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T4.gb
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LOCUS NC_000866 168903 bp DNA linear PHG 11-OCT-2021
DEFINITION Enterobacteria phage T4, complete genome.
ACCESSION NC_000866
VERSION NC_000866.4
DBLINK BioProject: PRJNA485481
KEYWORDS RefSeq.
SOURCE Escherichia phage T4
ORGANISM Escherichia phage T4
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota;
Caudoviricetes; Straboviridae; Tevenvirinae; Tequatrovirus.
REFERENCE 1 (bases 1 to 168903)
AUTHORS Miller,E.S., Kutter,E., Mosig,G., Arisaka,F., Kunisawa,T. and
Ruger,W.
TITLE Bacteriophage T4 genome
JOURNAL Microbiol. Mol. Biol. Rev. 67 (1), 86-156 (2003)
PUBMED 12626685
REFERENCE 2 (bases 108636 to 109640)
AUTHORS Ho,C.K. and Shuman,S.
TITLE Bacteriophage T4 RNA ligase 2 (gp24.1) exemplifies a family of RNA
ligases found in all phylogenetic domains
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (20), 12709-12714 (2002)
PUBMED 12228725
REMARK Erratum:[Proc Natl Acad Sci U S A 2002 Oct 15;99(21):13961]
REFERENCE 3 (bases 80196 to 80618)
AUTHORS Shcherbakov,V., Granovsky,I., Plugina,L., Shcherbakova,T.,
Sizova,S., Pyatkov,K., Shlyapnikov,M. and Shubina,O.
TITLE Focused genetic recombination of bacteriophage t4 initiated by
double-strand breaks
JOURNAL Genetics 162 (2), 543-556 (2002)
PUBMED 12399370
REFERENCE 4 (bases 67035 to 67490)
AUTHORS Xu,W., Gauss,P., Shen,J., Dunn,C.A. and Bessman,M.J.
TITLE The gene e.1 (nudE.1) of T4 bacteriophage designates a new member
of the Nudix hydrolase superfamily active on flavin adenine
dinucleotide, adenosine 5'-triphospho-5'-adenosine, and ADP-ribose
JOURNAL J. Biol. Chem. 277 (26), 23181-23185 (2002)
PUBMED 11976345
REFERENCE 5 (bases 127234 to 127234; 128355 to 128355; 131540 to 131540)
AUTHORS Truncaite,L., Zajanckauskaite,A. and Nivinskas,R.
TITLE Identification of two middle promoters upstream DNA ligase gene 30
of bacteriophage T4
JOURNAL J. Mol. Biol. 317 (2), 179-190 (2002)
PUBMED 11902835
REFERENCE 6 (bases 15606 to 16280)
AUTHORS Belle,A., Landthaler,M. and Shub,D.A.
TITLE Intronless homing: site-specific endonuclease SegF of bacteriophage
T4 mediates localized marker exclusion analogous to homing
endonucleases of group I introns
JOURNAL Genes Dev. 16 (3), 351-362 (2002)
PUBMED 11825876
REFERENCE 7 (bases 41805 to 42113)
AUTHORS Stehr,M., Schneider,G., Aslund,F., Holmgren,A. and Lindqvist,Y.
TITLE Structural basis for the thioredoxin-like activity profile of the
glutaredoxin-like NrdH-redoxin from Escherichia coli
JOURNAL J. Biol. Chem. 276 (38), 35836-35841 (2001)
PUBMED 11441020
REFERENCE 8 (bases 59202 to 59495)
AUTHORS Ramanculov,E. and Young,R.
TITLE An ancient player unmasked: T4 rI encodes a t-specific antiholin
JOURNAL Mol. Microbiol. 41 (3), 575-583 (2001)
PUBMED 11532126
REFERENCE 9 (bases 77981 to 78118; 79085 to 79237)
AUTHORS Vaiskunaite,R., Miller,A., Davenport,L. and Mosig,G.
TITLE Two new early bacteriophage T4 genes, repEA and repEB, that are
important for DNA replication initiated from origin E
JOURNAL J. Bacteriol. 181 (22), 7115-7125 (1999)
PUBMED 10559179
REFERENCE 10 (bases 11039 to 14676)
AUTHORS Mosig,G., Colowick,N.E. and Pietz,B.C.
TITLE Several new bacteriophage T4 genes, mapped by sequencing deletion
endpoints between genes 56 (dCTPase) and dda (a DNA-dependent
ATPase-helicase) modulate transcription
JOURNAL Gene 223 (1-2), 143-155 (1998)
PUBMED 9858714
REFERENCE 11 (bases 96672 to 98504)
AUTHORS Franklin,J.L., Haseltine,D., Davenport,L. and Mosig,G.
TITLE The largest (70 kDa) product of the bacteriophage T4 DNA terminase
gene 17 binds to single-stranded DNA segments and digests them
towards junctions with double-stranded DNA
JOURNAL J. Mol. Biol. 277 (3), 541-557 (1998)
PUBMED 9533879
REFERENCE 12 (bases 165209 to 165349)
AUTHORS Wang,F.J. and Ripley,L.S.
TITLE The spectrum of acridine resistant mutants of bacteriophage T4
reveals cryptic effects of the tsL141 DNA polymerase allele on
spontaneous mutagenesis
JOURNAL Genetics 148 (4), 1655-1665 (1998)
PUBMED 9560385
REFERENCE 13 (bases 58763 to 59743)
AUTHORS Paddison,P., Abedon,S.T., Dressman,H.K., Gailbreath,K., Tracy,J.,
Mosser,E., Neitzel,J., Guttman,B. and Kutter,E.
TITLE The roles of the bacteriophage T4 r genes in lysis inhibition and
fine-structure genetics: a new perspective
JOURNAL Genetics 148 (4), 1539-1550 (1998)
PUBMED 9560373
REFERENCE 14 (bases 161312 to 161590)
AUTHORS Kim,B.C., Kim,K., Park,E.H. and Lim,C.J.
TITLE Nucleotide sequence and revised map location of the arn gene from
bacteriophage T4
JOURNAL Mol. Cells 7 (5), 694-696 (1997)
PUBMED 9387160
REFERENCE 15 (bases 112057 to 112674)
AUTHORS Kadyrov,F.A., Shlyapnikov,M.G. and Kryukov,V.M.
TITLE A phage T4 site-specific endonuclease, SegE, is responsible for a
non-reciprocal genetic exchange between T-even-related phages
JOURNAL FEBS Lett. 415 (1), 75-80 (1997)
PUBMED 9326373
REFERENCE 16 (bases 128402 to 128629)
AUTHORS Zajanckauskaite,A., Malys,N. and Nivinskas,R.
TITLE A rare type of overlapping genes in bacteriophage T4: gene 30.3' is
completely embedded within gene 30.3 by one position downstream
JOURNAL Gene 194 (2), 157-162 (1997)
PUBMED 9272856
REFERENCE 17 (bases 112677 to 114440)
AUTHORS Carles-Kinch,K., George,J.W. and Kreuzer,K.N.
TITLE Bacteriophage T4 UvsW protein is a helicase involved in
recombination, repair and the regulation of DNA replication origins
JOURNAL EMBO J. 16 (13), 4142-4151 (1997)
PUBMED 9233823
REFERENCE 18 (bases 96672 to 98504)
AUTHORS Franklin,J.L. and Mosig,G.
TITLE Expression of the bacteriophage T4 DNA terminase genes 16 and 17
yields multiple proteins
JOURNAL Gene 177 (1-2), 179-189 (1996)
PUBMED 8921865
REFERENCE 19 (bases 20371 to 20553)
AUTHORS Kai,T., Selick,H.E. and Yonesaki,T.
TITLE Destabilization of bacteriophage T4 mRNAs by a mutation of gene
61.5
JOURNAL Genetics 144 (1), 7-14 (1996)
PUBMED 8878669
REFERENCE 20 (bases 165505 to 165585)
AUTHORS Penner,M., Morad,I., Snyder,L. and Kaufmann,G.
TITLE Phage T4-coded Stp: double-edged effector of coupled DNA and
tRNA-restriction systems
JOURNAL J. Mol. Biol. 249 (5), 857-868 (1995)
PUBMED 7791212
REFERENCE 21 (bases 118423 to 118881)
AUTHORS Bova,R., Cascino,A., Cipollaro,M., Gargano,S., Grau,O.,
Micheli,M.R., Santoro,M., Scarlato,V. and Storlazzi,A.
TITLE Bacteriophage T4 gene 28
JOURNAL DNA Seq. 5 (3), 199-201 (1995)
PUBMED 7612935
REFERENCE 22 (bases 42446 to 42916)
AUTHORS Young,P., Ohman,M. and Sjoberg,B.M.
TITLE Bacteriophage T4 gene 55.9 encodes an activity required for
anaerobic ribonucleotide reduction
JOURNAL J. Biol. Chem. 269 (45), 27815-27818 (1994)
PUBMED 7961708
REFERENCE 23 (bases 123454 to 125502)
AUTHORS Koch,T. and Ruger,W.
TITLE The ADP-ribosyltransferases (gpAlt) of bacteriophages T2, T4, and
T6: sequencing of the genes and comparison of their products
JOURNAL Virology 203 (2), 294-298 (1994)
PUBMED 8053153
REFERENCE 24 (bases 165583 to 167943)
AUTHORS Bouet,J.Y., Woszczyk,J., Repoila,F., Francois,V., Louarn,J.M. and
Krisch,H.M.
TITLE Direct PCR sequencing of the ndd gene of bacteriophage T4:
identification of a product involved in bacterial nucleoid
disruption
JOURNAL Gene 141 (1), 9-16 (1994)
PUBMED 8163181
REFERENCE 25 (bases 18966 to 20553)
AUTHORS Selick,H.E., Stormo,G.D., Dyson,R.L. and Alberts,B.M.
TITLE Analysis of five presumptive protein-coding sequences clustered
between the primosome genes, 41 and 61, of bacteriophages T4, T2,
and T6
JOURNAL J. Virol. 67 (4), 2305-2316 (1993)
PUBMED 8383243
REFERENCE 26 (bases 160878 to 161150)
AUTHORS Orsini,G., Ouhammouch,M., Le Caer,J.P. and Brody,E.N.
TITLE The asiA gene of bacteriophage T4 codes for the anti-sigma 70
protein
JOURNAL J. Bacteriol. 175 (1), 85-93 (1993)
PUBMED 8416914
REFERENCE 27 (bases 9410 to 11037)
AUTHORS Hacker,K.J. and Alberts,B.M.
TITLE Overexpression, purification, sequence analysis, and
characterization of the T4 bacteriophage dda DNA helicase
JOURNAL J. Biol. Chem. 267 (29), 20674-20681 (1992)
PUBMED 1328208
REFERENCE 28 (bases 5842 to 7650)
AUTHORS Sanson,B. and Uzan,M.
TITLE Sequence and characterization of the bacteriophage T4 comC alpha
gene product, a possible transcription antitermination factor
JOURNAL J. Bacteriol. 174 (20), 6539-6547 (1992)
PUBMED 1400206
REFERENCE 29 (bases 23570 to 24235)
AUTHORS Sharma,M., Ellis,R.L. and Hinton,D.M.
TITLE Identification of a family of bacteriophage T4 genes encoding
proteins similar to those present in group I introns of fungi and
phage
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 89 (14), 6658-6662 (1992)
PUBMED 1631169
REFERENCE 30 (bases 130785 to 131033)
AUTHORS Raudonikiene,A. and Nivinskas,R.
TITLE Gene rIII is the nearest downstream neighbour of bacteriophage T4
gene 31
JOURNAL Gene 114 (1), 85-90 (1992)
PUBMED 1587487
REFERENCE 31 (bases 127205 to 130540)
AUTHORS Nivinskas,R., Zajanckauskaite,A., Raudonikiene,A. and Viteniene,I.
TITLE The nucleotide sequence between genes 31 and 30 of bacteriophage T4
JOURNAL DNA Seq. 2 (6), 405-409 (1992)
PUBMED 1446076
REFERENCE 32 (bases 114496 to 117228)
AUTHORS Gruidl,M.E., Chen,T.C., Gargano,S., Storlazzi,A., Cascino,A. and
Mosig,G.
TITLE Two bacteriophage T4 base plate genes (25 and 26) and the DNA
repair gene uvsY belong to spatially and temporally overlapping
transcription units
JOURNAL Virology 184 (1), 359-369 (1991)
PUBMED 1871975
REFERENCE 33 (bases 81081 to 87155)
AUTHORS Efimov,V.P., Prilipov,A.G. and Mesyanzhinov,V.V.
TITLE Nucleotide sequences of bacteriophage T4 genes 6, 7 and 8
JOURNAL Nucleic Acids Res. 18 (17), 5313 (1990)
PUBMED 2402473
REFERENCE 34 (bases 160878 to 163879)
AUTHORS Uzan,M., Brody,E. and Favre,R.
TITLE Nucleotide sequence and control of transcription of the
bacteriophage T4 motA regulatory gene
JOURNAL Mol. Microbiol. 4 (9), 1487-1496 (1990)
PUBMED 2287273
REFERENCE 35 (bases 108636 to 112674)
AUTHORS Kaliman,A.V., Khasanova,M.A., Kryukov,V.M., Tanyashin,V.I. and
Bayev,A.A.
TITLE The nucleotide sequence of the region of bacteriophage T4
inh(lip)-hoc genes
JOURNAL Nucleic Acids Res. 18 (14), 4277 (1990)
PUBMED 2377482
REFERENCE 36 (bases 96194 to 98504)
AUTHORS Powell,D., Franklin,J., Arisaka,F. and Mosig,G.
TITLE Bacteriophage T4 DNA packaging genes 16 and 17
JOURNAL Nucleic Acids Res. 18 (13), 4005 (1990)
PUBMED 2374730
REFERENCE 37 (bases 12 to 2403)
AUTHORS Daegelen,P. and Brody,E.
TITLE The rIIA gene of bacteriophage T4. I. Its DNA sequence and
discovery of a new open reading frame between genes 60 and rIIA
JOURNAL Genetics 125 (2), 237-248 (1990)
PUBMED 2379817
REFERENCE 38 (bases 117228 to 118403)
AUTHORS Bova,R., Cascino,A., Cipollaro,M., Grau,O., Micheli,M.R.,
Santoro,M., Storlazzi,A., Scarlato,V. and Gargano,S.
TITLE Bacteriophage T4 gene 27
JOURNAL Nucleic Acids Res. 18 (10), 3046 (1990)
PUBMED 2349100
REFERENCE 39 (bases 11039 to 15232)
AUTHORS Frazier,M.W. and Mosig,G.
TITLE The bacteriophage T4 gene mrh whose product inhibits late T4 gene
expression in an Escherichia coli rpoH (sigma 32) mutant
JOURNAL Gene 88 (1), 7-14 (1990)
PUBMED 1692800
REFERENCE 40 (bases 131573 to 133261)
AUTHORS Maley,G.F., Duceman,B.W., Wang,A.M., Martinez,J. and Maley,F.
TITLE Cloning, sequence analysis, and expression of the bacteriophage T4
cd gene
JOURNAL J. Biol. Chem. 265 (1), 47-51 (1990)
PUBMED 2136740
REFERENCE 41 (bases 104117 to 104926)
AUTHORS Marusich,E.I. and Mesyanzhinov,V.V.
TITLE Nucleotide and deduced amino acid sequences of bacteriophage T4
gene 22
JOURNAL Nucleic Acids Res. 17 (21), 8865 (1989)
PUBMED 2587226
REFERENCE 42 (bases 77959 to 81072)
AUTHORS Mosig,G., Lin,G.W., Franklin,J. and Fan,W.H.
TITLE Functional relationships and structural determinants of two
bacteriophage T4 lysozymes: a soluble (gene e) and a
baseplate-associated (gene 5) protein
JOURNAL New Biol. 1 (2), 171-179 (1989)
PUBMED 2488704
REFERENCE 43 (bases 101207 to 102781)
AUTHORS Marusich,E.I. and Mesyanzhinov,V.V.
TITLE Nucleotide and deduced amino acid sequences of bacteriophage T4
gene 20
JOURNAL Nucleic Acids Res. 17 (18), 7514 (1989)
PUBMED 2798102
REFERENCE 44 (bases 148543 to 150732)
AUTHORS Hahn,S. and Ruger,W.
TITLE Organization of the bacteriophage T4 genome between map positions
150.745 and 145.824
JOURNAL Nucleic Acids Res. 17 (16), 6729 (1989)
PUBMED 2674900
REFERENCE 45 (bases 22049 to 22393)
AUTHORS Hinton,D.M.
TITLE Altered expression of the bacteriophage T4 gene 41
(primase-helicase) in an Escherichia coli rho mutant
JOURNAL J. Biol. Chem. 264 (24), 14440-14446 (1989)
PUBMED 2668290
REFERENCE 46 (bases 125560 to 125748)
AUTHORS Hilse,D., Koch,T. and Ruger,W.
TITLE Nucleotide sequence of the alt gene of bacteriophage T4
JOURNAL Nucleic Acids Res. 17 (16), 6731 (1989)
PUBMED 2506526
REFERENCE 47 (bases 116479 to 117228)
AUTHORS Scarlato,V., Storlazzi,A., Gargano,S. and Cascino,A.
TITLE Bacteriophage T4 late gene expression: overlapping promoters direct
divergent transcription of the base plate gene cluster
JOURNAL Virology 171 (2), 475-483 (1989)
PUBMED 2763463
REFERENCE 48 (bases 26373 to 26624)
AUTHORS Lu,M.J. and Henning,U.
TITLE The immunity (imm) gene of Escherichia coli bacteriophage T4
JOURNAL J. Virol. 63 (8), 3472-3478 (1989)
PUBMED 2746737
REFERENCE 49 (bases 75424 to 77975)
AUTHORS Koch,T., Lamm,N. and Ruger,W.
TITLE Sequencing, cloning and overexpression of genes of bacteriophage T4
between map positions 74.325 and 77.184
JOURNAL Nucleic Acids Res. 17 (11), 4392 (1989)
PUBMED 2740234
REFERENCE 50 (bases 93624 to 96185)
AUTHORS Selivanov,N.A., Prilipov,A.G. and Mesyanzhinov,V.V.
TITLE Nucleotide sequences of bacteriophage T4 genes 13, 14 and 15
JOURNAL Nucleic Acids Res. 17 (9), 3583 (1989)
PUBMED 2657662
REFERENCE 51 (bases 87219 to 90615)
AUTHORS Prilipov,A.G., Selivanov,N.A., Efimov,V.P., Marusich,E.I. and
Mesyanzhinov,V.V.
TITLE Nucleotide sequences of bacteriophage T4 genes 9, 10 and 11
JOURNAL Nucleic Acids Res. 17 (8), 3303 (1989)
PUBMED 2726468
REFERENCE 52 (bases 131181 to 131516)
AUTHORS Nivinskas,R. and Black,L.W.
TITLE Cloning, sequence, and expression of the temperature-dependent
phage T4 capsid assembly gene 31
JOURNAL Gene 73 (1), 251-257 (1988)
PUBMED 3072258
REFERENCE 53 (bases 92129 to 93592)
AUTHORS Prilipov,A.G., Selivanov,N.A., Nikolaeva,L.I. and Mesyanzhinov,V.V.
TITLE Nucleotide and deduced amino acid sequence of bacteriophage T4 gene
wac
JOURNAL Nucleic Acids Res. 16 (21), 10361 (1988)
PUBMED 3194206
REFERENCE 54 (bases 139991 to 143214)
AUTHORS Tseng,M.J., Hilfinger,J.M., Walsh,A. and Greenberg,G.R.
TITLE Total sequence, flanking regions, and transcripts of bacteriophage
T4 nrdA gene, coding for alpha chain of ribonucleoside diphosphate
reductase
JOURNAL J. Biol. Chem. 263 (31), 16242-16251 (1988)
PUBMED 2846540
REFERENCE 55 (bases 27197 to 29893)
AUTHORS Spicer,E.K., Rush,J., Fung,C., Reha-Krantz,L.J., Karam,J.D. and
Konigsberg,W.H.
TITLE Primary structure of T4 DNA polymerase. Evolutionary relatedness to
eucaryotic and other procaryotic DNA polymerases
JOURNAL J. Biol. Chem. 263 (16), 7478-7486 (1988)
PUBMED 3286635
REFERENCE 56 (bases 118878 to 122715)
AUTHORS Ishimoto,L.K., Ishimoto,K.S., Cascino,A., Cipollaro,M. and
Eiserling,F.A.
TITLE The structure of three bacteriophage T4 genes required for
tail-tube assembly
JOURNAL Virology 164 (1), 81-90 (1988)
PUBMED 3363870
REFERENCE 57 (bases 98536 to 100515)
AUTHORS Arisaka,F., Nakako,T., Takahashi,H. and Ishii,S.
TITLE Nucleotide sequence of the tail sheath gene of bacteriophage T4 and
amino acid sequence of its product
JOURNAL J. Virol. 62 (4), 1186-1193 (1988)
PUBMED 2964531
REFERENCE 58 (bases 90549 to 92132)
AUTHORS Selivanov,N.A., Prilipov,A.G. and Mesyanzhinov,V.V.
TITLE Nucleotide and deduced amino acid sequence of bacteriophage T4 gene
12
JOURNAL Nucleic Acids Res. 16 (5), 2334 (1988)
PUBMED 3357780
REFERENCE 59 (bases 25479 to 27193)
AUTHORS Lamm,N., Wang,Y., Mathews,C.K. and Ruger,W.
TITLE Deoxycytidylate hydroxymethylase gene of bacteriophage T4.
Nucleotide sequence determination and over-expression of the gene
JOURNAL Eur. J. Biochem. 172 (3), 553-563 (1988)
PUBMED 3350013
REFERENCE 60 (bases 100632 to 101123)
AUTHORS Arisaka,F., Ishimoto,L., Kassavetis,G., Kumazaki,T. and Ishii,S.
TITLE Nucleotide sequence of the tail tube structural gene of
bacteriophage T4
JOURNAL J. Virol. 62 (3), 882-886 (1988)
PUBMED 2963141
REFERENCE 61 (bases 2458 to 3367)
AUTHORS Huang,W.M., Ao,S.Z., Casjens,S., Orlandi,R., Zeikus,R., Weiss,R.,
Winge,D. and Fang,M.
TITLE A persistent untranslated sequence within bacteriophage T4 DNA
topoisomerase gene 60
JOURNAL Science 239 (4843), 1005-1012 (1988)
PUBMED 2830666
REFERENCE 62 (bases 160221 to 160877)
AUTHORS Montag,D., Degen,M. and Henning,U.
TITLE Nucleotide sequence of gene t (lysis gene) of the E. coli phage T4
JOURNAL Nucleic Acids Res. 15 (16), 6736 (1987)
PUBMED 3628006
REFERENCE 63 (bases 159649 to 160200)
AUTHORS Montag,D., Riede,I., Eschbach,M.L., Degen,M. and Henning,U.
TITLE Receptor-recognizing proteins of T-even type bacteriophages.
Constant and hypervariable regions and an unusual case of evolution
JOURNAL J. Mol. Biol. 196 (1), 165-174 (1987)
PUBMED 2958637
REFERENCE 64 (bases 40193 to 48403)
AUTHORS Tomaschewski,J. and Ruger,W.
TITLE Nucleotide sequence and primary structures of gene products coded
for by the T4 genome between map positions 48.266 kb and 39.166 kb
JOURNAL Nucleic Acids Res. 15 (8), 3632-3633 (1987)
PUBMED 3575111
REFERENCE 65 (bases 33058 to 33293)
AUTHORS Hsu,T., Wei,R.X., Dawson,M. and Karam,J.D.
TITLE Identification of two new bacteriophage T4 genes that may have
roles in transcription and DNA replication
JOURNAL J. Virol. 61 (2), 366-374 (1987)
PUBMED 3543399
REFERENCE 66 (bases 8225 to 9150)
AUTHORS Gauss,P., Gayle,M., Winter,R.B. and Gold,L.
TITLE The bacteriophage T4 dexA gene: sequence and analysis of a gene
conditionally required for DNA replication
JOURNAL Mol. Gen. Genet. 206 (1), 24-34 (1987)
PUBMED 3553862
REFERENCE 67 (bases 139716 to 139967)
AUTHORS Chu,F.K., Maley,G.F., Wang,A.M. and Maley,F.
TITLE Localization of the T4 phage ribonucleotide reductase B1 subunit
gene and the nucleotide sequence of its upstream and 5' coding
regions
JOURNAL Gene 57 (1), 143-148 (1987)
PUBMED 3322944
REMARK Erratum:[Gene 1988 May 30;65(2):337]
REFERENCE 68 (bases 59508 to 66503)
AUTHORS Valerie,K., Stevens,J., Lynch,M., Henderson,E.E. and de Riel,J.K.
TITLE Nucleotide sequence and analysis of the 58.3 to 65.5-kb early
region of bacteriophage T4
JOURNAL Nucleic Acids Res. 14 (21), 8637-8654 (1986)
PUBMED 3024113
REFERENCE 69 (bases 3778 to 5328)
AUTHORS Huang,W.M.
TITLE Nucleotide sequence of a type II DNA topoisomerase gene.
Bacteriophage T4 gene 39
JOURNAL Nucleic Acids Res. 14 (19), 7751-7765 (1986)
PUBMED 3022233
REFERENCE 70 (bases 163876 to 165343)
AUTHORS Huang,W.M.
TITLE The 52-protein subunit of T4 DNA topoisomerase is homologous to the
gyrA-protein of gyrase
JOURNAL Nucleic Acids Res. 14 (18), 7379-7390 (1986)
PUBMED 3020513
REFERENCE 71 (bases 137517 to 139719)
AUTHORS Sjoberg,B.M., Hahne,S., Mathews,C.Z., Mathews,C.K., Rand,K.N. and
Gait,M.J.
TITLE The bacteriophage T4 gene for the small subunit of ribonucleotide
reductase contains an intron
JOURNAL EMBO J. 5 (8), 2031-2036 (1986)
PUBMED 3530746
REFERENCE 72 (bases 143235 to 145112)
AUTHORS Chu,F.K., Maley,G.F., West,D.K., Belfort,M. and Maley,F.
TITLE Characterization of the intron in the phage T4 thymidylate synthase
gene and evidence for its self-excision from the primary transcript
JOURNAL Cell 45 (2), 157-166 (1986)
PUBMED 3698096
REFERENCE 73 (bases 103448 to 104086)
AUTHORS Keller,B. and Bickle,T.A.
TITLE The nucleotide sequence of gene 21 of bacteriophage T4 coding for
the prohead protease
JOURNAL Gene 49 (2), 245-251 (1986)
PUBMED 3552886
REFERENCE 74 (bases 24400 to 25455)
AUTHORS Tomaschewski,J., Gram,H., Crabb,J.W. and Ruger,W.
TITLE T4-induced alpha- and beta-glucosyltransferase: cloning of the
genes and a comparison of their products based on sequencing data
JOURNAL Nucleic Acids Res. 13 (21), 7551-7568 (1985)
PUBMED 2999696
REFERENCE 75 (bases 22386 to 23561)
AUTHORS Fujisawa,H., Yonesaki,T. and Minagawa,T.
TITLE Sequence of the T4 recombination gene, uvsX, and its comparison
with that of the recA gene of Escherichia coli
JOURNAL Nucleic Acids Res. 13 (20), 7473-7481 (1985)
PUBMED 2932679
REFERENCE 76 (bases 71253 to 75403)
AUTHORS Broida,J. and Abelson,J.
TITLE Sequence organization and control of transcription in the
bacteriophage T4 tRNA region
JOURNAL J. Mol. Biol. 185 (3), 545-563 (1985)
PUBMED 4057254
REFERENCE 77 (bases 133334 to 135781)
AUTHORS Midgley,C.A. and Murray,N.E.
TITLE T4 polynucleotide kinase; cloning of the gene (pseT) and
amplification of its product
JOURNAL EMBO J. 4 (10), 2695-2703 (1985)
PUBMED 2996886
REFERENCE 78 (bases 33302 to 40181)
AUTHORS Gram,H. and Ruger,W.
TITLE Genes 55, alpha gt, 47 and 46 of bacteriophage T4: the genomic
organization as deduced by sequence analysis
JOURNAL EMBO J. 4 (1), 257-264 (1985)
PUBMED 4018026
REFERENCE 79 (bases 104945 to 106510)
AUTHORS Parker,M.L., Christensen,A.C., Boosman,A., Stockard,J., Young,E.T.
and Doermann,A.H.
TITLE Nucleotide sequence of bacteriophage T4 gene 23 and the amino acid
sequence of its product
JOURNAL J. Mol. Biol. 180 (3), 399-416 (1984)
PUBMED 6335532
REFERENCE 80 (bases 15331 to 16800)
AUTHORS Macdonald,P.M. and Mosig,G.
TITLE Regulation of a new bacteriophage T4 gene, 69, that spans an origin
of DNA replication
JOURNAL EMBO J. 3 (12), 2863-2871 (1984)
PUBMED 6098451
REFERENCE 81 (bases 103023 to 103448)
AUTHORS Keller,B., Sengstag,C., Kellenberger,E. and Bickle,T.A.
TITLE Gene 68, a new bacteriophage T4 gene which codes for the 17K
prohead core protein is involved in head size determination
JOURNAL J. Mol. Biol. 179 (3), 415-430 (1984)
PUBMED 6512858
REFERENCE 82 (bases 135772 to 136275)
AUTHORS Kutter,E., Drivdahl,R. and Rand,K.
TITLE Identification and characterization of the alc gene product of
bacteriophage T4
JOURNAL Genetics 108 (2), 291-304 (1984)
PUBMED 6389256
REFERENCE 83 (bases 29972 to 30340)
AUTHORS Trojanowska,M., Miller,E.S., Karam,J., Stormo,G. and Gold,L.
TITLE The bacteriophage T4 regA gene: primary sequence of a translational
repressor
JOURNAL Nucleic Acids Res. 12 (15), 5979-5993 (1984)
PUBMED 6473098
REFERENCE 84 (bases 145109 to 146004)
AUTHORS Purohit,S. and Mathews,C.K.
TITLE Nucleotide sequence reveals overlap between T4 phage genes encoding
dihydrofolate reductase and thymidylate synthase
JOURNAL J. Biol. Chem. 259 (10), 6261-6266 (1984)
PUBMED 6327673
REFERENCE 85 (bases 136340 to 137464)
AUTHORS Rand,K.N. and Gait,M.J.
TITLE Sequence and cloning of bacteriophage T4 gene 63 encoding RNA
ligase and tail fibre attachment activities
JOURNAL EMBO J. 3 (2), 397-402 (1984)
PUBMED 6370680
REFERENCE 86 (bases 125745 to 127208)
AUTHORS Armstrong,J., Brown,R.S. and Tsugita,A.
TITLE Primary structure and genetic organization of phage T4 DNA ligase
JOURNAL Nucleic Acids Res. 11 (20), 7145-7156 (1983)
PUBMED 6314278
REFERENCE 87 (bases 66503 to 66997)
AUTHORS Owen,J.E., Schultz,D.W., Taylor,A. and Smith,G.R.
TITLE Nucleotide sequence of the lysozyme gene of bacteriophage T4.
Analysis of mutations involving repeated sequences
JOURNAL J. Mol. Biol. 165 (2), 229-248 (1983)
PUBMED 6302287
REFERENCE 88 (bases 29446 to 33068)
AUTHORS Spicer,E.K. and Konigsberg,W.H.
TITLE Organization and Structure of Four T4 Genes Coding for DNA
Replication Proteins
JOURNAL (in) Mathews,C.K., Kutter,E.M., Mosig,G. and Berget,P.B. (Eds.);
BACTERIOPHAGE T4: 291-301;
American Society for Microbiology, Washington, DC (1983)
REFERENCE 89 (bases 102781 to 103023)
AUTHORS Volker,T.A., Gafner,J., Bickle,T.A. and Showe,M.K.
TITLE Gene 67, a new, essential bacteriophage T4 head gene codes for a
prehead core component, PIP. I. Genetic mapping and DNA sequence
JOURNAL J. Mol. Biol. 161 (4), 479-489 (1982)
PUBMED 7154087
REFERENCE 90 (bases 146948 to 148541)
AUTHORS Krisch,H.M. and Allet,B.
TITLE Nucleotide sequences involved in bacteriophage T4 gene 32
translational self-regulation
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 79 (16), 4937-4941 (1982)
PUBMED 6289325
REFERENCE 91 (bases 155868 to 159622)
AUTHORS Oliver,D.B. and Crowther,R.A.
TITLE DNA sequence of the tail fibre genes 36 and 37 of bacteriophage T4
JOURNAL J. Mol. Biol. 153 (3), 545-568 (1981)
PUBMED 7338921
REFERENCE 92 (bases 167965 to 168903)
AUTHORS Pribnow,D., Sigurdson,D.C., Gold,L., Singer,B.S., Napoli,C.,
Brosius,J., Dull,T.J. and Noller,H.F.
TITLE rII cistrons of bacteriophage T4. DNA sequence around the
intercistronic divide and positions of genetic landmarks
JOURNAL J. Mol. Biol. 149 (3), 337-376 (1981)
PUBMED 6273585
REFERENCE 93 (bases 66997 to 70623)
AUTHORS Anderson,B., Zurabishvili,T., Marusich,E., Schneider,M.,
Mullins,T., Napuli,A., Mesyanzhinov,V., Neitzel,J. and Kutter,E.
TITLE Analysis of the region between lysozyme and the tRNA genes of
bacteriophage T4
JOURNAL Unpublished
REFERENCE 94 (bases 160203 to 162963)
AUTHORS Drake,J.W., Nguyen,D. and Dressman,H.
TITLE Personal Communication
JOURNAL Unpublished
REFERENCE 95 (bases 150809 to 155805)
AUTHORS Goldberg,E.B.
TITLE Personal Communication
JOURNAL Unpublished
REFERENCE 96 (bases 19758 to 20051)
AUTHORS Kai,T., Ueno,H., Otsuko,Y., Morimoto,W. and Yonesaki,T.
TITLE Gene 61.3 of bacteriophage T4 is the spackle gene
JOURNAL Unpublished
REFERENCE 97 (bases 166303 to 167053)
AUTHORS Kreuzer,K.
JOURNAL Unpublished
REFERENCE 98 (bases 1 to 168903)
AUTHORS Kutter,E., Arisaka,F., Kunisawa,T., Tsugita,A., Mosig,G.,
Mesyanzhinov,V., Ruger,W., Stidham,T. and Thomas,E.
TITLE Bacteriophage T4 genome analysis
JOURNAL Unpublished
REFERENCE 99 (bases 48403 to 59508)
AUTHORS Mzhavia,N., Djavachishvili,T., Marusich,E., Peterson,S.,
Anderson,B., Eidemiller,J., Awaya,M., Canada,W., Dimitroff,B.,
Stidham,T., Blattner,F. and Kutter,E.
TITLE The 10.7 kb 'Nonessential' region of Bacteriophage T4 between the
genes tk and nrdC: Twenty new T4 genes, generally conserved among
T-even phages
JOURNAL Unpublished
REFERENCE 100 (bases 16846 to 22040)
AUTHORS Nakanishi,M. and Alberts,B.
JOURNAL Unpublished
REFERENCE 101 (bases 77981 to 78120)
AUTHORS Vaiskunaite,R., Miller,A., Davenport,L. and Mosig,G.
TITLE Two New Early Bacteriophage T4 Genes, repEA and repEB, are
Important for DNA Replication Initiated from Origin E
JOURNAL Unpublished
REFERENCE 102 (bases 106561 to 108606)
AUTHORS Yasuda,G., Parker,M. and Doermann,G.
TITLE Personal Communication
JOURNAL Unpublished
REFERENCE 103 (bases 1 to 168903)
AUTHORS Miller,E.S., Kutter,E., Mosig,G., Arisaka,F., Kunisawa,T. and
Ruger,W.
TITLE Direct Submission
JOURNAL Submitted (20-MAR-2003) Department of Microbiology, North Carolina
State University, Box 7615, Raleigh, NC 27695, USA
REMARK Sequence update by submitter
REFERENCE 104 (bases 1 to 168903)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2000) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 105 (bases 1 to 168903)
AUTHORS Kutter,E.
TITLE Direct Submission
JOURNAL Submitted (21-JUL-2000) The Evergreen State College, Olympia, WA
98505, USA
REMARK Sequence update by submitter
REFERENCE 106 (bases 1 to 168903)
AUTHORS Kutter,E.
TITLE Direct Submission
JOURNAL Submitted (10-JUN-1999) The Evergreen State College, Olympia, WA
98505, USA
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from AF158101.
On Mar 29, 2003 this sequence version replaced NC_000866.3.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..168903
/organism="Escherichia phage T4"
/mol_type="genomic DNA"
/host="Escherichia coli"
/db_xref="taxon:2681598"
gene complement(12..2189)
/gene="rIIA"
/locus_tag="T4p001"
/db_xref="GeneID:1258593"
CDS complement(12..2189)
/gene="rIIA"
/locus_tag="T4p001"
/note="membrane integrity protector; mutants give rapid
lysis on various lysogenic strains due to effects of
specific prophage products, mistakenly interpreted as
related to lysis inhibition"
/codon_start=1
/transl_table=11
/product="rIIA protector from prophage-induced early
lysis"
/protein_id="NP_049616.1"
/db_xref="GeneID:1258593"
/translation="MIITTEKETILGNGSKSKAFSITASPKVFKILSSDLYTNKIRAV
VRELITNMIDAHALNGNPEKFIIQVPGRLDPRFVCRDFGPGMSDFDIQGDDNSPGLYN
SYFSSSKAESNDFIGGFGLGSKSPFSYTDTFSITSYHKGEIRGYVAYMDGDGPQIKPT
FVKEMGPDDKTGIEIVVPVEEKDFRNFAYEVSYIMRPFKDLAIINGLDREIDYFPDFD
DYYGVNPERYWPDRGGLYAIYGGIVYPIDGVIRDRNWLSIRNEVNYIKFPMGSLDIAP
SREALSLDDRTRKNIIERVKELSEKAFNEDVKRFKESTSPRHTYRELMKMGYSARDYM
ISNSVKFTTKNLSYKKMQSMFEPDSKLCNAGVVYEVNLDPRLKRIKQSHETSAVASSY
RLFGINTTKINIVIDNIKNRVNIVRGLARALDDSEFNNTLNIHHNERLLFINPEVESQ
IDLLPDIMAMFESDEVNIHYLSEIEALVKSYIPKVVKSKAPRPKAATAFKFEIKDGRW
EKRNYLRLTSEADEITGYVAYMHRSDIFSMDGTTSLCHPSMNILIRMANLIGINEFYV
IRPLLQKKVKELGQCQCIFEALRDLYVDAFDDVDYDKYVGYSSSAKRYIDKIIKYPEL
DFMMKYFSIDEVSEEYTRLANMVSSLQGVYFNGGKDTIGHDIWTVTNLFDVLSNNASK
NSDKMVAEFTKKFRIVSDFIGYRNSLSDDEVSQIAKTMKALAA"
gene complement(2200..2403)
/gene="rIIA.1"
/locus_tag="T4p002"
/db_xref="GeneID:1258774"
CDS complement(2200..2403)
/gene="rIIA.1"
/locus_tag="T4p002"
/codon_start=1
/transl_table=11
/product="rIIA.1 hypothetical protein"
/protein_id="NP_049617.1"
/db_xref="GeneID:1258774"
/translation="MKSYKVNLELFDKAVHREYRIIQRFFDMGEAEEFKTRFKDIRDK
IQSDTATKDELLEVAEVIKRNMN"
gene complement(2458..2990)
/gene="60"
/locus_tag="T4p003"
/db_xref="GeneID:1258779"
CDS complement(join(2458..2802,2853..2990))
/gene="60"
/locus_tag="T4p003"
/note="topoisomerase II in T4 and related phages an
insertion splits the large Topo II subunit in two parts
(gp60 and gp39); a 50-bp segment is inserted in T4 gene 60
that forms an mRNA secondary structure that is
translationally bypassed"
/codon_start=1
/transl_table=11
/product="gp60 topoisomerase II, large subunit, C-terminal
region"
/protein_id="NP_049618.1"
/db_xref="GeneID:1258779"
/translation="MKFVKIDSSSVDMKKYKLQNNVRRSIKSSSMNYANVAIMTDADH
DGLGSIYPSLLGFFSNWPELFEQGRIRFVKTPVIIAQVGKKQEWFYTVAEYESAKDAL
PKHSIRYIKGLGSLEKSEYREMIQNPVYDVVKLPENWKELFEMLMGDNADLRKEWMSQ
"
misc_feature complement(2803..2852)
/gene="60"
/locus_tag="T4p003"
/note="non-coding translational bypass region in mRNA due
to secondary structure formation"
gene complement(2971..3351)
/gene="60.1"
/locus_tag="T4p004"
/db_xref="GeneID:1258780"
CDS complement(2971..3351)
/gene="60.1"
/locus_tag="T4p004"
/codon_start=1
/transl_table=11
/product="gp60.1 hypothetical protein"
/protein_id="NP_049619.1"
/db_xref="GeneID:1258780"
/translation="MTCFKNEKGEVFRLHVNDPRIKTEKLVGVGNTVAATAKAAELEK
AKPWYNKSATNPEAVKLIPNLYEWYVTKYDPDHYKRTGVAKWKSVNNITVNSKLFGRA
FNEFKRGWIPDEKFYEVYNEICKN"
gene complement(3654..3767)
/gene="mobA"
/locus_tag="T4p005"
/db_xref="GeneID:1258782"
CDS complement(3654..3767)
/gene="mobA"
/locus_tag="T4p005"
/note="defective DNA endonuclease; H-N-H family; relative
of mobile endonucleases of filamentous fungi"
/codon_start=1
/transl_table=11
/product="MobA homing endonuclease pseudogene"
/protein_id="NP_049620.1"
/db_xref="GeneID:1258782"
/translation="MRGKTRVSKFKGEIHHILPRSMGGSDDNENLVKHDFS"
gene complement(3778..5328)
/gene="39"
/locus_tag="T4p006"
/db_xref="GeneID:1258807"
CDS complement(3778..5328)
/gene="39"
/locus_tag="T4p006"
/note="DNA-dependent ATPase, topoisomerase II in T4 and
related phages an insertion splits the large Topo II
subunit in two parts (gp60 and gp39); gp39; DNA-dependent
ATPase; membrane associated protein; bacteriophage T4
topoisomerase II is comprised of gp39, gp52, and gp60
subunits; topisomerase II catalyzes cleavage and
re-ligation of double-stranded DNA"
/codon_start=1
/transl_table=11
/product="DNA topoisomerase II large subunit"
/protein_id="NP_049621.1"
/db_xref="GeneID:1258807"
/translation="MIKNEIKILSDIEHIKKRSGMYIGSSANETHERFMFGKWESVQY
VPGLVKLIDEIIDNSVDEGIRTKFKFANKINVTIKNNQVTVEDNGRGIPQAMVKTPTG
EEIPGPVAAWTIPKAGGNFGDDKERVTGGMNGVGSSLTNIFSVMFVGETGDGQNNIVV
RCSNGMENKSWEDIPGKWKGTRVTFIPDFMSFETNELSQVYLDITLDRLQTLAVVYPD
IQFTFNGKKVQGNFKKYARQYDEHAIVQEQENCSIAVGRSPDGFRQLTYVNNIHTKNG
GHHIDCAMDDICEDLIPQIKRKFKIDVTKARVKECLTIVMFVRDMKNMRLIRQTKERL
TSPFGEIRSHIQLDAKKISRDILNNEAILMPIIEAALARKLAAEKAAETKAAKKASKA
KVHKHIKANLCGKDADTTLFLTEGDSAIGYLIDVRDKELHGGYPLRGKVLNSWGMSYA
DMLKNKELFDICAITGLVLGEKAFEEKEDGEWFTFELNGDTIIVNENDEVQINGKWIT
VGELRKNL"
gene complement(5398..5595)
/gene="39.1"
/locus_tag="T4p007"
/db_xref="GeneID:1258650"
CDS complement(5398..5595)
/gene="39.1"
/locus_tag="T4p007"
/codon_start=1
/transl_table=11
/product="gp39.1 hypothetical protein"
/protein_id="NP_049622.1"
/db_xref="GeneID:1258650"
/translation="MLINATKVLSSSGFTNIEITGYNWFGCSENDFQHTGFRAIGPTG
QKVEGTVCSGLFFKDSTIRFK"
gene complement(5702..5839)
/gene="39.2"
/locus_tag="T4p008"
/db_xref="GeneID:1258588"
CDS complement(5702..5839)
/gene="39.2"
/locus_tag="T4p008"
/codon_start=1
/transl_table=11
/product="gp39.2 hypothetical protein"
/protein_id="NP_049623.1"
/db_xref="GeneID:1258588"
/translation="MPLYDYKCQSKDCAKEYEKIKKISGRDTGVCPDCHRLAVRLVSA
S"
gene complement(5842..6267)
/gene="goF"
/locus_tag="T4p009"
/gene_synonym="comC-alpha; go9H"
/db_xref="GeneID:1258632"
CDS complement(5842..6267)
/gene="goF"
/locus_tag="T4p009"
/gene_synonym="comC-alpha; go9H"
/note="overcomes rho mutant effects"
/codon_start=1
/transl_table=11
/product="goF mRNA metabolism modulator"
/protein_id="NP_049624.1"
/db_xref="GeneID:1258632"
/translation="MAIKFEVNKWYQFKNKQAQENFIKDHTDNGIYARRLGMEPFKIL
DADYLGRPTKIMTSIGVLKRCAGGDILDENFIWLSTNEAGFFDEVENPYQAVEEQEQE
EKEQEQIEDFTEFPVMKVTIENNDQAWSLYQMLKAYFKE"
gene complement(6267..6482)
/gene="cef"
/locus_tag="T4p010"
/gene_synonym="comC-alpha.1; M1; mb"
/db_xref="GeneID:1258628"
CDS complement(6267..6482)
/gene="cef"
/locus_tag="T4p010"
/gene_synonym="comC-alpha.1; M1; mb"
/codon_start=1
/transl_table=11
/product="cytochrome C biogenesis protein CcmE"
/protein_id="NP_049625.1"
/db_xref="GeneID:1258628"
/translation="MKRKIVQNCTNDEFEDVLFDPNLVVVQKEHTSKFTHLTSVYVYE
KVGDKQPIYGVFREITEDGTTYWKEIY"
gene complement(6653..7141)
/gene="motB"
/locus_tag="T4p011"
/gene_synonym="dexA.-3"
/db_xref="GeneID:1258672"
CDS complement(6653..7141)
/gene="motB"
/locus_tag="T4p011"
/gene_synonym="dexA.-3"
/codon_start=1
/transl_table=11
/product="MotB modifier of transcription"
/protein_id="NP_049626.1"
/db_xref="GeneID:1258672"
/translation="MIINIGELARVSDKSRSKAAGKLVEVVSIQLKHGVKDEDSEVKV
RIIPKDGKSKPQFGYVRAKFLESAFLKAVPAKGIETIDTSHVGVDFKWKLGQAIKFIA
PCEFNFIKDDGRVVYTRAMCGYITDQWVEDGVKLYNVVFLGTYKVIPESWIKHYSNAL
YA"
gene complement(7291..7650)
/gene="motB.1"
/locus_tag="T4p012"
/gene_synonym="dexA.-2"
/db_xref="GeneID:1258611"
CDS complement(7291..7650)
/gene="motB.1"
/locus_tag="T4p012"
/gene_synonym="dexA.-2"
/codon_start=1
/transl_table=11
/product="MotB.1 hypothetical protein"
/protein_id="NP_049627.1"
/db_xref="GeneID:1258611"
/translation="MIKINTAYQMKKPSEIDFQTMSNTTDSKFWELLGTTGGYPFTVI
SVNSGILIGTVYMEIRNYYGRVSSFIIYEEDFNLLTEIEKPEDPTDLLCKAVYIRRPF
ANPIGGWVTDQWIGRWR"
gene complement(7661..8161)
/gene="motB.2"
/locus_tag="T4p013"
/gene_synonym="dexA.-1"
/db_xref="GeneID:1258758"
CDS complement(7661..8161)
/gene="motB.2"
/locus_tag="T4p013"
/gene_synonym="dexA.-1"
/codon_start=1
/transl_table=11
/product="MotB.2 hypothetical protein"
/protein_id="NP_049628.1"
/db_xref="GeneID:1258758"
/translation="MKIYRVESSFSILNYEDAITIRRDLCVQITPYRSIIDSWSEEWL
LHVGYDRPNFMHHSNDNKRIPVPHEDKLLVKNANIVINTKFKKDYVGVEYHIPGWFVA
LYHFAFASEYDMMKWFTREEREELASKGFYLAVYEVPDDQVIIGGHQVMFRKSYAELK
GFITLN"
gene complement(8225..8908)
/gene="dexA"
/locus_tag="T4p014"
/db_xref="GeneID:1258605"
CDS complement(8225..8908)
/gene="dexA"
/locus_tag="T4p014"
/note="3' to 5' DNA exonuclease activity involved in T4
DNA replication and host DNA degradation; DexA; DNA
exonuclease A; 3' to 5' DNA exonuclease"
/codon_start=1
/transl_table=11
/product="3'-5' exoribonuclease"
/protein_id="NP_049629.1"
/db_xref="GeneID:1258605"
/translation="MFDFIIDFETMGSGEKAAVIDLAVIAFDPNPEVVETFDELVSRG
IKIKFDLKSQKGHRLFTKSTIEWWKNQSPEARKNIAPSDEDVSTIDGIAKFNDYINAH
NIDPWKSQGWCRGMSFDFPILVDLIRDIQRLNGVSENELDTFKLEPCKFWNQRDIRTR
IEALLLVRDMTTCPLPKGTLDGFVAHDSIHDCAKDILMMKYALRYAMGLEDAPSEEEC
DPLSLPTKR"
gene complement(8908..9150)
/gene="dexA.1"
/locus_tag="T4p015"
/db_xref="GeneID:1258785"
CDS complement(8908..9150)
/gene="dexA.1"
/locus_tag="T4p015"
/codon_start=1
/transl_table=11
/product="DexA.1 hypothetical protein"
/protein_id="NP_049630.1"
/db_xref="GeneID:1258785"
/translation="MIELSWYQFKSLMTNVKVVIQENPGPENITIREKASKIVYSLEE
IQKDIESMAKFIDEPINKVYIQDYTVGQIRDLARKI"
gene complement(9143..9388)
/gene="dexA.2"
/locus_tag="T4p016"
/db_xref="GeneID:1258616"
CDS complement(9143..9388)
/gene="dexA.2"
/locus_tag="T4p016"
/codon_start=1
/transl_table=11
/product="dextranase"
/protein_id="NP_049631.1"
/db_xref="GeneID:1258616"
/translation="MEITKDQFYLLQDKVSEIYEIAYSKNRETVKIESSKLMLQLEEI
ERDLIALEFFCGEVKTVTINDYVLGEISYLYEAIIND"
gene complement(9410..10729)
/gene="dda"
/locus_tag="T4p017"
/gene_synonym="sud"
/db_xref="GeneID:1258784"
CDS complement(9410..10729)
/gene="dda"
/locus_tag="T4p017"
/gene_synonym="sud"
/note="DNA-dependent ATPase, DNA helicase"
/codon_start=1
/transl_table=11
/product="AAA family ATPase"
/protein_id="NP_049632.1"
/db_xref="GeneID:1258784"
/translation="MTFDDLTEGQKNAFNIVMKAIKEKKHHVTINGPAGTGKTTLTKF
IIEALISTGGTGIILAAPTHAAKKILSKLSGKEASTIHSILKINPVTYEENVLFEQKE
VPDLAKCRVLICDEVSMYDRKLFKILLSTIPPWCTIIGIGDNKQIRPVEPGENTAYIS
PFFTHKDFYQCELTEVKRSNAPIIDVATDVRNGKWNYDKVVDGHGVRGFTGDTALRDF
MVNYFSIVKSLDDLFENRVMAFTNKSVDKLNSIIRKKIFETDKDFIVGEIIVMQEPLF
KTYKIDGKPVSEIIFNNGQLVRIIEAEYTSTFVKARGVPGEYLIRHWDLTVETYGDDE
YYREKIKIISSDEELYKFNLFLAKTAETYKNWNKGGKAPWSDFWDAKSQFSKVKALPA
STFHKAQGMSVDRAFIYTPCIHYADVELAQQLLYVGVTRGRYDVFYV"
gene complement(10726..11037)
/gene="dda.1"
/locus_tag="T4p018"
/db_xref="GeneID:1258786"
CDS complement(10726..11037)
/gene="dda.1"
/locus_tag="T4p018"
/codon_start=1
/transl_table=11
/product="Dda.1 hypothetical protein"
/protein_id="NP_049633.1"
/db_xref="GeneID:1258786"
/translation="MVYVYAIVYRDKDGFTAPVPLDEHRPAVFFEWKIADKVFTTLKE
QYRLALGKGIPRLVETPRKFWFNKIEVKHVKPDVDTQRLYQRILDTGRIVSIPIAGNL
R"
gene complement(11039..11785)
/gene="srd"
/locus_tag="T4p019"
/gene_synonym="dda.2"
/db_xref="GeneID:1258797"
CDS complement(11039..11785)
/gene="srd"
/locus_tag="T4p019"
/gene_synonym="dda.2"
/note="postulated decoy of sigma factors RpoD and RpoS"
/codon_start=1
/transl_table=11