Skip to content

Commit

Permalink
Prepare for CRAN submission
Browse files Browse the repository at this point in the history
  • Loading branch information
brownag committed Nov 19, 2023
1 parent 4595b33 commit e7fe1f9
Show file tree
Hide file tree
Showing 13 changed files with 94 additions and 683 deletions.
3 changes: 3 additions & 0 deletions .Rbuildignore
Original file line number Diff line number Diff line change
Expand Up @@ -7,3 +7,6 @@ misc
^data-raw$
^\.github$
^codecov\.yml$
^cran-comments\.md$
^LICENSE\.md$
^CRAN-SUBMISSION$
2 changes: 1 addition & 1 deletion DESCRIPTION
Original file line number Diff line number Diff line change
Expand Up @@ -17,7 +17,7 @@ Suggests:
tinytest,
dplyr,
dbplyr
License: GPL-3 + file LICENSE
License: CC0
Depends: R (>= 3.1.0)
RoxygenNote: 7.2.3
Roxygen: list(markdown = TRUE)
Expand Down
674 changes: 0 additions & 674 deletions LICENSE

This file was deleted.

43 changes: 43 additions & 0 deletions LICENSE.md
Original file line number Diff line number Diff line change
@@ -0,0 +1,43 @@
## creative commons

# CC0 1.0 Universal

CREATIVE COMMONS CORPORATION IS NOT A LAW FIRM AND DOES NOT PROVIDE LEGAL SERVICES. DISTRIBUTION OF THIS DOCUMENT DOES NOT CREATE AN ATTORNEY-CLIENT RELATIONSHIP. CREATIVE COMMONS PROVIDES THIS INFORMATION ON AN "AS-IS" BASIS. CREATIVE COMMONS MAKES NO WARRANTIES REGARDING THE USE OF THIS DOCUMENT OR THE INFORMATION OR WORKS PROVIDED HEREUNDER, AND DISCLAIMS LIABILITY FOR DAMAGES RESULTING FROM THE USE OF THIS DOCUMENT OR THE INFORMATION OR WORKS PROVIDED HEREUNDER.

### Statement of Purpose

The laws of most jurisdictions throughout the world automatically confer exclusive Copyright and Related Rights (defined below) upon the creator and subsequent owner(s) (each and all, an "owner") of an original work of authorship and/or a database (each, a "Work").

Certain owners wish to permanently relinquish those rights to a Work for the purpose of contributing to a commons of creative, cultural and scientific works ("Commons") that the public can reliably and without fear of later claims of infringement build upon, modify, incorporate in other works, reuse and redistribute as freely as possible in any form whatsoever and for any purposes, including without limitation commercial purposes. These owners may contribute to the Commons to promote the ideal of a free culture and the further production of creative, cultural and scientific works, or to gain reputation or greater distribution for their Work in part through the use and efforts of others.

For these and/or other purposes and motivations, and without any expectation of additional consideration or compensation, the person associating CC0 with a Work (the "Affirmer"), to the extent that he or she is an owner of Copyright and Related Rights in the Work, voluntarily elects to apply CC0 to the Work and publicly distribute the Work under its terms, with knowledge of his or her Copyright and Related Rights in the Work and the meaning and intended legal effect of CC0 on those rights.

1. __Copyright and Related Rights.__ A Work made available under CC0 may be protected by copyright and related or neighboring rights ("Copyright and Related Rights"). Copyright and Related Rights include, but are not limited to, the following:

i. the right to reproduce, adapt, distribute, perform, display, communicate, and translate a Work;

ii. moral rights retained by the original author(s) and/or performer(s);

iii. publicity and privacy rights pertaining to a person's image or likeness depicted in a Work;

iv. rights protecting against unfair competition in regards to a Work, subject to the limitations in paragraph 4(a), below;

v. rights protecting the extraction, dissemination, use and reuse of data in a Work;

vi. database rights (such as those arising under Directive 96/9/EC of the European Parliament and of the Council of 11 March 1996 on the legal protection of databases, and under any national implementation thereof, including any amended or successor version of such directive); and

vii. other similar, equivalent or corresponding rights throughout the world based on applicable law or treaty, and any national implementations thereof.

2. __Waiver.__ To the greatest extent permitted by, but not in contravention of, applicable law, Affirmer hereby overtly, fully, permanently, irrevocably and unconditionally waives, abandons, and surrenders all of Affirmer's Copyright and Related Rights and associated claims and causes of action, whether now known or unknown (including existing as well as future claims and causes of action), in the Work (i) in all territories worldwide, (ii) for the maximum duration provided by applicable law or treaty (including future time extensions), (iii) in any current or future medium and for any number of copies, and (iv) for any purpose whatsoever, including without limitation commercial, advertising or promotional purposes (the "Waiver"). Affirmer makes the Waiver for the benefit of each member of the public at large and to the detriment of Affirmer's heirs and successors, fully intending that such Waiver shall not be subject to revocation, rescission, cancellation, termination, or any other legal or equitable action to disrupt the quiet enjoyment of the Work by the public as contemplated by Affirmer's express Statement of Purpose.

3. __Public License Fallback.__ Should any part of the Waiver for any reason be judged legally invalid or ineffective under applicable law, then the Waiver shall be preserved to the maximum extent permitted taking into account Affirmer's express Statement of Purpose. In addition, to the extent the Waiver is so judged Affirmer hereby grants to each affected person a royalty-free, non transferable, non sublicensable, non exclusive, irrevocable and unconditional license to exercise Affirmer's Copyright and Related Rights in the Work (i) in all territories worldwide, (ii) for the maximum duration provided by applicable law or treaty (including future time extensions), (iii) in any current or future medium and for any number of copies, and (iv) for any purpose whatsoever, including without limitation commercial, advertising or promotional purposes (the "License"). The License shall be deemed effective as of the date CC0 was applied by Affirmer to the Work. Should any part of the License for any reason be judged legally invalid or ineffective under applicable law, such partial invalidity or ineffectiveness shall not invalidate the remainder of the License, and in such case Affirmer hereby affirms that he or she will not (i) exercise any of his or her remaining Copyright and Related Rights in the Work or (ii) assert any associated claims and causes of action with respect to the Work, in either case contrary to Affirmer's express Statement of Purpose.

4. __Limitations and Disclaimers.__

a. No trademark or patent rights held by Affirmer are waived, abandoned, surrendered, licensed or otherwise affected by this document.

b. Affirmer offers the Work as-is and makes no representations or warranties of any kind concerning the Work, express, implied, statutory or otherwise, including without limitation warranties of title, merchantability, fitness for a particular purpose, non infringement, or the absence of latent or other defects, accuracy, or the present or absence of errors, whether or not discoverable, all to the greatest extent permissible under applicable law.

c. Affirmer disclaims responsibility for clearing rights of other persons that may apply to the Work or any use thereof, including without limitation any person's Copyright and Related Rights in the Work. Further, Affirmer disclaims responsibility for obtaining any necessary consents, permissions or other rights required for any use of the Work.

d. Affirmer understands and acknowledges that Creative Commons is not a party to this document and has no duty or obligation with respect to this CC0 or use of the Work.
3 changes: 1 addition & 2 deletions R/gpkg-connection.R
Original file line number Diff line number Diff line change
Expand Up @@ -3,8 +3,7 @@
#'
#' Method for creating and connecting `SQLiteConnection` object stored within `geopackage` object.
#'
#' @details The S3 method for `geopackage` objects requires the use of assignment to create an object containing an active SQLiteConnection. e.g. `g <- gpkg_connect(g)` or `g <- gpkg_connect(g$dsn)` or `g <- geopackage(..., connect=TRUE)`
#'
#' @details The S3 method for `geopackage` objects does not require the use of assignment to create an object containing an active SQLiteConnection. e.g. `gpkg_connect(g)` connects the existing `geopackage` object `g`
#' @param x Path to GeoPackage
#'
#' @return A DBIConnection (SQLiteConnection) object. `NULL` on error.
Expand Down
2 changes: 1 addition & 1 deletion R/gpkg-io.R
Original file line number Diff line number Diff line change
Expand Up @@ -56,7 +56,7 @@ gpkg_read <- function(x, connect = FALSE, quiet = TRUE) {
names(res2) <- do.call('c', lapply(res, function(x) names(x$tables)))
g <- geopackage(res2, dsn = x)
if (connect) {
g <- gpkg_connect(g)
gpkg_connect(g)
}
g
}
Expand Down
2 changes: 2 additions & 0 deletions R/gpkg-table.R
Original file line number Diff line number Diff line change
Expand Up @@ -93,6 +93,8 @@ gpkg_table_pragma.geopackage <- function(x, table_name = NULL, ...) {
#' dplyr::filter(tpudt_name == "DEM2") %>%
#' dplyr::select(mean, std_dev) %>%
#' dplyr::collect()
#'
#' gpkg_disconnect(g)
gpkg_table <- function(x,
table_name,
collect = FALSE,
Expand Down
10 changes: 8 additions & 2 deletions README.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -30,7 +30,13 @@ High-level wrapper functions to build [Open Geospatial Consortium (OGC) 'GeoPack

## Installation

The package can be installed from GitHub with {remotes}
Install the latest release from CRAN:

```r
install.packages("gpkg")
```

The development package can be installed from GitHub with {remotes}

```r
if (!requireNamespace("remotes"))
Expand Down Expand Up @@ -247,7 +253,7 @@ gpkg_is_connected(g)
gpkg_disconnect(g)
# reconnect
g <- gpkg_connect(g)
gpkg_connect(g)
# disconnect
gpkg_disconnect(g)
Expand Down
6 changes: 6 additions & 0 deletions cran-comments.md
Original file line number Diff line number Diff line change
@@ -0,0 +1,6 @@
## R CMD check results

0 errors | 0 warnings | 1 note

* This is a new release.
* Geospatial is spelled correctly, OGC is the acronym of Open Geospatial Consortium
2 changes: 1 addition & 1 deletion man/gpkg-connection.Rd

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

4 changes: 2 additions & 2 deletions man/gpkg-package.Rd

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

2 changes: 2 additions & 0 deletions man/gpkg_table.Rd

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

24 changes: 24 additions & 0 deletions misc/gpkg-terra-example.R
Original file line number Diff line number Diff line change
@@ -0,0 +1,24 @@
library(gpkg)
library(terra)

f <- "~/Downloads/All_SSURGO_10_06_2023.gpkg"
file.size(f)/(1024^3) # GB

all_ssurgo <- geopackage(f)
all_ssurgo

# survey area polygon SpatVector
v <- gpkg_vect(all_ssurgo, "sapolygon")
plot(v)

gpkg_table(all_ssurgo, "sdvcatalog")

# terra query very powerful / fast on large 100GB gpkg
gpkg_vect(all_ssurgo, "mupolygon", proxy = TRUE) |>
query(where = "areasymbol = 'CA041'") -> v2

plot(v2)
plot(as.lines(subset(v, v$areasymbol == "CA041")),
col = "BLUE",
lwd = 2,
add = TRUE)

0 comments on commit e7fe1f9

Please sign in to comment.