.pre-commit-config.yaml

# All available hooks: https://pre-commit.com/hooks.html
# R specific hooks: https://github.com/lorenzwalthert/precommit
repos:
-   repo: https://github.com/lorenzwalthert/precommit
    rev: v0.4.2
    hooks:
    -   id: style-files
        args: [--style_pkg=styler, --style_fun=tidyverse_style]
        require_serial: true
    -   id: use-tidy-description
    -   id: lintr
    -   id: readme-rmd-rendered
        exclude: ^python/
    -   id: parsable-R
    -   id: no-browser-statement
    -   id: no-debug-statement
    -   id: deps-in-desc
        args: [--allow_private_imports]
-   repo: https://github.com/pre-commit/pre-commit-hooks
    rev: v4.4.0
    hooks:
    -   id: check-added-large-files
        args: ['--maxkb=200']
    -   id: file-contents-sorter
        files: '^\.Rbuildignore$'
    -   id: end-of-file-fixer
        exclude: '\.Rd'
    -   id: mixed-line-ending
        args: ['--fix=no']
-   repo: local
    hooks:
    -   id: forbid-to-commit
        name: Don't commit common R artifacts
        entry: Cannot commit .Rhistory, .RData, .Rds or .rds.
        language: fail
        files: '\.(Rhistory|RData|Rds|rds)$'
    -   id: check-vars-dict
        name: Validate vars_dict
        entry: Rscript scripts/check-vars-dict.R
        files: data/vars_dict.rda
        language: r
-   repo: https://github.com/astral-sh/ruff-pre-commit
    rev: v0.7.4
    hooks:
      # Python linter. Ruff recommends running this before the formatter to
      # avoid conflicts when using the --fix flag
      - id: ruff
        args:
          - --fix
        files: ^python/
      # Formatter
      - id: ruff-format
        files: ^python/