Releases: biofcallejas/Assembly-stats
Releases · biofcallejas/Assembly-stats
Assembly metrics from fasta file
This script will summarize the nucleotide content in a fasta file by calculating:
Total sequences
Total bases
Total Ns (undefined bases)
Total Gaps (strings of undefined bases longer than 5)
Shortest sequence
Longest sequence
Mean length
N50
Overall G+C content
Min G+C per sequence
Max G+C per sequence