From ea44d292ce9fc4f095ff07aa4db1d0aee0f781bd Mon Sep 17 00:00:00 2001 From: StroemPhi Date: Thu, 21 Nov 2024 14:28:46 +0000 Subject: [PATCH 1/6] [create-pull-request] automated change --- src/bioregistry/data/bioregistry.json | 29 +++++++++++++++++++++++++++ 1 file changed, 29 insertions(+) diff --git a/src/bioregistry/data/bioregistry.json b/src/bioregistry/data/bioregistry.json index 470b30f7d..2f2eed523 100644 --- a/src/bioregistry/data/bioregistry.json +++ b/src/bioregistry/data/bioregistry.json @@ -22217,6 +22217,15 @@ "name": "Crates.io", "uri_format": "https://crates.io/crates/$1" }, + "creativebiolabs-net": { + "description": "[Creative Biolabs](https://www.creativebiolabs.net/) is a supplier of a wide range of antibodies from therapeutic antibodies and single domain antibodies to bispecific antibodies and intrabodies.", + "example": "TAB-884", + "github_request_issue": 1257, + "homepage": "https://www.creativebiolabs.net", + "name": "Creative Biolabs - Recombinant Antibodies", + "publications": [], + "repository": "bioregistry" + }, "credit": { "contact": { "email": "liz.allen@f1000.com", @@ -106932,6 +106941,26 @@ "prefix": "sopharm" } }, + "sosa": { + "contributor": { + "github": "StroemPhi", + "name": "Philip Strömert", + "orcid": "0000-0002-1595-3213" + }, + "description": "This ontology is based on the SSN Ontology by the W3C Semantic Sensor Networks Incubator Group (SSN-XG), together with considerations from the W3C/OGC Spatial Data on the Web Working Group.", + "example": "FeatureOfInterest", + "github_request_issue": 1274, + "homepage": "https://www.w3.org/TR/vocab-ssn/", + "license": "http://www.w3.org/Consortium/Legal/2015/copyright-software-and-document", + "name": "Sensor, Observation, Sample, and Actuator (SOSA) Ontology", + "publications": [ + { + "doi": "10.1016/j.websem.2018.06.003" + } + ], + "repository": "https://github.com/w3c/sdw", + "uri_format": "http://www.w3.org/ns/sosa/$1" + }, "soybase": { "biocontext": { "prefix": "SOYBASE" From 14457a13cb94f3471261e493ee53aa49f12f9a89 Mon Sep 17 00:00:00 2001 From: Charles Tapley Hoyt Date: Thu, 21 Nov 2024 15:55:43 +0100 Subject: [PATCH 2/6] Update bioregistry.json --- src/bioregistry/data/bioregistry.json | 13 +++++++++++-- 1 file changed, 11 insertions(+), 2 deletions(-) diff --git a/src/bioregistry/data/bioregistry.json b/src/bioregistry/data/bioregistry.json index 2f2eed523..520512063 100644 --- a/src/bioregistry/data/bioregistry.json +++ b/src/bioregistry/data/bioregistry.json @@ -106955,11 +106955,20 @@ "name": "Sensor, Observation, Sample, and Actuator (SOSA) Ontology", "publications": [ { - "doi": "10.1016/j.websem.2018.06.003" + "doi": "10.1016/j.websem.2018.06.003", + "title": "SOSA: A lightweight ontology for sensors, observations, samples, and actuators", + "year": 2019 } ], + "rdf_uri_format": "http://www.w3.org/ns/sosa/$1", "repository": "https://github.com/w3c/sdw", - "uri_format": "http://www.w3.org/ns/sosa/$1" + "reviewer": { + "email": "cthoyt@gmail.com", + "github": "cthoyt", + "name": "Charles Tapley Hoyt", + "orcid": "0000-0003-4423-4370" + }, + "uri_format": "https://www.w3.org/TR/vocab-ssn/#$1" }, "soybase": { "biocontext": { From 6faba65966d3cb97cdf5eccc6d0a967de9f1adac Mon Sep 17 00:00:00 2001 From: Charles Tapley Hoyt Date: Thu, 21 Nov 2024 15:57:45 +0100 Subject: [PATCH 3/6] Update bioregistry.json --- src/bioregistry/data/bioregistry.json | 9 --------- 1 file changed, 9 deletions(-) diff --git a/src/bioregistry/data/bioregistry.json b/src/bioregistry/data/bioregistry.json index 520512063..148fc995b 100644 --- a/src/bioregistry/data/bioregistry.json +++ b/src/bioregistry/data/bioregistry.json @@ -22217,15 +22217,6 @@ "name": "Crates.io", "uri_format": "https://crates.io/crates/$1" }, - "creativebiolabs-net": { - "description": "[Creative Biolabs](https://www.creativebiolabs.net/) is a supplier of a wide range of antibodies from therapeutic antibodies and single domain antibodies to bispecific antibodies and intrabodies.", - "example": "TAB-884", - "github_request_issue": 1257, - "homepage": "https://www.creativebiolabs.net", - "name": "Creative Biolabs - Recombinant Antibodies", - "publications": [], - "repository": "bioregistry" - }, "credit": { "contact": { "email": "liz.allen@f1000.com", From b873e24990b932fff045d150c472cdbe1eed4551 Mon Sep 17 00:00:00 2001 From: Charles Tapley Hoyt Date: Thu, 21 Nov 2024 16:22:17 +0100 Subject: [PATCH 4/6] Update bioregistry.json --- src/bioregistry/data/bioregistry.json | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/src/bioregistry/data/bioregistry.json b/src/bioregistry/data/bioregistry.json index 148fc995b..fe4b2fcaf 100644 --- a/src/bioregistry/data/bioregistry.json +++ b/src/bioregistry/data/bioregistry.json @@ -106943,7 +106943,7 @@ "github_request_issue": 1274, "homepage": "https://www.w3.org/TR/vocab-ssn/", "license": "http://www.w3.org/Consortium/Legal/2015/copyright-software-and-document", - "name": "Sensor, Observation, Sample, and Actuator (SOSA) Ontology", + "name": "Sensor, Observation, Sample, and Actuator Ontology", "publications": [ { "doi": "10.1016/j.websem.2018.06.003", @@ -106951,7 +106951,6 @@ "year": 2019 } ], - "rdf_uri_format": "http://www.w3.org/ns/sosa/$1", "repository": "https://github.com/w3c/sdw", "reviewer": { "email": "cthoyt@gmail.com", @@ -106959,7 +106958,7 @@ "name": "Charles Tapley Hoyt", "orcid": "0000-0003-4423-4370" }, - "uri_format": "https://www.w3.org/TR/vocab-ssn/#$1" + "uri_format": "http://www.w3.org/ns/sosa/$1" }, "soybase": { "biocontext": { From 86c6b80dedece3a572e24c1e13252d331f24957b Mon Sep 17 00:00:00 2001 From: Charles Tapley Hoyt Date: Thu, 21 Nov 2024 16:23:25 +0100 Subject: [PATCH 5/6] Update bioregistry.json --- src/bioregistry/data/bioregistry.json | 1 + 1 file changed, 1 insertion(+) diff --git a/src/bioregistry/data/bioregistry.json b/src/bioregistry/data/bioregistry.json index fe4b2fcaf..b15664608 100644 --- a/src/bioregistry/data/bioregistry.json +++ b/src/bioregistry/data/bioregistry.json @@ -106939,6 +106939,7 @@ "orcid": "0000-0002-1595-3213" }, "description": "This ontology is based on the SSN Ontology by the W3C Semantic Sensor Networks Incubator Group (SSN-XG), together with considerations from the W3C/OGC Spatial Data on the Web Working Group.", + "download_rdf": "https://www.w3.org/ns/sosa/", "example": "FeatureOfInterest", "github_request_issue": 1274, "homepage": "https://www.w3.org/TR/vocab-ssn/", From 648a6e0d24e7524a3202a32303f7c3f48f16ebab Mon Sep 17 00:00:00 2001 From: Charles Tapley Hoyt Date: Thu, 21 Nov 2024 16:28:20 +0100 Subject: [PATCH 6/6] Update bioregistry.json --- src/bioregistry/data/bioregistry.json | 6 ++++++ 1 file changed, 6 insertions(+) diff --git a/src/bioregistry/data/bioregistry.json b/src/bioregistry/data/bioregistry.json index b15664608..37fb331d9 100644 --- a/src/bioregistry/data/bioregistry.json +++ b/src/bioregistry/data/bioregistry.json @@ -106933,6 +106933,12 @@ } }, "sosa": { + "contact": { + "email": "dr.shorthair@pm.me", + "github": "dr-shorthair", + "name": "Simon Cox", + "orcid": "0000-0002-3884-3420" + }, "contributor": { "github": "StroemPhi", "name": "Philip Strömert",