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calc_2pm_diameters

Develop software that calc vessel diameters from TPLSM image data

  • Develop Image analysis software that calc vessel diameters from TPLSM image data
  • Bjørn Hald
  • Dept. of Neuroscience, University of Copenhagen

First commit: one edges.py file that takes a tiff file and uses matplotlib to visualize and scikit-image to segment the file and calc vessel diameter across a selected rectangular region