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Adding prefixes for Cancogen
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4 files changed

+260
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lines changed

web/templates/canada_covid19/locales/fr/schema.json

+104
Original file line numberDiff line numberDiff line change
@@ -12,9 +12,113 @@
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"prefix_prefix": "linkml",
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"prefix_reference": "https://w3id.org/linkml/"
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},
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"BTO": {
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"prefix_prefix": "BTO",
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"prefix_reference": "http://purl.obolibrary.org/obo/BTO_"
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},
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"CIDO": {
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"prefix_prefix": "CIDO",
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"prefix_reference": "http://purl.obolibrary.org/obo/CIDO_"
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},
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"CLO": {
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"prefix_prefix": "CLO",
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"prefix_reference": "http://purl.obolibrary.org/obo/CLO_"
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},
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"DOID": {
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"prefix_prefix": "DOID",
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"prefix_reference": "http://purl.obolibrary.org/obo/DOID_"
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},
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"ECTO": {
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"prefix_prefix": "ECTO",
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"prefix_reference": "http://purl.obolibrary.org/obo/ECTO_"
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},
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"EFO": {
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"prefix_prefix": "EFO",
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"prefix_reference": "http://purl.obolibrary.org/obo/EFO_"
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},
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"ENVO": {
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"prefix_prefix": "ENVO",
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"prefix_reference": "http://purl.obolibrary.org/obo/ENVO_"
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},
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"FOODON": {
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"prefix_prefix": "FOODON",
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"prefix_reference": "http://purl.obolibrary.org/obo/FOODON_"
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},
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"GAZ": {
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"prefix_prefix": "GAZ",
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"prefix_reference": "http://purl.obolibrary.org/obo/GAZ_"
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},
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"GENEPIO": {
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"prefix_prefix": "GENEPIO",
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"prefix_reference": "http://purl.obolibrary.org/obo/GENEPIO_"
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},
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"GSSO": {
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"prefix_prefix": "GSSO",
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"prefix_reference": "http://purl.obolibrary.org/obo/GSSO_"
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},
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"HP": {
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"prefix_prefix": "HP",
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"prefix_reference": "http://purl.obolibrary.org/obo/HP_"
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},
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"IDO": {
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"prefix_prefix": "IDO",
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"prefix_reference": "http://purl.obolibrary.org/obo/IDO_"
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},
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"MP": {
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"prefix_prefix": "MP",
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"prefix_reference": "http://purl.obolibrary.org/obo/MP_"
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},
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"MMO": {
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"prefix_prefix": "MMO",
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"prefix_reference": "http://purl.obolibrary.org/obo/MMO_"
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},
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"MONDO": {
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"prefix_prefix": "MONDO",
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"prefix_reference": "http://purl.obolibrary.org/obo/MONDO_"
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},
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"MPATH": {
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"prefix_prefix": "MPATH",
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"prefix_reference": "http://purl.obolibrary.org/obo/MPATH_"
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},
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"NCIT": {
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"prefix_prefix": "NCIT",
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"prefix_reference": "http://purl.obolibrary.org/obo/NCIT_"
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},
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"NCBITaxon": {
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"prefix_prefix": "NCBITaxon",
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"prefix_reference": "http://purl.obolibrary.org/obo/NCBITaxon_"
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},
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"NBO": {
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"prefix_prefix": "NBO",
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"prefix_reference": "http://purl.obolibrary.org/obo/NBO_"
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},
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"OBI": {
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"prefix_prefix": "OBI",
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"prefix_reference": "http://purl.obolibrary.org/obo/OBI_"
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},
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"OMRSE": {
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"prefix_prefix": "OMRSE",
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"prefix_reference": "http://purl.obolibrary.org/obo/OMRSE_"
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},
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"PCO": {
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"prefix_prefix": "PCO",
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"prefix_reference": "http://purl.obolibrary.org/obo/PCO_"
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},
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"TRANS": {
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"prefix_prefix": "TRANS",
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"prefix_reference": "http://purl.obolibrary.org/obo/TRANS_"
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},
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"UBERON": {
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"prefix_prefix": "UBERON",
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"prefix_reference": "http://purl.obolibrary.org/obo/UBERON_"
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},
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"UO": {
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"prefix_prefix": "UO",
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"prefix_reference": "http://purl.obolibrary.org/obo/UO_"
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},
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"VO": {
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"prefix_prefix": "VO",
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"prefix_reference": "http://purl.obolibrary.org/obo/VO_"
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}
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},
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"default_prefix": "https://example.com/CanCOGeN_Covid-19/",

web/templates/canada_covid19/locales/fr/schema.yaml

+26
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@@ -7,7 +7,33 @@ imports:
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- linkml:types
88
prefixes:
99
linkml: https://w3id.org/linkml/
10+
BTO: http://purl.obolibrary.org/obo/BTO_
11+
CIDO: http://purl.obolibrary.org/obo/CIDO_
12+
CLO: http://purl.obolibrary.org/obo/CLO_
13+
DOID: http://purl.obolibrary.org/obo/DOID_
14+
ECTO: http://purl.obolibrary.org/obo/ECTO_
15+
EFO: http://purl.obolibrary.org/obo/EFO_
16+
ENVO: http://purl.obolibrary.org/obo/ENVO_
17+
FOODON: http://purl.obolibrary.org/obo/FOODON_
18+
GAZ: http://purl.obolibrary.org/obo/GAZ_
1019
GENEPIO: http://purl.obolibrary.org/obo/GENEPIO_
20+
GSSO: http://purl.obolibrary.org/obo/GSSO_
21+
HP: http://purl.obolibrary.org/obo/HP_
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IDO: http://purl.obolibrary.org/obo/IDO_
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MP: http://purl.obolibrary.org/obo/MP_
24+
MMO: http://purl.obolibrary.org/obo/MMO_
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MONDO: http://purl.obolibrary.org/obo/MONDO_
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MPATH: http://purl.obolibrary.org/obo/MPATH_
27+
NCIT: http://purl.obolibrary.org/obo/NCIT_
28+
NCBITaxon: http://purl.obolibrary.org/obo/NCBITaxon_
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NBO: http://purl.obolibrary.org/obo/NBO_
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OBI: http://purl.obolibrary.org/obo/OBI_
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OMRSE: http://purl.obolibrary.org/obo/OMRSE_
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PCO: http://purl.obolibrary.org/obo/PCO_
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TRANS: http://purl.obolibrary.org/obo/TRANS_
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UBERON: http://purl.obolibrary.org/obo/UBERON_
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UO: http://purl.obolibrary.org/obo/UO_
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VO: http://purl.obolibrary.org/obo/VO_
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classes:
1238
dh_interface:
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name: dh_interface

web/templates/canada_covid19/schema.json

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@@ -12,10 +12,114 @@
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"prefix_prefix": "linkml",
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"prefix_reference": "https://w3id.org/linkml/"
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},
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"BTO": {
16+
"prefix_prefix": "BTO",
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"prefix_reference": "http://purl.obolibrary.org/obo/BTO_"
18+
},
19+
"CIDO": {
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"prefix_prefix": "CIDO",
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"prefix_reference": "http://purl.obolibrary.org/obo/CIDO_"
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},
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"CLO": {
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"prefix_prefix": "CLO",
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"prefix_reference": "http://purl.obolibrary.org/obo/CLO_"
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},
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"DOID": {
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"prefix_prefix": "DOID",
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"prefix_reference": "http://purl.obolibrary.org/obo/DOID_"
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},
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"ECTO": {
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"prefix_prefix": "ECTO",
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"prefix_reference": "http://purl.obolibrary.org/obo/ECTO_"
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},
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"EFO": {
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"prefix_prefix": "EFO",
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"prefix_reference": "http://purl.obolibrary.org/obo/EFO_"
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},
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"ENVO": {
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"prefix_prefix": "ENVO",
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"prefix_reference": "http://purl.obolibrary.org/obo/ENVO_"
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},
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"FOODON": {
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"prefix_prefix": "FOODON",
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"prefix_reference": "http://purl.obolibrary.org/obo/FOODON_"
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},
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"GAZ": {
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"prefix_prefix": "GAZ",
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"prefix_reference": "http://purl.obolibrary.org/obo/GAZ_"
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},
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"GENEPIO": {
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"prefix_prefix": "GENEPIO",
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"prefix_reference": "http://purl.obolibrary.org/obo/GENEPIO_"
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},
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"GSSO": {
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"prefix_prefix": "GSSO",
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"prefix_reference": "http://purl.obolibrary.org/obo/GSSO_"
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},
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"HP": {
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"prefix_prefix": "HP",
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"prefix_reference": "http://purl.obolibrary.org/obo/HP_"
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},
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"IDO": {
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"prefix_prefix": "IDO",
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"prefix_reference": "http://purl.obolibrary.org/obo/IDO_"
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},
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"MP": {
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"prefix_prefix": "MP",
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"prefix_reference": "http://purl.obolibrary.org/obo/MP_"
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},
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"MMO": {
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"prefix_prefix": "MMO",
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"prefix_reference": "http://purl.obolibrary.org/obo/MMO_"
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},
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"MONDO": {
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"prefix_prefix": "MONDO",
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"prefix_reference": "http://purl.obolibrary.org/obo/MONDO_"
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},
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"MPATH": {
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"prefix_prefix": "MPATH",
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"prefix_reference": "http://purl.obolibrary.org/obo/MPATH_"
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},
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"NCIT": {
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"prefix_prefix": "NCIT",
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"prefix_reference": "http://purl.obolibrary.org/obo/NCIT_"
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},
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"NCBITaxon": {
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"prefix_prefix": "NCBITaxon",
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"prefix_reference": "http://purl.obolibrary.org/obo/NCBITaxon_"
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},
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"NBO": {
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"prefix_prefix": "NBO",
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"prefix_reference": "http://purl.obolibrary.org/obo/NBO_"
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},
95+
"OBI": {
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"prefix_prefix": "OBI",
97+
"prefix_reference": "http://purl.obolibrary.org/obo/OBI_"
98+
},
99+
"OMRSE": {
100+
"prefix_prefix": "OMRSE",
101+
"prefix_reference": "http://purl.obolibrary.org/obo/OMRSE_"
102+
},
103+
"PCO": {
104+
"prefix_prefix": "PCO",
105+
"prefix_reference": "http://purl.obolibrary.org/obo/PCO_"
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},
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"TRANS": {
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"prefix_prefix": "TRANS",
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"prefix_reference": "http://purl.obolibrary.org/obo/TRANS_"
110+
},
111+
"UBERON": {
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"prefix_prefix": "UBERON",
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"prefix_reference": "http://purl.obolibrary.org/obo/UBERON_"
114+
},
115+
"UO": {
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"prefix_prefix": "UO",
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"prefix_reference": "http://purl.obolibrary.org/obo/UO_"
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},
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"VO": {
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"prefix_prefix": "VO",
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"prefix_reference": "http://purl.obolibrary.org/obo/VO_"
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},
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"xsd": {
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"prefix_prefix": "xsd",
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"prefix_reference": "http://www.w3.org/2001/XMLSchema#"

web/templates/canada_covid19/schema.yaml

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@@ -9,7 +9,33 @@ imports:
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- linkml:types
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prefixes:
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linkml: https://w3id.org/linkml/
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BTO: http://purl.obolibrary.org/obo/BTO_
13+
CIDO: http://purl.obolibrary.org/obo/CIDO_
14+
CLO: http://purl.obolibrary.org/obo/CLO_
15+
DOID: http://purl.obolibrary.org/obo/DOID_
16+
ECTO: http://purl.obolibrary.org/obo/ECTO_
17+
EFO: http://purl.obolibrary.org/obo/EFO_
18+
ENVO: http://purl.obolibrary.org/obo/ENVO_
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FOODON: http://purl.obolibrary.org/obo/FOODON_
20+
GAZ: http://purl.obolibrary.org/obo/GAZ_
1221
GENEPIO: http://purl.obolibrary.org/obo/GENEPIO_
22+
GSSO: http://purl.obolibrary.org/obo/GSSO_
23+
HP: http://purl.obolibrary.org/obo/HP_
24+
IDO: http://purl.obolibrary.org/obo/IDO_
25+
MP: http://purl.obolibrary.org/obo/MP_
26+
MMO: http://purl.obolibrary.org/obo/MMO_
27+
MONDO: http://purl.obolibrary.org/obo/MONDO_
28+
MPATH: http://purl.obolibrary.org/obo/MPATH_
29+
NCIT: http://purl.obolibrary.org/obo/NCIT_
30+
NCBITaxon: http://purl.obolibrary.org/obo/NCBITaxon_
31+
NBO: http://purl.obolibrary.org/obo/NBO_
32+
OBI: http://purl.obolibrary.org/obo/OBI_
33+
OMRSE: http://purl.obolibrary.org/obo/OMRSE_
34+
PCO: http://purl.obolibrary.org/obo/PCO_
35+
TRANS: http://purl.obolibrary.org/obo/TRANS_
36+
UBERON: http://purl.obolibrary.org/obo/UBERON_
37+
UO: http://purl.obolibrary.org/obo/UO_
38+
VO: http://purl.obolibrary.org/obo/VO_
1339
classes:
1440
dh_interface:
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name: dh_interface

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