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gene_name.py filter of fragments, no gene name, and duplicates #91

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dagopian opened this issue Sep 22, 2020 · 0 comments
Open

gene_name.py filter of fragments, no gene name, and duplicates #91

dagopian opened this issue Sep 22, 2020 · 0 comments
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  • Fragments are taged as 'no gene name' if fragment is set a true in config file. Shouldn't it be something else ? Like 'Fragment' or so.

  • Proteins with no gene name are taged as 'no gene name' which is fine. BUT if noname is set to false and ducplicate to true in the config file, all the 'no gene name' proteins are consider as duplicates and removed when they should be kept.
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