml
@@ -21,7 +21,7 @@ dependencies:
   - pip
   - pip:
     - gensim>=4.3.0
-    - scipy<1.15.0
+    - scipy<1.16.0
     - build
     - pykeen==1.11.0
     - numpy

diff --git a/setup.py b/setup.py
@@ -6,7 +6,7 @@
 
 setuptools.setup(
     name="mowl-borg",
-    version="1.0.2-dev.5",
+    version="1.0.2-dev.6",
     author="Bio-Ontology Research Group",
     author_email="[email protected]",
     description="mOWL: A machine learning library with ontologies",
@@ -38,7 +38,7 @@
         "pyyaml",
         "requests",
         "scikit-learn",
-        "scipy<1.15.0",
+        "scipy<1.16.0",
         "temp",
         "tqdm",
         "torch",