Merge branch 'main' into update_mobidb

biopragmatics · Nov 26, 2024 · 78c7d4f · 78c7d4f
2 parents a8220b3 + 2e9b955
commit 78c7d4f
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diff --git a/src/bioregistry/data/bioregistry.json b/src/bioregistry/data/bioregistry.json
@@ -46785,6 +46785,12 @@
       "uri_format": "http://genomesonline.org/cgi-bin/GOLD/bin/GOLDCards.cgi?goldstamp=$1"
     },
     "publications": [
+      {
+        "doi": "10.1093/nar/gkae1000",
+        "pubmed": "39498478",
+        "title": "Genomes OnLine Database (GOLD) v.10: new features and updates",
+        "year": 2024
+      },
       {
         "doi": "10.1093/nar/gkaa983",
         "pmc": "PMC7778979",
@@ -114820,6 +114826,21 @@
       "uri_format": "http://www.uniprot.org/uniprot/$1"
     },
     "providers": [
+      {
+        "code": "oglcnac",
+        "description": "A comprehensive catalog of O-GlcNAcylated proteins",
+        "homepage": "https://www.oglcnac.mcw.edu",
+        "name": "The O-GlcNAc Database",
+        "publications": [
+          {
+            "doi": "10.1007/s00216-024-05571-8",
+            "pubmed": "39379619",
+            "title": "The O-GlcNAc database: introducing new features and tools developed from community feedback",
+            "year": 2024
+          }
+        ],
+        "uri_format": "https://www.oglcnac.mcw.edu/search/?query_protein=$1"
+      },
       {
         "code": "iedb.antigen",
         "description": "A comprehensive collection of data on immune epitopes, covering experimental data and resources, including antigens",

diff --git a/src/bioregistry/data/curated_papers.tsv b/src/bioregistry/data/curated_papers.tsv
@@ -53,5 +53,7 @@ pubmed	relevant	orcid	date_curated	relevancy_type	pr_added	notes
 39341795	1	0009-0009-5240-7463	2024-10-19	new_prefix	1223	Identifiers for non-coding RNA biomarkers for cancers
 39341994	0	0009-0009-5240-7463	2024-10-15	not_identifiers_resource	1223	
 39345624	1	0009-0009-5240-7463	2024-10-19	new_publication	1223	Publication for sgd and sgd.pathways
+39379619	1	0009-0009-5240-7463	2024-11-26	new_provider	1285	Provider for UniProt
 39401100	1	0009-0009-5240-7463	2024-11-20	new_publication	1264	Publication for intact and intact.molecule
 39470701	1	0009-0009-5240-7463	2024-11-26	new_publication	1286	Publication for mobidb
+39498478	1	0009-0009-5240-7463	2024-11-25	new_publication	1283	Publication for gold