Release notes
340273e - Doksuri2305, 2024-08-20 13:31:46 +0800 : Update lineage_notes.txt
708a9e9 - Doksuri2305, 2024-08-21 14:43:14 +0800 : Update lineage_notes.txt
f5a0757 - aviczhl2, 2024-08-28 14:54:51 +0800 : add_1_from_main_79_from_secondary
01f3179 - Cornelius Roemer, 2024-09-20 17:34:27 +0200 : fix: Add back some XDV.1 designations (they had reduced to 0)
fba73e7 - Cornelius Roemer, 2024-09-28 19:20:43 +0200 : Designate XEH from #2790
1a23ef0 - Cornelius Roemer, 2024-09-28 19:37:55 +0200 : Designate XEJ
ba3711a - Cornelius Roemer, 2024-09-28 20:05:58 +0200 : Designate XEC.2, XEK
05ebc2e - Cornelius Roemer, 2024-10-19 20:18:37 +0200 : Designate some LF.7 sublineages
160157e - Cornelius Roemer, 2024-10-19 20:42:07 +0200 : Designate LF.7.4, S:T961M
3365724 - Cornelius Roemer, 2024-10-20 14:22:31 +0200 : Designate some JN.1.49 sublineages
0c2adb7 - Cornelius Roemer, 2024-10-20 18:46:20 +0200 : Designate XDV.1.5.1 and NB.1 (XDV.1.5.1.1)
c542eb9 - Cornelius Roemer, 2024-10-20 19:34:30 +0200 : Designate KS.1.1.1 (C2091T, A1674C, spread by Usher due to masking of C2091T) and KS.1.1.2 (ORF1a:L2146F, C19716T, main branch of KS.1.1)
d247018 - Cornelius Roemer, 2024-10-20 19:47:23 +0200 : Designate XEL (Recombinant lineage of KS.1.1.2, JN.1 (breakpoint: 22929-24820), from #2751)
0b02249 - Cornelius Roemer, 2024-10-20 19:55:26 +0200 : Designate NC.1 (KS.1.1.1.1, S:R190S)
bb7b4ed - Cornelius Roemer, 2024-10-20 20:13:00 +0200 : Designate LF.8.1.1 sublineages (ND)
efe8e07 - Cornelius Roemer, 2024-10-20 20:24:26 +0200 : Designate MC.10.1 (435S) and KP.2.2.1 (T22N)
a3d38ca - Cornelius Roemer, 2024-10-20 20:31:54 +0200 : Designate KP.2.25 and sublineages
ffff0c8 - Cornelius Roemer, 2024-10-20 22:18:05 +0200 : Designate some MD.3.1 sublineages
c309913 - Cornelius Roemer, 2024-10-20 22:23:42 +0200 : Add some MD.1 sublineages
81c3b2d - Cornelius Roemer, 2024-10-21 13:29:23 +0200 : Some KP sublineages
87730bf - Federico Gueli, 2024-10-21 15:15:10 +0200 : Update lineage_notes.txt (#2809)
d2a0c5b - Federico Gueli, 2024-10-21 15:16:20 +0200 : Update lineage_notes.txt (#2808)
623a566 - dependabot[bot], 2024-10-21 15:17:17 +0200 : Bump actions/download-artifact from 3 to 4.1.7 in /.github/workflows (#2760)
e67b451 - Yat-sing Ng, 2024-10-21 23:28:22 +0800 : Update lineage_notes.txt
986687e - Cornelius Roemer, 2024-10-22 20:43:45 +0200 : Designate KP.2.27 (S:T572I)
f04d7b5 - Cornelius Roemer, 2024-10-22 21:00:23 +0200 : Designate KP.2.2.2, KP.2.38, XEM
556f3a1 - Cornelius Roemer, 2024-10-22 22:53:24 +0200 : Designation of MC.18 (S:T259R was mistake, already existed as MC.14)
6637343 - Cornelius Roemer, 2024-10-23 00:57:09 +0200 : Designate KP.1.1.6, NE.1, XEN
39acabc - Federico Gueli, 2024-10-23 10:34:59 +0200 : KP.1.1.6 added S:N185del, S:F186I as defining
eabf495 - Cornelius Roemer, 2024-10-24 17:31:20 +0200 : Designate NF.1
4744b7a - Cornelius Roemer, 2024-10-24 19:44:48 +0200 : KP.2.2.1 sublineages (NH) and KP.2.3.9 (NG)
608685e - Cornelius Roemer, 2024-10-25 17:41:03 +0200 : Designate JN.1.11.2, NJ.1
b2f9b67 - Cornelius Roemer, 2024-10-25 17:51:42 +0200 : Designate KP.2.3.10 (478T rev) and NK.1 (S:R190S)
9db833c - Cornelius Roemer, 2024-10-25 18:18:45 +0200 : Designate LP.5-7
d393047 - Cornelius Roemer, 2024-10-25 18:45:47 +0200 : Designate NL.1 (LB.1.3.1.1), MU.2(.1), KP.2.3.11
1620c06 - Cornelius Roemer, 2024-10-25 18:56:40 +0200 : Designate KP.3.7
73becf7 - Cornelius Roemer, 2024-10-27 02:11:28 +0100 : Designate KR.1.4, LZ.2.1.1/2
5021628 - Cornelius Roemer, 2024-10-27 04:52:47 +0100 : Designate KP.2.3.12 (#2765) and NM.1 (KP.2.3.4.1)
ef380be - Cornelius Roemer, 2024-10-27 05:01:32 +0100 : Designate LP.8 (S:H445R, S:Q493E, S:F186L, ORF3a:P178L, Singapore/Philippines, from #2811)
528407d - Cornelius Roemer, 2024-10-27 05:07:17 +0100 : Designate LF.7.1.2
e945668 - Cornelius Roemer, 2024-10-27 05:19:22 +0100 : Designate KP.4.2.3/4
cdba04f - Cornelius Roemer, 2024-10-27 14:21:39 +0100 : Fix LP.7.1.2 -> LF.7.1.2
7b20f1b - Federico Gueli, 2024-10-29 22:30:49 +0100 : NL.1 Alias corrected (#2818)
9e167a0 - Angie Hinrichs, 2024-10-30 11:29:34 -0700 : Merge pull request #2741 from Memorablea/patch-4
e9c6e79 - Angie Hinrichs, 2024-10-30 11:43:53 -0700 : Merge pull request #2754 from xz-keg/master
a4d106c - Angie Hinrichs, 2024-10-30 11:47:15 -0700 : Merge pull request #2810 from Over-There-Is/patch-10
a66cfe4 - Angie Hinrichs, 2024-10-30 11:50:56 -0700 : Merge pull request #2814 from FedeGueli/patch-59
b1e238c - Cornelius Roemer, 2024-11-01 10:36:05 +0100 : Designate a bunch of lineages
dd30483 - Cornelius Roemer, 2024-11-05 18:22:50 +0100 : Designate MJs and LF.10
0e2f2c4 - aviczhl2, 2024-11-08 18:49:33 +0800 : add 66 autorefs modified: automated-issue-ref.ipynb modified: autoref/milestone.txt modified: autoref/missing_refs.txt modified: lineage_notes.txt modified: automated-issue-ref.ipynb
218759a - Cornelius Roemer, 2024-11-08 14:28:09 +0100 : Designate LP.8.1 and LP.8.2
d4c311e - Cornelius Roemer, 2024-11-08 15:08:15 +0100 : Designate NL.2-7 and LF.7.1.3
0e147e5 - Angie Hinrichs, 2024-11-08 14:22:54 -0800 : Merge pull request #2824 from xz-keg/master
dd477c4 - Cornelius Roemer, 2024-11-12 19:27:50 +0100 : Designate a bunch of lineages
ad2242f - Cornelius Roemer, 2024-11-12 19:41:25 +0100 : Designating NP.1/2 and XEP
dc17e54 - Cornelius Roemer, 2024-11-12 19:48:17 +0100 : Designate some S:A435S lineages
c822601 - Cornelius Roemer, 2024-11-12 19:56:12 +0100 : Designate XDY.1 and MC.22
d235e07 - Cornelius Roemer, 2024-11-12 21:04:30 +0100 : Designate LP.10(.1), MU.3, NH.4, NQ.1
66f18f2 - Cornelius Roemer, 2024-11-13 12:06:21 +0100 : Make LP.9.1 -> LP.9 as bad quality USA/LA- sequences confused me, they all should have S:H445P
9da7b50 - Cornelius Roemer, 2024-11-13 12:16:15 +0100 : Fix KP.2.3.13 designations
36e8c56 - Cornelius Roemer, 2024-11-13 12:59:02 +0100 : Designate MG.2-3
51c2443 - Cornelius Roemer, 2024-11-14 12:57:29 +0100 : Designate MG.4