From 5d469339e7297cdede20364175b44905950ee35e Mon Sep 17 00:00:00 2001 From: aawdeh Date: Thu, 16 Jan 2025 07:22:59 -0500 Subject: [PATCH] Run one star instance --- pipelines/skylab/optimus/Optimus.wdl | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pipelines/skylab/optimus/Optimus.wdl b/pipelines/skylab/optimus/Optimus.wdl index f10e180fa5..50f34a1b59 100644 --- a/pipelines/skylab/optimus/Optimus.wdl +++ b/pipelines/skylab/optimus/Optimus.wdl @@ -181,7 +181,7 @@ workflow Optimus { samtools_star_docker_path = docker_prefix + samtools_star, is_slidetags = is_slidetags } - } + call Metrics.CalculateGeneMetrics as GeneMetrics { input: bam_input = STARsoloFastq.output_bam,