lems.xml.mustache

<?xml version="1.0"?>
<Lems xmlns="http://www.neuroml.org/lems/0.7.2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.neuroml.org/lems/0.7.2  https://raw.github.com/LEMS/LEMS/development/Schemas/LEMS/LEMS_v0.7.2.xsd">

  <Target component="sim1" reportFile="simulator.props" timesFile="time.dat"/>

  <!--Include standard NeuroML 2 ComponentType definitions-->
  <Include file="Cells.xml"/>
  <Include file="Networks.xml"/>
  <Include file="Simulation.xml"/>

  <!-- Channel/synapse files-->
  {{#nml_mechanisms}}
  <Include file="{{name}}.channel.nml"/>
  {{/nml_mechanisms}}
  {{#passive}}
  <Include file="{{name}}.channel.nml"/>
  {{/passive}}

  <!--   Cell files-->
  <Include file=".sccct_generated.cell.nml"/>

  <!--   Network file-->
  <Include file=".sccct_generated.net.nml"/>

  <!--Note: this could be: Simulation id="sim1" ... , but Component type="Simulation" ...
  is used to allow validation of this file according to the LEMS schema specified above...-->
  <Component type="Simulation" id="sim1" length="{{run.total}} ms" step="{{run.dt}} ms" target="net">
    {{#plot}}
    <Display id="d1" title="voltage"  xmin="0" xmax="{{run.total}}" ymin="-100.0" ymax="100" timeScale="1ms">
        <Line id="VOLTAGE" timeScale="1ms" quantity="pop/0/cell/v" scale="1 mV" color="#000000"/>
    </Display>
    {{/plot}}

    <OutputFile id="outf" fileName="jlems_generated_sccct.dat">
      <OutputColumn id="v" quantity="pop/0/cell/v"/>
    </OutputFile>

  </Component>

</Lems>