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Obsolete terms in mappings tables #167

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bgyori opened this issue Jun 28, 2024 · 0 comments
Open

Obsolete terms in mappings tables #167

bgyori opened this issue Jun 28, 2024 · 0 comments

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@bgyori
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bgyori commented Jun 28, 2024

As ontologies and other identifiers resources evolve, terms are sometimes deprecated or replaced by other terms. Through some downstream processes, I found a number of terms appearing in the curated mappings table that are not valid anymore. I don't have a complete list but these are some examples:

Some terms are obsolete while others have been replaced. I suppose when it comes to replacements, we could update mappings to use the new ID which is currently valid as a replacement. For terms that are obsolete without a replacement, perhaps keeping the mappings as is, and handling obsolete status downstream of Biomappings makes sense.

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