The following use cases illustrate applications of CoMorMent containers:
- gwas_demo.md describes how to run a demo GWAS analysis with
plink2
andregenie
following the CoMorMent specifications. - gwas_real.md illustrates usage of gwas.py analysis on MoBa height and depression phenotypes
- meta_simu.md describe use cases related to meta-analysis
- bolt-lmm_demo.md describes how to run bolt-lmm
- scripts/pgs/LDpred2/README.md describes how to run PRS analyses using LDpred2