From beb9fa77935476a931a68058f13bac637d4c796e Mon Sep 17 00:00:00 2001
From: akhil-rana <akhilrana0001@gmail.com>
Date: Fri, 17 Apr 2020 04:20:16 +0530
Subject: [PATCH 01/19] info_dash_on_Slides_page

---
 apps/Info.html            | 10 +++++-----
 apps/landing/landing.html |  3 ---
 apps/table.html           |  8 ++++----
 3 files changed, 9 insertions(+), 12 deletions(-)

diff --git a/apps/Info.html b/apps/Info.html
index b82830229..6adc94f70 100644
--- a/apps/Info.html
+++ b/apps/Info.html
@@ -60,12 +60,9 @@
 				<li class="nav-item link">
 					<a class="nav-link" href="landing/landing.html"> <i class="fas fa-home"></i> Home</a>
 				</li>
-				<li class="nav-item link">
+				<li class="nav-item link active">
 					<a class="nav-link" href="table.html"> <i class="fas fa-list-ul"></i> Slides</a>
 				</li>
-        <li class="nav-item active link">
-          <a class="nav-link" href="Info.html"> <i class="fas fa-info-circle"></i> Info</a>
-        </li>
 			</ul>
 			<ul class="navbar-nav">
 				<li class="nav-item link" style="font-family: sans-serif;">
@@ -85,9 +82,12 @@ <h1 class="h1">caMicroscope</h1>
 
 	<div class="container">
 	<h3 class="text-center h3 mb-2" style="margin-top:8px;margin-bottom:10px;">Information Dashboard</h3>
-	<div class="form-group has-search">
+	<div class="form-group has-search" style="width: 27em; display:flex">
 		<span class="fa fa-search form-control-feedback"></span>
 		<input id="search-table" type="text" class="form-control" placeholder="Search">
+		<a href="./table.html" style="margin-left: 1em;">
+			<button type="button" class="btn btn-info">Slides</button>
+		</a>
 	</div>
 
   <div class="table-responsive" id="summary">
diff --git a/apps/landing/landing.html b/apps/landing/landing.html
index eac0678ca..3eec4603a 100644
--- a/apps/landing/landing.html
+++ b/apps/landing/landing.html
@@ -50,9 +50,6 @@
             <li class="nav-item  link" style="font-family: sans-serif;">
                 <a class="nav-link" href="../table.html"> <i class="fas fa-list-ul"></i>  Slides</a>
             </li>
-            <li class="nav-item link">
-                <a class="nav-link" href="Info.html"> <i class="fas fa-info-circle"></i> Info</a>
-            </li>
         </ul>
         <ul class="navbar-nav">
             <li class="nav-item link" style="font-family: sans-serif;">
diff --git a/apps/table.html b/apps/table.html
index d5e61c6b4..67b467c2b 100644
--- a/apps/table.html
+++ b/apps/table.html
@@ -126,9 +126,6 @@
 				<li class="nav-item active link">
 					<a class="nav-link" href="table.html"> <i class="fas fa-list-ul"></i> Slides</a>
 				</li>
-				<li class="nav-item link">
-					<a class="nav-link" href="Info.html"> <i class="fas fa-info-circle"></i> Info</a>
-				</li>
 				<!-- Notification Bell -->
 				<li class="nav-item dropdown" id="notifBell">
 					<a class="nav-link mt-1" href="#" id="navbarDropdown" role="button" data-toggle="dropdown" aria-haspopup="true" aria-expanded="false">
@@ -268,7 +265,7 @@ <h3>Steps for uploading.</h3>
 			<div>
 				<div class="">
 					<h3 class="text-center h3 mb-0">Available Slides</h3>
-					<div class="search-box float-left form-group form-inline">
+					<div class="search-box float-left form-group form-inline" style="margin-top: 1em;">
 						<select id='entries' class="select form-control mr-2">
 							<option value="10" selected>10 slides/page</option>
 							<option value="20">20 slides/page</option>
@@ -280,6 +277,9 @@ <h3 class="text-center h3 mb-0">Available Slides</h3>
 							<span class="fa fa-search form-control-feedback"></span>
 							<input id="search-table" type="text" class="form-control" placeholder="Search">
 						</div>
+						<a href="./Info.html" style="margin-left: 1em;">
+						<button type="button" class="btn btn-info"><i class="fas fa-info-circle"></i> Info</button>
+						</a>
 					</div>
 				</div>
 				<div class="table-responsive">

From 2e6f71b9a9cc16e47ee569a13df6f0356276af16 Mon Sep 17 00:00:00 2001
From: akhil-rana <akhilrana0001@gmail.com>
Date: Fri, 17 Apr 2020 11:19:47 +0530
Subject: [PATCH 02/19] add_tabs

---
 apps/Info.html  | 17 +++++++++++------
 apps/table.html | 13 +++++++++----
 2 files changed, 20 insertions(+), 10 deletions(-)

diff --git a/apps/Info.html b/apps/Info.html
index 6adc94f70..ba93e038a 100644
--- a/apps/Info.html
+++ b/apps/Info.html
@@ -80,14 +80,19 @@ <h1 class="h1">caMicroscope</h1>
 		<p>Digital pathology image viewer with support for human/machine generated annotations and markups.</p>
 	</div>
 
-	<div class="container">
-	<h3 class="text-center h3 mb-2" style="margin-top:8px;margin-bottom:10px;">Information Dashboard</h3>
-	<div class="form-group has-search" style="width: 27em; display:flex">
+	<div class="container" style="margin-top: 0.5em;">
+		<ul class="nav nav-tabs">
+			<li class="nav-item">
+			  <a class="nav-link" href="./table.html">Slides</a>
+			</li>
+			<li class="nav-item">
+			  <a class="nav-link active bg-info text-white" href="#">Info</a>
+			</li>
+	</ul>
+	<h3 class="text-center h3 mb-2" style="margin-top:-1.3em;">Information Dashboard</h3>
+	<div class="form-group has-search" style="width: 27em; margin-top:1em">
 		<span class="fa fa-search form-control-feedback"></span>
 		<input id="search-table" type="text" class="form-control" placeholder="Search">
-		<a href="./table.html" style="margin-left: 1em;">
-			<button type="button" class="btn btn-info">Slides</button>
-		</a>
 	</div>
 
   <div class="table-responsive" id="summary">
diff --git a/apps/table.html b/apps/table.html
index 67b467c2b..63f032cfb 100644
--- a/apps/table.html
+++ b/apps/table.html
@@ -264,7 +264,15 @@ <h3>Steps for uploading.</h3>
 
 			<div>
 				<div class="">
-					<h3 class="text-center h3 mb-0">Available Slides</h3>
+					<ul class="nav nav-tabs">
+						<li class="nav-item">
+						  <a class="nav-link active bg-info text-white" href="#">Slides</a>
+						</li>
+						<li class="nav-item">
+						  <a class="nav-link" href="./Info.html">Info</a>
+						</li>
+					</ul>
+					<h3 class="text-center h3 mb-0" style="margin-top: -1.3em;">Available Slides</h3>
 					<div class="search-box float-left form-group form-inline" style="margin-top: 1em;">
 						<select id='entries' class="select form-control mr-2">
 							<option value="10" selected>10 slides/page</option>
@@ -277,9 +285,6 @@ <h3 class="text-center h3 mb-0">Available Slides</h3>
 							<span class="fa fa-search form-control-feedback"></span>
 							<input id="search-table" type="text" class="form-control" placeholder="Search">
 						</div>
-						<a href="./Info.html" style="margin-left: 1em;">
-						<button type="button" class="btn btn-info"><i class="fas fa-info-circle"></i> Info</button>
-						</a>
 					</div>
 				</div>
 				<div class="table-responsive">

From 453542f718495953f6c36778a42b4afbac92f56f Mon Sep 17 00:00:00 2001
From: akhil-rana <akhilrana0001@gmail.com>
Date: Fri, 17 Apr 2020 18:02:15 +0530
Subject: [PATCH 03/19] change_position_again

---
 apps/Info.html  | 16 +++++++---------
 apps/table.html | 19 +++++++++----------
 2 files changed, 16 insertions(+), 19 deletions(-)

diff --git a/apps/Info.html b/apps/Info.html
index ba93e038a..ef1c50ec7 100644
--- a/apps/Info.html
+++ b/apps/Info.html
@@ -78,18 +78,16 @@
 	<div class="header text-center text-white bg-info p-4">
 		<h1 class="h1">caMicroscope</h1>
 		<p>Digital pathology image viewer with support for human/machine generated annotations and markups.</p>
+		<div style="align-content: center;">
+			<div class="btn-group" role="group">
+			<a href="./table.html">	<button style="border-color: white; border-radius: 5px 0 0 5px;" type="button" class="btn btn-secondary bg-info text-light">Table</button> </a>
+			<button type="button" style="border-color: white;" class="btn btn-secondary bg-white text-dark">Info</button>
+			</div>
+		</div>
 	</div>
 
 	<div class="container" style="margin-top: 0.5em;">
-		<ul class="nav nav-tabs">
-			<li class="nav-item">
-			  <a class="nav-link" href="./table.html">Slides</a>
-			</li>
-			<li class="nav-item">
-			  <a class="nav-link active bg-info text-white" href="#">Info</a>
-			</li>
-	</ul>
-	<h3 class="text-center h3 mb-2" style="margin-top:-1.3em;">Information Dashboard</h3>
+	<h3 class="text-center h3 mb-2" >Information Dashboard</h3>
 	<div class="form-group has-search" style="width: 27em; margin-top:1em">
 		<span class="fa fa-search form-control-feedback"></span>
 		<input id="search-table" type="text" class="form-control" placeholder="Search">
diff --git a/apps/table.html b/apps/table.html
index 63f032cfb..62d59d0b9 100644
--- a/apps/table.html
+++ b/apps/table.html
@@ -164,6 +164,13 @@ <h5>Notifications</h5>
 	<div class="header text-center text-white bg-info p-4">
 		<h1 class="h1">caMicroscope</h1>
 		<p>Digital pathology image viewer with support for human/machine generated annotations and markups.</p>
+		<div style="align-content: center;">
+			<div style="align-content: center;">
+				<div class="btn-group" role="group">
+				<button type="button" style="border-color: white;" class="btn btn-secondary bg-white text-dark">Table</button>
+				<a href="./Info.html">	<button style="border-color: white; border-radius: 0 5px 5px 0;" type="button" class="btn btn-secondary bg-info text-light">Info</button> </a></div>
+			</div>
+		</div>
 	</div>
 
 	<div class='p-2 bg-light' style="flex-grow: 1;">
@@ -263,16 +270,8 @@ <h3>Steps for uploading.</h3>
 		<div class="container">
 
 			<div>
-				<div class="">
-					<ul class="nav nav-tabs">
-						<li class="nav-item">
-						  <a class="nav-link active bg-info text-white" href="#">Slides</a>
-						</li>
-						<li class="nav-item">
-						  <a class="nav-link" href="./Info.html">Info</a>
-						</li>
-					</ul>
-					<h3 class="text-center h3 mb-0" style="margin-top: -1.3em;">Available Slides</h3>
+				<div class="" >
+					<h3 class="text-center h3 mb-0" >Available Slides</h3>
 					<div class="search-box float-left form-group form-inline" style="margin-top: 1em;">
 						<select id='entries' class="select form-control mr-2">
 							<option value="10" selected>10 slides/page</option>

From 52bdf3ab1d6d111187dd76ed19ddee4e9bc2f55b Mon Sep 17 00:00:00 2001
From: akhil-rana <akhilrana0001@gmail.com>
Date: Fri, 17 Apr 2020 18:17:07 +0530
Subject: [PATCH 04/19] icons

---
 apps/Info.html  | 6 +++---
 apps/table.html | 4 ++--
 2 files changed, 5 insertions(+), 5 deletions(-)

diff --git a/apps/Info.html b/apps/Info.html
index ef1c50ec7..5ae1cc25a 100644
--- a/apps/Info.html
+++ b/apps/Info.html
@@ -80,15 +80,15 @@ <h1 class="h1">caMicroscope</h1>
 		<p>Digital pathology image viewer with support for human/machine generated annotations and markups.</p>
 		<div style="align-content: center;">
 			<div class="btn-group" role="group">
-			<a href="./table.html">	<button style="border-color: white; border-radius: 5px 0 0 5px;" type="button" class="btn btn-secondary bg-info text-light">Table</button> </a>
-			<button type="button" style="border-color: white;" class="btn btn-secondary bg-white text-dark">Info</button>
+			<a href="./table.html">	<button style="border-color: white; border-radius: 5px 0 0 5px;" type="button" class="btn btn-secondary bg-info text-light"><i class="fas fa-list-alt"></i>  Slides</button> </a>
+			<button type="button" style="border-color: white;" class="btn btn-secondary bg-white text-dark"> <i class="fas fa-info-circle"></i> Info</button>
 			</div>
 		</div>
 	</div>
 
 	<div class="container" style="margin-top: 0.5em;">
 	<h3 class="text-center h3 mb-2" >Information Dashboard</h3>
-	<div class="form-group has-search" style="width: 27em; margin-top:1em">
+	<div class="form-group has-search" style="margin-top:1em">
 		<span class="fa fa-search form-control-feedback"></span>
 		<input id="search-table" type="text" class="form-control" placeholder="Search">
 	</div>
diff --git a/apps/table.html b/apps/table.html
index 62d59d0b9..06cb50c69 100644
--- a/apps/table.html
+++ b/apps/table.html
@@ -167,8 +167,8 @@ <h1 class="h1">caMicroscope</h1>
 		<div style="align-content: center;">
 			<div style="align-content: center;">
 				<div class="btn-group" role="group">
-				<button type="button" style="border-color: white;" class="btn btn-secondary bg-white text-dark">Table</button>
-				<a href="./Info.html">	<button style="border-color: white; border-radius: 0 5px 5px 0;" type="button" class="btn btn-secondary bg-info text-light">Info</button> </a></div>
+				<button type="button" style="border-color: white;" class="btn btn-secondary bg-white text-dark"><i class="fas fa-list-alt"></i>  Slides</button>
+				<a href="./Info.html">	<button style="border-color: white; border-radius: 0 5px 5px 0;" type="button" class="btn btn-secondary bg-info text-light"><i class="fas fa-info-circle"></i>  Info</button> </a></div>
 			</div>
 		</div>
 	</div>

From 0e2463ac0f725994fc356f63973d607afac98896 Mon Sep 17 00:00:00 2001
From: akhil-rana <akhilrana0001@gmail.com>
Date: Fri, 17 Apr 2020 22:40:24 +0530
Subject: [PATCH 05/19] Added_tooltips

---
 apps/Info.html  | 4 ++--
 apps/table.html | 4 ++--
 2 files changed, 4 insertions(+), 4 deletions(-)

diff --git a/apps/Info.html b/apps/Info.html
index 5ae1cc25a..5501abd9c 100644
--- a/apps/Info.html
+++ b/apps/Info.html
@@ -80,8 +80,8 @@ <h1 class="h1">caMicroscope</h1>
 		<p>Digital pathology image viewer with support for human/machine generated annotations and markups.</p>
 		<div style="align-content: center;">
 			<div class="btn-group" role="group">
-			<a href="./table.html">	<button style="border-color: white; border-radius: 5px 0 0 5px;" type="button" class="btn btn-secondary bg-info text-light"><i class="fas fa-list-alt"></i>  Slides</button> </a>
-			<button type="button" style="border-color: white;" class="btn btn-secondary bg-white text-dark"> <i class="fas fa-info-circle"></i> Info</button>
+			<a href="./table.html">	<button style="border-color: white; border-radius: 5px 0 0 5px;" type="button" class="btn btn-secondary bg-info text-light" title="Slides Table"><i class="fas fa-list-alt"></i>  Slides</button> </a>
+			<button type="button" style="border-color: white;" class="btn btn-secondary bg-white text-dark" title="Information Dashboard"> <i class="fas fa-info-circle"></i> Info</button>
 			</div>
 		</div>
 	</div>
diff --git a/apps/table.html b/apps/table.html
index 06cb50c69..d202b93f0 100644
--- a/apps/table.html
+++ b/apps/table.html
@@ -167,8 +167,8 @@ <h1 class="h1">caMicroscope</h1>
 		<div style="align-content: center;">
 			<div style="align-content: center;">
 				<div class="btn-group" role="group">
-				<button type="button" style="border-color: white;" class="btn btn-secondary bg-white text-dark"><i class="fas fa-list-alt"></i>  Slides</button>
-				<a href="./Info.html">	<button style="border-color: white; border-radius: 0 5px 5px 0;" type="button" class="btn btn-secondary bg-info text-light"><i class="fas fa-info-circle"></i>  Info</button> </a></div>
+				<button type="button" style="border-color: white;" class="btn btn-secondary bg-white text-dark" title="Slides Table"><i class="fas fa-list-alt"></i>  Slides</button>
+				<a href="./Info.html">	<button style="border-color: white; border-radius: 0 5px 5px 0;" type="button" class="btn btn-secondary bg-info text-light" title="Information Dashboard"><i class="fas fa-info-circle"></i>  Info</button> </a></div>
 			</div>
 		</div>
 	</div>

From ae02a408e00a394862caad64f46692e78d0c24b0 Mon Sep 17 00:00:00 2001
From: Ryan Birmingham <birm@rbirm.us>
Date: Fri, 29 May 2020 14:50:10 -0400
Subject: [PATCH 06/19] neaten up history a bit

---
 HISTORY.md | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/HISTORY.md b/HISTORY.md
index 636a2f8aa..64e390d72 100644
--- a/HISTORY.md
+++ b/HISTORY.md
@@ -22,9 +22,11 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
     * [1.0.x](#camicroscope-10)
 
 ### caMicroscope [Unreleased](https://github.com/camicroscope/camicroscope/compare/v3.7.5...camicroscope:develop)
-*
+###### TBD
+* TBD
 
 ### caMicroscope [3.7.5](https://github.com/camicroscope/camicroscope/compare/v3.7.4...camicroscope:v3.7.5)
+###### 2020-05-29
 * Safer HTML in table ([#401](https://github.com/camicroscope/caMicroscope/pull/401))
 
 

From f39111a8a6903b317c86d432113cdc06394f335f Mon Sep 17 00:00:00 2001
From: Ryan Birmingham <birm@rbirm.us>
Date: Wed, 3 Jun 2020 12:25:13 -0400
Subject: [PATCH 07/19] review status

---
 apps/table.js       |  9 +++++++--
 apps/viewer/init.js | 24 ++++++++++++++++++++++++
 core/Store.js       | 19 +++++++++++++++++++
 3 files changed, 50 insertions(+), 2 deletions(-)

diff --git a/apps/table.js b/apps/table.js
index 915931093..9f05bbf29 100644
--- a/apps/table.js
+++ b/apps/table.js
@@ -1,5 +1,5 @@
 function sanitize(string) {
-  string = string || ''
+  string = string || '';
   const map = {
     '&': '&amp;',
     '<': '&lt;',
@@ -97,6 +97,9 @@ const HeadMapping = [{
 }, {
   title: 'MPP',
   field: 'mpp',
+}, {
+  title: 'Review',
+  field: 'review',
 }];
 var totaltablepages;
 var selectedpage;
@@ -249,7 +252,9 @@ function initialize() {
                   const filename = d.location.split('/')[d.location.split('/').length - 1];
                   keys.forEach((key, i) => {
                     if (i == 0) rs.push(d['_id']['$oid']);
-                    else if (!d[key]) rs.push('');
+                    else if (key=='review') {
+                      rs.push(d[key]=='true'?`<label class="material-icons md-12" style="width:24px;color:green;" title="">check_circle_outline</label>`:``);
+                    } else if (!d[key]) rs.push('');
                     else rs.push(d[key]);
                   });
                   if (slideDeleteRequests['counter']) {
diff --git a/apps/viewer/init.js b/apps/viewer/init.js
index 85543951e..ba8de1726 100644
--- a/apps/viewer/init.js
+++ b/apps/viewer/init.js
@@ -841,6 +841,18 @@ async function initUIcomponents() {
       window.open('https://goo.gl/forms/mgyhx4ADH0UuEQJ53', '_blank').focus();
     },
   });
+  // -- view btn START -- //
+  if (!($D.params.data.hasOwnProperty('review') && $D.params.data['review']=='true')) {
+    console.log('create check');
+    subToolsOpt.push({
+      name: 'review',
+      icon: 'playlist_add_check',
+      title: 'has reviewed',
+      type: 'btn',
+      value: 'review',
+      callback: updateSlideView,
+    });
+  }
   subToolsOpt.push({
     name: 'tutorial',
     icon: 'help',
@@ -1180,3 +1192,15 @@ function redirect(url, text = '', sec = 5) {
     timer--;
   }, 1000);
 }
+
+function updateSlideView() {
+  if (!confirm(`Do you want to mark this slide as reviewed?`)) return;
+  Loading.open(document.body, 'changing review status ...');
+  $CAMIC.store.updateSlideReview($D.params.slideId, 'true').then(function(e) {
+    if (e.status==200) {
+      $UI.toolbar.getSubTool('review').style.display = 'none';
+    }
+  }).finally(function() {
+    Loading.close();
+  });
+}
diff --git a/core/Store.js b/core/Store.js
index 919eefb16..90c17ad01 100644
--- a/core/Store.js
+++ b/core/Store.js
@@ -778,6 +778,25 @@ class Store {
     });
   }
 
+  // Update slide review status
+  updateSlideReview(id, newStatus) {
+    const suffix = 'Slide/update';
+    const url = this.base + suffix;
+    console.log(id+ '   '+ newStatus);
+    const query = {
+      '_id': id,
+    };
+    const update = {
+      'review': newStatus,
+    };
+    return fetch(url + '?' + objToParamStr(query), {
+      method: 'POST',
+      credentials: 'include',
+      mode: 'cors',
+      body: JSON.stringify(update),
+    });
+  }
+
   /**
    * request creation of user
    * @param {object} email - the requested user email

From 7ed16312ea3d9166ca8f0baba7b8773dd53e1415 Mon Sep 17 00:00:00 2001
From: Ryan Birmingham <birm@rbirm.us>
Date: Wed, 3 Jun 2020 12:35:11 -0400
Subject: [PATCH 08/19] use unicode checkmark

---
 apps/table.js | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/apps/table.js b/apps/table.js
index 9f05bbf29..e74f49a61 100644
--- a/apps/table.js
+++ b/apps/table.js
@@ -253,7 +253,7 @@ function initialize() {
                   keys.forEach((key, i) => {
                     if (i == 0) rs.push(d['_id']['$oid']);
                     else if (key=='review') {
-                      rs.push(d[key]=='true'?`<label class="material-icons md-12" style="width:24px;color:green;" title="">check_circle_outline</label>`:``);
+                      rs.push(d[key]=='true'?`<labelstyle="color:green;">✓</label>`:``);
                     } else if (!d[key]) rs.push('');
                     else rs.push(d[key]);
                   });

From 1cf5497eb914f3460648354ecd6e978779697227 Mon Sep 17 00:00:00 2001
From: Ryan Birmingham <birm@rbirm.us>
Date: Wed, 3 Jun 2020 12:37:35 -0400
Subject: [PATCH 09/19] label style typo

---
 apps/table.js | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/apps/table.js b/apps/table.js
index e74f49a61..ae5684e78 100644
--- a/apps/table.js
+++ b/apps/table.js
@@ -253,7 +253,7 @@ function initialize() {
                   keys.forEach((key, i) => {
                     if (i == 0) rs.push(d['_id']['$oid']);
                     else if (key=='review') {
-                      rs.push(d[key]=='true'?`<labelstyle="color:green;">✓</label>`:``);
+                      rs.push(d[key]=='true'?`<label style="color:green;">✓</label>`:``);
                     } else if (!d[key]) rs.push('');
                     else rs.push(d[key]);
                   });

From 0099188eedd1b9b55ec4c71583835ffb4a7671c2 Mon Sep 17 00:00:00 2001
From: Ryan Birmingham <birm@rbirm.us>
Date: Wed, 3 Jun 2020 12:50:00 -0400
Subject: [PATCH 10/19] add review to readme

---
 README.md | 1 +
 1 file changed, 1 insertion(+)

diff --git a/README.md b/README.md
index c246d6b13..41f782eb1 100644
--- a/README.md
+++ b/README.md
@@ -41,6 +41,7 @@ The toolbar is in the top-left of the main content window. Use the toolbar butto
 | ![](https://fonts.gstatic.com/s/i/materialicons/timeline/v6/24px.svg)      | Segment      | This tool allows you to display, count, and export nuclear segmentations on the image. Clicking this tool opens the following custom toolbar. |
 | ![](https://fonts.gstatic.com/s/i/materialicons/aspect_ratio/v4/24px.svg)      | Model      | Show results from a pre-trained tensorflow compatible model on a ROI of the slide. |
 | ![](https://fonts.gstatic.com/s/i/materialicons/get_app/v4/24px.svg)      | Download Slide      | Download the slide image to your system |
+| ![](https://fonts.gstatic.com/s/i/materialicons/playlist_add_check/v8/24px.svg)      | Mark Reviewed      | Use to signify the completion of review of a slide. |
 | ![](https://fonts.gstatic.com/s/i/materialicons/bug_report/v4/24px.svg)      | Bug Report      | Report a bug or give feedback. |
 | ![](https://fonts.gstatic.com/s/i/materialicons/help/v4/24px.svg)      | Tutorial      | Click to view a guided tour of the viewer tools. |
 

From f4d9990047098055916c676526323124de5ab90b Mon Sep 17 00:00:00 2001
From: Ryan Birmingham <birm@rbirm.us>
Date: Mon, 8 Jun 2020 11:27:38 -0400
Subject: [PATCH 11/19] reposition store

---
 apps/signup/signup.html | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/apps/signup/signup.html b/apps/signup/signup.html
index 9f1e1788f..6391d1eaf 100644
--- a/apps/signup/signup.html
+++ b/apps/signup/signup.html
@@ -35,6 +35,7 @@
 
 
   </head>
+  <script src="../../core/Store.js"></script>
   <script src="./signup.js"></script>
 
   <body>
@@ -119,7 +120,6 @@ <h2 style="margin-top: -.5em;">User Signup</h2>
 
 
     <script src="../../common/util.js"></script>
-    <script src="../../core/Store.js"></script>
 
   </body>
 </html>

From 36975381a6c7464c16e6a9b7e126a28a0df3224d Mon Sep 17 00:00:00 2001
From: Ryan Birmingham <birm@rbirm.us>
Date: Mon, 8 Jun 2020 11:31:32 -0400
Subject: [PATCH 12/19] finish fixing store in signup

---
 apps/signup/signup.js | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/apps/signup/signup.js b/apps/signup/signup.js
index 9936ee8b2..ebdc1897c 100644
--- a/apps/signup/signup.js
+++ b/apps/signup/signup.js
@@ -1,7 +1,7 @@
 var userSignupUrl = "../../data/User/post";
 var protoTokenUrl = "../../auth/Token/proto";
 var permissions;
-const store = new Store('../data/');
+const store = new Store('../../data/');
 
 function addUser(){
   var email = document.getElementById("mail").value

From 09c1344f23b864b3527574b250f87cfce990cc0a Mon Sep 17 00:00:00 2001
From: Ryan Birmingham <birm@rbirm.us>
Date: Mon, 8 Jun 2020 11:32:27 -0400
Subject: [PATCH 13/19] store getUserPermissions

---
 apps/signup/signup.js | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/apps/signup/signup.js b/apps/signup/signup.js
index ebdc1897c..44b745ba9 100644
--- a/apps/signup/signup.js
+++ b/apps/signup/signup.js
@@ -17,7 +17,7 @@ function addUser(){
     userType = "Editor"
   }
 
-  getUserPermissions(getUserType())
+  store.getUserPermissions(getUserType())
     .then(response => response.text())
     .then((data) => {
     return (data ? JSON.parse(data) : null);

From 97db2cfbe1bdb66b4fbfe270a11ab72989cdade9 Mon Sep 17 00:00:00 2001
From: Ryan Birmingham <birm@rbirm.us>
Date: Sat, 20 Jun 2020 00:39:39 -0400
Subject: [PATCH 14/19] what broke the table

---
 apps/table.html | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/apps/table.html b/apps/table.html
index 3d2dc3e6c..cabbecd5b 100644
--- a/apps/table.html
+++ b/apps/table.html
@@ -252,9 +252,8 @@ <h3>Steps for uploading.</h3>
 				<div class="" >
 					<h3 class="text-center h3 mb-0" >Available Slides</h3>
 					<div class="search-box float-left form-group form-inline" style="margin-top: 1em;">
-
+				</div>
 				<div class="">
-					<h3 class="text-center h3 mb-0">Available Slides</h3>
 					<div class="row mt-2" id="filters-heading">
 					</div>
 					<div class="row mb-2 ml-1" id="filters-check" >

From 791183576775423d7c31b0a2498d5a0f1f56444c Mon Sep 17 00:00:00 2001
From: Ryan Birmingham <birm@rbirm.us>
Date: Tue, 23 Jun 2020 11:57:38 -0400
Subject: [PATCH 15/19] config.name to config.config_name

---
 core/Store.js | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/core/Store.js b/core/Store.js
index 90c17ad01..11ac4540e 100644
--- a/core/Store.js
+++ b/core/Store.js
@@ -629,7 +629,7 @@ class Store {
     const suffix = 'Configuration/find';
     const url = this.base + suffix;
     const query = {
-      'name': name,
+      'config_name': name,
     };
 
     return fetch(url + '?' + objToParamStr(query), {

From e6ff5a9269e8960ef7c9141774998ff78d4175a8 Mon Sep 17 00:00:00 2001
From: Ryan Birmingham <birm@rbirm.us>
Date: Tue, 23 Jun 2020 14:55:47 -0400
Subject: [PATCH 16/19] correct findMark slide location

---
 core/Store.js | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/core/Store.js b/core/Store.js
index 11ac4540e..98776237d 100644
--- a/core/Store.js
+++ b/core/Store.js
@@ -101,7 +101,7 @@ class Store {
     const query = {};
     let bySlideId;
     if (slide) {
-      query.slide = slide;
+      query['provenance.image.slide'] = slide;
     }
     if (name) {
       query['provenance.analysis.execution_id'] = name;

From 407784081b84cbbdfaa8595b76631f1f956b89fe Mon Sep 17 00:00:00 2001
From: Ryan Birmingham <birm@rbirm.us>
Date: Tue, 23 Jun 2020 15:05:52 -0400
Subject: [PATCH 17/19] use multi for all for now

---
 core/Store.js | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/core/Store.js b/core/Store.js
index 98776237d..c142e8b69 100644
--- a/core/Store.js
+++ b/core/Store.js
@@ -96,7 +96,7 @@ class Store {
    * @return {promise} - promise which resolves with data
    **/
   findMark(slide, name, footprint, source, x0, x1, y0, y1) {
-    const suffix = 'Mark/find';
+    const suffix = 'Mark/multi';
     const url = this.base + suffix;
     const query = {};
     let bySlideId;
@@ -104,7 +104,9 @@ class Store {
       query['provenance.image.slide'] = slide;
     }
     if (name) {
-      query['provenance.analysis.execution_id'] = name;
+      let ids = [name]
+      const stringifiedIds = ids.map((id) => `"${id}"`).join(',');
+      query.nameList = `[${stringifiedIds}]`;
     }
     if (footprint) {
       query.footprint = footprint;

From 184cf3658105336f344f079119db6dd972a50070 Mon Sep 17 00:00:00 2001
From: Ryan Birmingham <birm@rbirm.us>
Date: Tue, 23 Jun 2020 15:36:00 -0400
Subject: [PATCH 18/19] style fix

---
 core/Store.js | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/core/Store.js b/core/Store.js
index c142e8b69..90ae013dd 100644
--- a/core/Store.js
+++ b/core/Store.js
@@ -104,7 +104,7 @@ class Store {
       query['provenance.image.slide'] = slide;
     }
     if (name) {
-      let ids = [name]
+      let ids = [name];
       const stringifiedIds = ids.map((id) => `"${id}"`).join(',');
       query.nameList = `[${stringifiedIds}]`;
     }

From 211488131fb85f9f2c28d322fbcf991805bc8013 Mon Sep 17 00:00:00 2001
From: Ryan Birmingham <birm@rbirm.us>
Date: Tue, 23 Jun 2020 16:29:36 -0400
Subject: [PATCH 19/19] use spatial instead of multi for segments

---
 core/Store.js | 6 ++----
 1 file changed, 2 insertions(+), 4 deletions(-)

diff --git a/core/Store.js b/core/Store.js
index 90ae013dd..178f8bd66 100644
--- a/core/Store.js
+++ b/core/Store.js
@@ -96,7 +96,7 @@ class Store {
    * @return {promise} - promise which resolves with data
    **/
   findMark(slide, name, footprint, source, x0, x1, y0, y1) {
-    const suffix = 'Mark/multi';
+    const suffix = 'Mark/spatial';
     const url = this.base + suffix;
     const query = {};
     let bySlideId;
@@ -104,9 +104,7 @@ class Store {
       query['provenance.image.slide'] = slide;
     }
     if (name) {
-      let ids = [name];
-      const stringifiedIds = ids.map((id) => `"${id}"`).join(',');
-      query.nameList = `[${stringifiedIds}]`;
+      query['provenance.analysis.execution_id'] = name;
     }
     if (footprint) {
       query.footprint = footprint;