| layout | title |
|---|---|
page |
Peer reviewed articles |
2020
“PIQMEE: Bayesian phylodynamic method for analysis of large datasets with duplicate sequences.” Veronika Boskova and Tanja Stadler. Molecular Biology and Evolution, msaa136 (DOI: 10.1093/molbev/msaa136)
2018
“The influence of phylodynamic model specifications on parameter estimates of the Zika virus epidemic.” Veronika Boskova, Tanja Stadler, and Carsten Magnus. Virus Evolution, 4(1): vex044 (DOI: 10.1093/ve/vex044)
2017
“Taming the BEAST - A Community Teaching Material Resource for BEAST 2.” Joëlle Barido-Sottani*, Veronika Bošková*, Louis Du Plessis*, Denise Kühnert*, Carsten Magnus*, Venelin Mitov*, Nicola F. Müller*, Jūlija Pečerska*, David A. Rasmussen*, Chi Zhang*, Alexei J. Drummond, Tracy A. Heath, Oliver G. Pybus, Timothy G. Vaughan, and Tanja Stadler. Systematic Biology, 67(1): 170-174 (DOI: 10.1093/sysbio/syx060)
2016
“Outbreak investigation for toxigenic Corynebacterium diphtheriae wound infections in refugees from Northeast Africa and Syria in Switzerland and Germany by whole genome sequencing.” Dominik M. Meinel, Richard Kuehl, Reinhard Zbinden, Veronika Boskova, Christian Garzoni, Davide Fadini, Marisa Dolina, Benjamin Blümel, Thomas Weibel, Sarah Tschudin-Sutter, Andreas F. Widmer, Julia A. Bielicki, Alexa Dierig, Ulrich Heininger, Regina Konrad, Anja Berger, Vladimira Hinic, Daniel Goldenberger, Annette Blaich, Tanja Stadler, Manuel Battegay, Andreas Sing, and Adrian Egli. Clinical Microbiology and Infection, 22(12): 1003.e1-1003.e8 (DOI: 10.1016/j.cmi.2016.08.010)
2015
“The contrasting phylodynamics of human influenza B viruses.” Dhanasekaran Vijaykrishna, Edward C. Holmes, Udayan Joseph, Mathieu Fourment, Yvonne C.F. Su, Rebecca Halpin, Raphael T.C. Lee, Yi-Mo Deng, Vithiagaran Gunalan, Xudong Lin, Timothy B. Stockwell, Nadia B. Fedorova, Bin Zhou, Natalie Spirason, Denise Kühnert, Veronika Bošková, Tanja Stadler, Anna-Maria Costa, Dominic E Dwyer, Q Sue Huang, Lance C Jennings, William Rawlinson, Sheena G Sullivan, Aeron C Hurt, Sebastian Maurer-Stroh, David E Wentworth, Gavin JD Smith, and Ian G Barr. eLife, 4: e05055 (DOI: 10.7554/eLife.05055)
"Maximum-likelihood tree estimation using codon substitution models with multiple partitions.” Stefan Zoller, Veronika Boskova, and Maria Anisimova. Molecular Biology and Evolution, 32(8): 2208-2216 (DOI: 10.1093/molbev/msv097)
2014
“Inference of epidemiological dynamics based on simulated phylogenies using birth-death and coalescent models.” Veronika Boskova, Sebastian Bonhoeffer, and Tanja Stadler. PLoS Computational Biology, 10(11): e1003913 (DOI: 10.1371/journal.pcbi.1003913)
2013
“Systematic biases in DNA copy number originate from isolation procedures.” Sebastiaan van Heesch, Michal Mokry, Veronika Boskova, Wade Junker, Rajdeep Mehon, Pim Toonen, Ewart de Bruijn, James D Shull, Timothy J Aitman, Edwin Cuppen, and Victor Guryev. Genome biology, 14(4): R33 (DOI: 10.1186/gb-2013-14-4-r33)
* shared first authors