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The BED file spec says that strand given as '.' is unstranded but when parsed I am seeing that it is -1
test.pl
use Bio::FeatureIO; use Data::Dumper; my $io = Bio::FeatureIO->new( -format => 'bed', -file => 'test.txt' ); while ( my $f = $io->next_feature() ) { print $f->strand; }
test.txt
NbV1Ch01 18776453 18777002 MACS2_peak_1486 34 . 2.35549 5.48617 3.42439 437
The text was updated successfully, but these errors were encountered:
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The BED file spec says that strand given as '.' is unstranded but when parsed I am seeing that it is -1
test.pl
test.txt
The text was updated successfully, but these errors were encountered: