version.xml

<addon name='PIQMEE' version='1.1.0'>
    <depends on='BEAST.base' atleast='2.7.2'/>
    <depends on='BEAST.app' atleast='2.7.2'/>
    <depends on='BDSKY' atleast='1.5.0'/>


    <service type="beast.base.core.BEASTInterface">
        <provider classname="piqmee.classiclikelihood.QuasiSpeciesTreeLikelihood"/>
        <provider classname="piqmee.distance.DifferenceCount"/>
        <provider classname="piqmee.distributions.BirthDeathSkylineModel"/>
        <provider classname="piqmee.distributions.QuasiSpeciesBirthDeathSkylineModel"/>
        <provider classname="piqmee.evolution.branchratemodel.CategoriesLogger"/>
        <provider classname="piqmee.evolution.branchratemodel.QuasiSpeciesRateStatistic"/>
        <provider classname="piqmee.evolution.branchratemodel.QuasiSpeciesUCRelaxedClockModel"/>
        <provider classname="piqmee.likelihood.QuasiSpeciesBeagleTreeLikelihood"/>
        <provider classname="piqmee.likelihood.QuasiSpeciesBeagleTreeLikelihood3"/>
        <provider classname="piqmee.likelihood.QuasiSpeciesBeagleTreeLikelihood3b"/>
        <provider classname="piqmee.likelihood.QuasiSpeciesBeagleTreeLikelihood4"/>
        <provider classname="piqmee.likelihood.QuasiSpeciesTreeLikelihood"/>
        <provider classname="piqmee.likelihood.QuasiSpeciesTreeLikelihood2"/>
        <provider classname="piqmee.likelihood.QuasiSpeciesTreeLikelihood3"/>
        <provider classname="piqmee.operators.QuasiSpeciesHaplotypeScale"/>
        <provider classname="piqmee.operators.QuasiSpeciesHaplotypeSwap"/>
        <provider classname="piqmee.operators.QuasiSpeciesSequenceAttachmentRandom"/>
        <provider classname="piqmee.operators.QuasiSpeciesSequenceAttachmentUniform"/>
        <provider classname="piqmee.operators.QuasiSpeciesSubtreeExchange"/>
        <provider classname="piqmee.operators.QuasiSpeciesSubtreeExchangeEasy"/>
        <provider classname="piqmee.operators.QuasiSpeciesTreeScale"/>
        <provider classname="piqmee.operators.QuasiSpeciesUCRelaxedClockCategoriesUniform"/>
        <provider classname="piqmee.operators.QuasiSpeciesUniform"/>
        <provider classname="piqmee.operators.QuasiSpeciesWilsonBalding"/>
        <provider classname="piqmee.operators.QuasiSpeciesWilsonBaldingEasy"/>
        <provider classname="piqmee.tree.QuasiSpeciesClusterTree"/>
        <provider classname="piqmee.tree.QuasiSpeciesNode"/>
        <provider classname="piqmee.tree.QuasiSpeciesRandomTree"/>
        <provider classname="piqmee.tree.QuasiSpeciesTree"/>
        <provider classname="piqmee.tree.QuasiSpeciesTreeFromNewick"/>
        <provider classname="piqmee.util.AbsoluteTreeHeight"/>
        <provider classname="piqmee.util.AttachmentTimes"/>
        <provider classname="piqmee.util.AttachmentTimesAll"/>
        <provider classname="piqmee.util.QuasiSpeciesNodeTreeLogger"/>
    </service>

    <service type="beastfx.app.inputeditor.InputEditor">
        <provider classname="piqmee.app.beauti.HaplotypeCountsInputEditor"/>
    </service>


</addon>