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Makefile
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.PHONY: clean clean-test clean-pyc clean-build docs help
.DEFAULT_GOAL := help
define BROWSER_PYSCRIPT
import os, webbrowser, sys
try:
from urllib import pathname2url
except:
from urllib.request import pathname2url
webbrowser.open("file://" + pathname2url(os.path.abspath(sys.argv[1])))
endef
export BROWSER_PYSCRIPT
define PRINT_HELP_PYSCRIPT
import re, sys
for line in sys.stdin:
match = re.match(r'^([a-zA-Z_-]+):.*?## (.*)$$', line)
if match:
target, help = match.groups()
print("%-20s %s" % (target, help))
endef
export PRINT_HELP_PYSCRIPT
BROWSER := python -c "$$BROWSER_PYSCRIPT"
help:
@python -c "$$PRINT_HELP_PYSCRIPT" < $(MAKEFILE_LIST)
clean: clean-build clean-pyc clean-test clean-docs ## remove all build, test, coverage and Python artifacts
clean-build: ## remove build artifacts
rm -fr build/
rm -fr dist/
rm -fr .eggs/
find . -name '*.egg-info' -exec rm -fr {} +
find . -name '*.egg' -exec rm -f {} +
clean-docs:
rm -f docs/anamod.rst
rm -f docs/modules.rst
$(MAKE) -C docs clean
clean-pyc: ## remove Python file artifacts
find . -name '*.pyc' -exec rm -f {} +
find . -name '*.pyo' -exec rm -f {} +
find . -name '*~' -exec rm -f {} +
find . -name '__pycache__' -exec rm -fr {} +
clean-test: ## remove test and coverage artifacts
rm -fr .tox/
rm -f .coverage
rm -fr htmlcov/
rm -fr .pytest_cache
rm -fr prof/
lint: ## check style with pylint/flake8
flake8 anamod tests
pylint anamod tests
doc8 docs README.rst
test: ## run tests quickly with the default Python
pytest -rA tests
test-update-golds: ## run tests and update gold files (two passes required for hierarchical analysis tests)
-pytest -rA tests --force-regen
-pytest -rA tests --force-regen
-python -m tests.gen_condor_tests -type hierarchical -overwrite_golds 1
python -m tests.gen_condor_tests -type temporal -overwrite_golds 1
test-condor: ## run tests in parallel over condor with non-shared filesystem
pytest -rA tests/condor_tests/ -n 20
test-condor-sharedfs: ## run tests in parallel over condor with shared filesystem; need to specify shared working directory
pytest -rA tests/condor_tests/ -n 20 --shared-fs --basetemp=condor_test_runs
test-all: ## run tests on every Python version with tox
tox
coverage: ## check code coverage quickly with the default Python
pytest --cov=anamod tests
coverage report -m
coverage html
$(BROWSER) htmlcov/index.html
profile: # profile the code
pytest --profile-svg tests
open prof/combined.svg
docs: clean-docs ## generate Sphinx HTML documentation, including API docs
# sphinx-apidoc -o docs/ anamod
$(MAKE) -C docs html
$(BROWSER) docs/_build/html/index.html
servedocs: docs ## compile the docs watching for changes
watchmedo shell-command -p '*.rst' -c '$(MAKE) -C docs html' -R -D .
release: dist ## package and upload a release
twine upload dist/*
dist: clean ## builds source and wheel package
python setup.py sdist
python setup.py bdist_wheel
ls -l dist
install: clean ## install the package to the active Python's site-packages
python setup.py install