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21 Open 88 Closed
21 Open 88 Closed
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Issues list

Fail to fetch-load RefSeq sequences bug Something isn't working
#166 opened Aug 8, 2024 by gromdimon
Reintroduce or remove DuplicateFilter enhancement New feature or request
#150 opened May 27, 2024 by jsstevenson
1
seqrepo pull expects existing seqrepo dir bug Something isn't working
#146 opened Apr 20, 2024 by jsstevenson
Command Line usage example commands do not run properly bug Something isn't working documentation Improvements or additions to documentation
#137 opened Feb 13, 2024 by yxuil
@jsstevenson
3
Generalize the seqrepo interface and implement new backends keep alive exempt issue from staleness checks project proposal project proposal for interns and GSoC students
#136 opened Feb 5, 2024 by reece
5
Seqrepo not giving back consistent data bug Something isn't working
#129 opened Jan 5, 2024 by wlymanambry
6
Repeated sequence not being captured entirely, intermittent data issues bug Something isn't working
#128 opened Jan 2, 2024 by wlymanambry
1
update seqrepo to use the current biocommons.example project template
#119 opened Sep 17, 2023 by reece 0.7
@reece
2
Make coding style consistent with hgvs / enforce black and pylint
#108 opened May 4, 2023 by holtgrewe 0.7
3
Remove namespace warning
#106 opened May 4, 2023 by holtgrewe 0.7
3
Proof of concept for release-please in biocommons.seqrepo
#104 opened May 3, 2023 by holtgrewe 0.7
2
Suggestion: Build Ensembl transcript sequences by concatenating genomic exons enhancement New feature or request keep alive exempt issue from staleness checks
#103 opened Mar 21, 2023 by davmlaw
3
RFC: How to handle sequence casing and other transformations keep alive exempt issue from staleness checks
#94 opened Mar 3, 2021 by reece
3
Identifiers cleanup enhancement New feature or request
#91 opened Nov 26, 2020 by reece
3 tasks
0.7
2
Re-implement support for INSDC identifiers
#90 opened Nov 25, 2020 by reece 0.7
2
Implement sequence prefetching with in-memory cache keep alive exempt issue from staleness checks
#89 opened Oct 31, 2020 by reece
3
Add check constraints in DB schema enhancement New feature or request keep alive exempt issue from staleness checks
#84 opened Apr 11, 2020 by reece
2 tasks
4
Provide a mechanism to create release notes for a data release from logged changes documentation Improvements or additions to documentation keep alive exempt issue from staleness checks
#77 opened Apr 5, 2020 by reece
3
Support circular sequences enhancement New feature or request keep alive exempt issue from staleness checks
#70 opened Sep 7, 2019 by reece
4
Create abstract interface
#61 opened May 29, 2019 by reece 0.7
9
write documentation, deploy to RTD documentation Improvements or additions to documentation keep alive exempt issue from staleness checks
#8 opened Oct 2, 2016 by reece
3
ProTip! no:milestone will show everything without a milestone.