build.gradle

plugins {
    id "application"
    id "org.jetbrains.kotlin.jvm" version "1.9.22"
    id "com.github.johnrengelman.shadow" version "8.1.1"
}

repositories {
    mavenCentral()
    maven {
        url "https://maven.scijava.org/content/groups/public"
    }
}

def kotlinVersion = "1.9.22"
def DepVersionCommonsMath = "3.1.1"
def DepVersionJRuby = "1.7.0"
def VersionInfoFilename = "src/main/resources/edu/stanford/cfuller/imageanalysistools/resources/version_info.xml"
def bioFormatsVersion = "6.13.0"

def Version = "7.0.0"

task updateVersionInfo(type: Exec) {
    commandLine "sh", "-c", (
            "echo \"<library version=\\\"$Version\\\" commit=\\\"`git log -1 --pretty=format:%H`\\\">" +
                    "</library>\" > $VersionInfoFilename")
}

dependencies {
    implementation "org.jetbrains.kotlin:kotlin-reflect:$kotlinVersion"
    implementation "org.slf4j:slf4j-simple:1.7.21"
    testImplementation "junit:junit:4.10"
    testImplementation "io.kotlintest:kotlintest:1.3.7"
    implementation "org.apache.commons:commons-math3:$DepVersionCommonsMath"
    implementation "org.jruby:jruby:$DepVersionJRuby"
    implementation "javax.xml.bind:jaxb-api:2.3.1"
    implementation "net.imagej:ij:1.54h"
    implementation "ome:formats-bsd:$bioFormatsVersion"
    implementation "ome:formats-gpl:$bioFormatsVersion"

}

build.dependsOn updateVersionInfo

mainClassName = "edu.stanford.cfuller.analysistoolsinterface.Main"

jar {
    manifest {
        attributes "Main-Class": mainClassName
    }
}

test {
    environment "PROJECT_ROOT", "$projectDir"
}