new dev branch for v5.9.1-rc

clawpack · Sep 27, 2023 · 69536b5 · 69536b5
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diff --git a/dev/.buildinfo b/dev/.buildinfo
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 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: a4fc40bc02fc1530c5b7e9cd8d4d0b30
+config: 0f6ffb5660d60a2950039a4ce83fe555
 tags: 645f666f9bcd5a90fca523b33c5a78b7
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diff --git a/dev/.doctrees/user_routines.doctree b/dev/.doctrees/user_routines.doctree
diff --git a/dev/.doctrees/visit_plotting.doctree b/dev/.doctrees/visit_plotting.doctree
diff --git a/dev/.doctrees/vm.doctree b/dev/.doctrees/vm.doctree
diff --git a/dev/.doctrees/wp_algorithms.doctree b/dev/.doctrees/wp_algorithms.doctree
diff --git a/dev/ClawPlotAxes.html b/dev/ClawPlotAxes.html
diff --git a/dev/ClawPlotData.html b/dev/ClawPlotData.html
diff --git a/dev/ClawPlotFigure.html b/dev/ClawPlotFigure.html
@@ -1,21 +1,23 @@
 
 <!DOCTYPE html>
 
-<html xmlns="http://www.w3.org/1999/xhtml">
+<html lang="en">
   <head>
     <meta charset="utf-8" />
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.19: https://docutils.sourceforge.io/" />
+
     <title>ClawPlotFigure &#8212; Clawpack dev documentation</title>
-    <link rel="stylesheet" href="_static/flasky.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="_static/base.css" type="text/css" />
     <link rel="stylesheet" href="_static/layout.css" type="text/css" />
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/flasky.css" />
     <link rel="stylesheet" type="text/css" href="_static/graphviz.css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
+    <script src="_static/_sphinx_javascript_frameworks_compat.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
+    <script src="_static/sphinx_highlight.js"></script>
     <link rel="shortcut icon" href="_static/clawicon.ico"/>
     <link rel="author" title="About these documents" href="about.html" />
     <link rel="index" title="Index" href="genindex.html" />
@@ -74,7 +76,8 @@ <h3>Navigation</h3>
              accesskey="P">previous</a> |</li>
         <li class="nav-item nav-item-0"><a href="contents.html">Clawpack dev documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="plotting.html" >Plotting with Visclaw</a> &#187;</li>
-          <li class="nav-item nav-item-2"><a href="setplot.html" accesskey="U">Using setplot.py to specify the desired plots</a> &#187;</li> 
+          <li class="nav-item nav-item-2"><a href="setplot.html" accesskey="U">Using setplot.py to specify the desired plots</a> &#187;</li>
+        <li class="nav-item nav-item-this"><a href="">ClawPlotFigure</a></li> 
       </ul>
     </div>  
 
@@ -83,32 +86,47 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
           <div class="body" role="main">
 
-  <div class="section" id="clawplotfigure">
-<span id="id1"></span><h1>ClawPlotFigure<a class="headerlink" href="#clawplotfigure" title="Permalink to this headline">¶</a></h1>
+  <section id="clawplotfigure">
+<span id="id1"></span><h1>ClawPlotFigure<a class="headerlink" href="#clawplotfigure" title="Permalink to this heading">¶</a></h1>
 <p>For usage see <a class="reference internal" href="setplot.html#setplot"><span class="std std-ref">Using setplot.py to specify the desired plots</span></a> and <a class="reference internal" href="plotexamples.html#plotexamples"><span class="std std-ref">Plotting examples</span></a>.</p>
 <p>Objects of this class are usually created by the new_plotfigure method of a
 <a class="reference internal" href="ClawPlotData.html#clawplotdata"><span class="std std-ref">ClawPlotData</span></a> object.</p>
-<dl class="class">
-<dt id="ClawPlotFigure">
-<em class="property">class </em><code class="sig-name descname">ClawPlotFigure</code><a class="headerlink" href="#ClawPlotFigure" title="Permalink to this definition">¶</a></dt>
+<dl class="py class">
+<dt class="sig sig-object py" id="ClawPlotFigure">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">ClawPlotFigure</span></span><a class="headerlink" href="#ClawPlotFigure" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<div class="section" id="attributes">
-<h2>Attributes<a class="headerlink" href="#attributes" title="Permalink to this headline">¶</a></h2>
+<section id="attributes">
+<h2>Attributes<a class="headerlink" href="#attributes" title="Permalink to this heading">¶</a></h2>
 <blockquote>
 <div><p>The following attributes can be set by the user:</p>
-<dl class="attribute">
-<dt>
-<code class="sig-name descname">figno : int</code></dt>
+<dl class="py attribute">
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">figno</span> <span class="pre">:</span> <span class="pre">int</span></span></dt>
 <dd><p>Figure number, by default the next unused number will be used (starting
 at 1001).
 This is usually set as an argument to the new_plotfigure function
 of a <a class="reference internal" href="ClawPlotData.html#clawplotdata"><span class="std std-ref">ClawPlotData</span></a> object</p>
 </dd></dl>
 
-<dl class="attribute">
-<dt>
-<code class="sig-name descname">kwargs : dictionary</code></dt>
+<dl class="py attribute">
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">figsize</span> <span class="pre">:</span> <span class="pre">tuple</span></span></dt>
+<dd><p>Figure size in (x,y) as in matplotlib.</p>
+</dd></dl>
+
+<dl class="py attribute">
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">facecolor</span> <span class="pre">:</span> <span class="pre">color</span></span></dt>
+<dd><p>Color for the background of the figure (behind the axes).
+By default (if <cite>facecolor is None</cite>) the clawpack theme tan color is used.</p>
+<p>For plots to be included in publications you probably want to use
+<cite>‘w’</cite> for a white background instead.</p>
+</dd></dl>
+
+<dl class="py attribute">
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">kwargs</span> <span class="pre">:</span> <span class="pre">dictionary</span></span></dt>
 <dd><p>A dictionary of keyword arguments for the figure command.
 For example:</p>
 <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="s2">&quot;{&#39;figsize&#39;:[12,5], &#39;facecolor&#39;:[1,0,0]}&quot;</span>
@@ -121,43 +139,44 @@ <h2>Attributes<a class="headerlink" href="#attributes" title="Permalink to this
 for the <a class="reference external" href="http://matplotlib.sourceforge.net/api/figure_api.html#matplotlib.figure.Figure">figure command</a>.</p>
 </dd></dl>
 
-<dl class="attribute">
-<dt>
-<code class="sig-name descname">clf_each_frame : bool</code></dt>
+<dl class="py attribute">
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">clf_each_frame</span> <span class="pre">:</span> <span class="pre">bool</span></span></dt>
 <dd><p>If True, clear the figure with a clf command at the start of each frame.</p>
 </dd></dl>
 
-<dl class="attribute">
-<dt>
-<code class="sig-name descname">show : bool</code></dt>
+<dl class="py attribute">
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">show</span> <span class="pre">:</span> <span class="pre">bool</span></span></dt>
 <dd><p>If False, suppress showing this figure.</p>
 </dd></dl>
 
 </div></blockquote>
-</div>
-<div class="section" id="methods">
-<h2>Methods<a class="headerlink" href="#methods" title="Permalink to this headline">¶</a></h2>
+</section>
+<section id="methods">
+<h2>Methods<a class="headerlink" href="#methods" title="Permalink to this heading">¶</a></h2>
 <blockquote>
-<div><dl class="method">
-<dt id="new_plotaxes">
-<code class="sig-name descname">new_plotaxes</code><span class="sig-paren">(</span><em class="sig-param">name=None</em><span class="sig-paren">)</span><a class="headerlink" href="#new_plotaxes" title="Permalink to this definition">¶</a></dt>
+<div><dl class="py method">
+<dt class="sig sig-object py" id="new_plotaxes">
+<span class="sig-name descname"><span class="pre">new_plotaxes</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">name</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#new_plotaxes" title="Permalink to this definition">¶</a></dt>
 <dd><p>Create and return a new object of class <a class="reference internal" href="ClawPlotAxes.html#clawplotaxes"><span class="std std-ref">ClawPlotAxes</span></a> associated with this
 ClawPlotFigure object.  A single figure may have several axes on it.</p>
 <p>The name specified is used as a dictionary key.  If None is provided,
 one is generated automatically of the form AXES1, etc.</p>
 </dd></dl>
 
-<dl class="method">
-<dt id="gethandle">
-<code class="sig-name descname">gethandle</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="headerlink" href="#gethandle" title="Permalink to this definition">¶</a></dt>
+<dl class="py method">
+<dt class="sig sig-object py" id="gethandle">
+<span class="sig-name descname"><span class="pre">gethandle</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="headerlink" href="#gethandle" title="Permalink to this definition">¶</a></dt>
 <dd><p>Returns the handle for this figure.</p>
 </dd></dl>
 
 </div></blockquote>
-</div>
-</div>
+</section>
+</section>
 
 
+            <div class="clearer"></div>
           </div>
         </div>
       </div>
@@ -168,15 +187,22 @@ <h2>Methods<a class="headerlink" href="#methods" title="Permalink to this headli
 </a>
 <h2>Version dev</h2>
 </p>
-  <h3><a href="contents.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="contents.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">ClawPlotFigure</a><ul>
+<li><a class="reference internal" href="#ClawPlotFigure"><code class="docutils literal notranslate"><span class="pre">ClawPlotFigure</span></code></a></li>
 <li><a class="reference internal" href="#attributes">Attributes</a></li>
-<li><a class="reference internal" href="#methods">Methods</a></li>
+<li><a class="reference internal" href="#methods">Methods</a><ul>
+<li><a class="reference internal" href="#new_plotaxes"><code class="docutils literal notranslate"><span class="pre">new_plotaxes()</span></code></a></li>
+<li><a class="reference internal" href="#gethandle"><code class="docutils literal notranslate"><span class="pre">gethandle()</span></code></a></li>
 </ul>
 </li>
 </ul>
-<h3>Related Topics</h3>
+</li>
+</ul>
+
+  </div><h3>Related Topics</h3>
 <ul>
   <li><a href="contents.html">Documentation overview</a><ul>
   <li><a href="plotting.html">Plotting with Visclaw</a><ul>
@@ -211,25 +237,19 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
 </div>
-<script>$('#searchbox').show(0);</script>
+<script>document.getElementById('searchbox').style.display = "block"</script>
 <h4>Latest Version</h4>
 <ul>
   <li><a href="ClawPlotFigure.html">dev</a></li>
   <li><a href="../v5.9.x/ClawPlotFigure.html">v5.9.x</a></li>
 </ul>
 <h4>Older Versions</h4>
 <ul>
-  <li><a href="../v5.1.x/ClawPlotFigure.html">v5.1.x</a></li>
-  <li><a href="../v5.2.x/ClawPlotFigure.html">v5.2.x</a></li>
-  <li><a href="../v5.3.x/ClawPlotFigure.html">v5.3.x</a></li>
-  <li><a href="../v5.4.x/ClawPlotFigure.html">v5.4.x</a></li>
-  <li><a href="../v5.5.x/ClawPlotFigure.html">v5.5.x</a></li>
-  <li><a href="../v5.6.x/ClawPlotFigure.html">v5.6.x</a></li>
   <li><a href="../v5.7.x/ClawPlotFigure.html">v5.7.x</a></li>
   <li><a href="../v5.8.x/ClawPlotFigure.html">v5.8.x</a></li>
 </ul>