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Combined Metropolis, RescalingStep samplers. #55

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merged 2 commits into from
Mar 4, 2015

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bas-rustenburg
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Running sampling for 1000000 steps to test.

@bas-rustenburg
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Here is the data, fixing the bug so we're using both Metropolis and RescalingStep at once.

1,000,000 steps, 10000 burn-in, thinning period of 25:

sample-deltag
sample-deltah
sample-deltah_0
sample-ls
sample-p0
sample-sigma
sample-subtracted

@jchodera
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jchodera commented Mar 4, 2015 via email

@bas-rustenburg
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@jchodera see #54, I added the comparison there.

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Switched back to using Metropolis only, but leaving the fixed implementation of RescalingStep for if we change our minds.

bas-rustenburg added a commit that referenced this pull request Mar 4, 2015
Combined Metropolis, RescalingStep samplers.
@bas-rustenburg bas-rustenburg merged commit 53a3b0c into choderalab:master Mar 4, 2015
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2 participants