erDiagram
DigitalAsset {
stringList digest
string content_url
string data_type
string id
iri_type iri
curieList category
stringList type
label_type name
narrative_text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label_type full_name
label_typeList synonym
string license
string rights
string format
date creation_date
}
ProvActivity {
}
ProvEntity {
}
DissectionRoiPolygon {
label_type name
string id
iri_type iri
curieList category
stringList type
narrative_text description
boolean deprecated
}
LibraryPooling {
string process_date
string id
iri_type iri
curieList category
stringList type
label_type name
narrative_text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label_type full_name
label_typeList synonym
}
LibraryConstruction {
library_technique method
date process_date
float input_quantity_ng
string set
string id
iri_type iri
curieList category
stringList type
label_type name
narrative_text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label_type full_name
label_typeList synonym
}
CdnaAmplification {
integer pcr_cycles
date process_date
string set
string id
iri_type iri
curieList category
stringList type
label_type name
narrative_text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label_type full_name
label_typeList synonym
}
CellBarcoding {
string port_well
integer input_quantity
string process_date
barcoded_cell_sample_technique method
string id
iri_type iri
curieList category
stringList type
label_type name
narrative_text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label_type full_name
label_typeList synonym
}
EnrichedCellSampleSplitting {
string id
iri_type iri
curieList category
stringList type
label_type name
narrative_text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label_type full_name
label_typeList synonym
}
CellEnrichment {
string process_date
string id
iri_type iri
curieList category
stringList type
label_type name
narrative_text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label_type full_name
label_typeList synonym
}
CellDissociation {
string process_date
string id
iri_type iri
curieList category
stringList type
label_type name
narrative_text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label_type full_name
label_typeList synonym
}
TissueDissection {
string id
iri_type iri
curieList category
stringList type
label_type name
narrative_text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label_type full_name
label_typeList synonym
}
DissectionRoiDelineation {
string id
iri_type iri
curieList category
stringList type
label_type name
narrative_text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label_type full_name
label_typeList synonym
}
LibraryPool {
label_type name
string local_tube_id
string id
iri_type iri
curieList category
stringList type
narrative_text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label_type full_name
label_typeList synonym
}
LibraryAliquot {
label_type name
string id
iri_type iri
curieList category
stringList type
narrative_text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label_type full_name
label_typeList synonym
}
Library {
label_type name
integer average_size_bp
float concentration_nm
library_prep_pass_fail pass_fail_result
float quantity_fmol
float quantity_ng
library_r1_r2_index r1_r2_index
string id
iri_type iri
curieList category
stringList type
narrative_text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label_type full_name
label_typeList synonym
}
AmplifiedCdna {
label_type name
float quantity_ng
amplified_cdna_rna_amplification_pass_fail pass_fail_result
float percent_cdna_longer_than_400bp
string id
iri_type iri
curieList category
stringList type
narrative_text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label_type full_name
label_typeList synonym
}
BarcodedCellSample {
label_type name
integer number_of_expected_cells
string id
iri_type iri
curieList category
stringList type
narrative_text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label_type full_name
label_typeList synonym
}
EnrichedCellSample {
label_type name
string enrichment_population
string cell_source_oligo_name
string histone_modification_marker
string id
iri_type iri
curieList category
stringList type
narrative_text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label_type full_name
label_typeList synonym
}
DissociatedCellSample {
label_type name
dissociated_cell_sample_cell_prep_type cell_prep_type
dissociated_cell_sample_cell_label_barcode cell_source_oligo_name
string id
iri_type iri
curieList category
stringList type
narrative_text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label_type full_name
label_typeList synonym
}
TissueSample {
label_type name
stringList structure
string id
iri_type iri
curieList category
stringList type
narrative_text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label_type full_name
label_typeList synonym
}
BrainSlab {
label_type name
string id
iri_type iri
curieList category
stringList type
narrative_text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label_type full_name
label_typeList synonym
}
Donor {
label_type name
sex biological_sex
string age_at_death_description
age_at_death_reference_point age_at_death_reference_point
age_at_death_unit age_at_death_unit
float age_at_death_value
string species
label_type in_taxon_label
string id
iri_type iri
curieList category
stringList type
narrative_text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label_type full_name
label_typeList synonym
}
DigitalAsset ||--|o LibraryPool : "was_derived_from"
DigitalAsset ||--|o ProvActivity : "was_generated_by"
DigitalAsset ||--}o Attribute : "has attribute"
ProvActivity ||--|o ProvEntity : "used"
ProvEntity ||--|o ProvEntity : "was_derived_from"
ProvEntity ||--|o ProvActivity : "was_generated_by"
DissectionRoiPolygon ||--|o DissectionRoiDelineation : "was_generated_by"
DissectionRoiPolygon ||--|o BrainSlab : "annotates"
DissectionRoiPolygon ||--|o ProvEntity : "was_derived_from"
DissectionRoiPolygon ||--}o Attribute : "has attribute"
LibraryPooling ||--}o LibraryAliquot : "used"
LibraryPooling ||--}o Attribute : "has attribute"
LibraryConstruction ||--|o ProvEntity : "used"
LibraryConstruction ||--}o Attribute : "has attribute"
CdnaAmplification ||--|o BarcodedCellSample : "used"
CdnaAmplification ||--}o Attribute : "has attribute"
CellBarcoding ||--}o ProvEntity : "used"
CellBarcoding ||--}o Attribute : "has attribute"
EnrichedCellSampleSplitting ||--|o EnrichedCellSample : "used"
EnrichedCellSampleSplitting ||--}o Attribute : "has attribute"
CellEnrichment ||--}o DissociatedCellSample : "used"
CellEnrichment ||--}o Attribute : "has attribute"
CellDissociation ||--}o TissueSample : "used"
CellDissociation ||--}o Attribute : "has attribute"
TissueDissection ||--|o BrainSlab : "used"
TissueDissection ||--|o DissectionRoiPolygon : "was_guided_by"
TissueDissection ||--}o Attribute : "has attribute"
DissectionRoiDelineation ||--|o BrainSlab : "used"
DissectionRoiDelineation ||--}o Attribute : "has attribute"
LibraryPool ||--|o LibraryPooling : "was_generated_by"
LibraryPool ||--}o LibraryAliquot : "was_derived_from"
LibraryPool ||--}o Attribute : "has attribute"
LibraryAliquot ||--|o Library : "was_derived_from"
LibraryAliquot ||--|o ProvActivity : "was_generated_by"
LibraryAliquot ||--}o Attribute : "has attribute"
Library ||--|o LibraryConstruction : "was_generated_by"
Library ||--|o ProvEntity : "was_derived_from"
Library ||--}o Attribute : "has attribute"
AmplifiedCdna ||--|o CdnaAmplification : "was_generated_by"
AmplifiedCdna ||--|o BarcodedCellSample : "was_derived_from"
AmplifiedCdna ||--}o Attribute : "has attribute"
BarcodedCellSample ||--|o CellBarcoding : "was_generated_by"
BarcodedCellSample ||--}o ProvEntity : "was_derived_from"
BarcodedCellSample ||--}o Attribute : "has attribute"
EnrichedCellSample ||--|o ProvActivity : "was_generated_by"
EnrichedCellSample ||--}o ProvEntity : "was_derived_from"
EnrichedCellSample ||--}o Attribute : "has attribute"
DissociatedCellSample ||--|o CellDissociation : "was_generated_by"
DissociatedCellSample ||--}o TissueSample : "was_derived_from"
DissociatedCellSample ||--}o Attribute : "has attribute"
TissueSample ||--|o Donor : "was_derived_from"
TissueSample ||--|o TissueDissection : "was_generated_by"
TissueSample ||--|o DissectionRoiPolygon : "dissection_was_guided_by"
TissueSample ||--}o Attribute : "has attribute"
BrainSlab ||--|o ProvEntity : "was_derived_from"
BrainSlab ||--|o ProvActivity : "was_generated_by"
BrainSlab ||--}o Attribute : "has attribute"
Donor ||--}o OrganismTaxon : "in taxon"
Donor ||--|o ProvEntity : "was_derived_from"
Donor ||--|o ProvActivity : "was_generated_by"
Donor ||--}o Attribute : "has attribute"