HHfrag 2.1

HHfrag-2.1.zip

This is the second official release of the HHfrag software, as described in:

• HHfrag: HMM-based fragment detection using HHpred. Bioinformatics (2011)
• Confidence-guided local structure prediction with HHfrag. PLOS ONE (2013)

This release contains all supporting database files and documentation required to run the program. HHfrag is part of CSB, so no source code is included in this package. If you are looking for the source code, please navigate to CSB, package csb.apps.hhfrag. Download the matching CSB release from here:

csb-1.2.1.tar.gz

This is a minor maintenance release:

• csb.apps.buildhmm is now compatible with the latest HH-suite
• fixed a number of bugs

For more information and installation instructions please refer to the README files included in the release packages.