All notable changes to this project will be documented in this file.
The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.
- Rework workflow to use new medaka methodology for improved robustness of results.
- Standardised report name.
- Resolved confusion between documentation and workflow: workflow now requires a directory as input.
- aplanat import error
- Prokka can be optionally run to annotate consensus sequence.
- Variant call summary produced using aplanat report component.
Initial release
- Basic running of medaka variant calling and report.