gocmd sync gives error when used with "--bulk_upload" flag

[jnimoth]

Similar to the other issue from today, I also tried the "--bulk_upload" flag. Using it results for me in an error and not synchronization being done.

user@ssh:~/gocommands/latest$ ./gocmd sync -d --bulk_upload ~/Downloads/varian_agilent i:gocmd_sync_no_bulk_dir
time="2024-12-05 18:19:16.800" level=debug msg="use sessionID - 3535676" function=ProcessCommonFlags package=flag
time="2024-12-05 18:19:16.800" level=debug msg="reading icommands configuration file \"/home/user/.irods/irods_environment.json\"" function=Load package=icommands struct=ICommandsEnvironmentManager
time="2024-12-05 18:19:16.802" level=debug msg="reading icommands password file \"/home/user/.irods/.irodsA\"" function=Load package=icommands struct=ICommandsEnvironmentManager
time="2024-12-05 18:19:16.802" level=debug msg="run bput with args: [--diff --recursive --sync -d --bulk_upload /home/user/Downloads/varian_agilent i:gocmd_sync_no_bulk_dir]" function=syncLocalToIRODS package=subcmd struct=SyncCommand
time="2024-12-05 18:19:16.802" level=debug msg="use sessionID - 3535676" function=ProcessCommonFlags package=flag
time="2024-12-05 18:19:16.803" level=debug msg="reading icommands configuration file \"/home/user/.irods/irods_environment.json\"" function=Load package=icommands struct=ICommandsEnvironmentManager
time="2024-12-05 18:19:16.803" level=debug msg="reading icommands password file \"/home/user/.irods/.irodsA\"" function=Load package=icommands struct=ICommandsEnvironmentManager
time="2024-12-05 18:19:16.804" level=debug msg="Connecting to store-test.data.rug.nl:1247" function=connectTCP package=connection struct=IRODSConnection
time="2024-12-05 18:19:16.808" level=debug msg="Start up an iRODS connection" function=startup package=connection struct=IRODSConnection
time="2024-12-05 18:19:17.332" level=debug msg="Start up CS Negotiation" function=startup package=connection struct=IRODSConnection
time="2024-12-05 18:19:17.332" level=debug msg="Client policy \"CS_NEG_REQUIRE\", server policy \"CS_NEG_DONT_CARE\"" function=startup package=connection struct=IRODSConnection
time="2024-12-05 18:19:17.336" level=debug msg="Start up SSL" function=sslStartup package=connection struct=IRODSConnection
time="2024-12-05 18:19:17.377" level=debug msg="Logging in using pam authentication method" function=loginPAMWithToken package=connection struct=IRODSConnection
time="2024-12-05 18:19:17.616" level=debug msg="Reuse an idle connection" function=Get package=session struct=ConnectionPool
time="2024-12-05 18:19:17.630" level=debug msg="failed to commit transaction" error=SYS_NO_API_PRIV function=endTransaction package=session struct=IRODSSession
time="2024-12-05 18:19:17.806" level=debug msg="Returning a connection" function=Return package=session struct=ConnectionPool
time="2024-12-05 18:19:17.807" level=debug msg="Reuse an idle connection" function=Get package=session struct=ConnectionPool
time="2024-12-05 18:19:17.807" level=debug msg="Connecting to store-test.data.rug.nl:1247" function=connectTCP package=connection struct=IRODSConnection
time="2024-12-05 18:19:17.810" level=debug msg="Start up an iRODS connection" function=startup package=connection struct=IRODSConnection
time="2024-12-05 18:19:18.301" level=debug msg="Start up CS Negotiation" function=startup package=connection struct=IRODSConnection
time="2024-12-05 18:19:18.301" level=debug msg="Client policy \"CS_NEG_REQUIRE\", server policy \"CS_NEG_DONT_CARE\"" function=startup package=connection struct=IRODSConnection
time="2024-12-05 18:19:18.303" level=debug msg="Start up SSL" function=sslStartup package=connection struct=IRODSConnection
time="2024-12-05 18:19:18.343" level=debug msg="Logging in using pam authentication method" function=loginPAMWithToken package=connection struct=IRODSConnection
time="2024-12-05 18:19:18.566" level=debug msg="Created a new connection" function=Get package=session struct=ConnectionPool
time="2024-12-05 18:19:19.517" level=debug msg="Returning a connection" function=Return package=session struct=ConnectionPool
time="2024-12-05 18:19:20.404" level=debug msg="Returning a connection" function=Return package=session struct=ConnectionPool
time="2024-12-05 18:19:20.405" level=debug msg="use default staging path \"/testrug/home/[email protected]/.gocmd_staging\" for target \"/testrug/home/[email protected]\"" function=getStagingDir package=subcmd struct=BputCommand
time="2024-12-05 18:19:20.405" level=debug msg="Disconnecting the connection" function=Disconnect package=connection struct=IRODSConnection
time="2024-12-05 18:19:20.407" level=debug msg="Disconnecting the connection" function=Disconnect package=connection struct=IRODSConnection
time="2024-12-05 18:19:20.409" level=error msg="failed to sync (from local):\n    github.com/cyverse/gocommands/cmd/subcmd.(*SyncCommand).Process\n        /github/workspace/cmd/subcmd/sync.go:114\n  - failed to sync (from local to iRODS):\n    github.com/cyverse/gocommands/cmd/subcmd.(*SyncCommand).syncLocal\n        /github/workspace/cmd/subcmd/sync.go:138\n  - failed to get a common root directory for source paths:\n    github.com/cyverse/gocommands/cmd/subcmd.(*BputCommand).Process\n        /github/workspace/cmd/subcmd/bput.go:206\n  - data object/collection not found for path \"\"" function=main package=main
failed to sync (from local):
    github.com/cyverse/gocommands/cmd/subcmd.(*SyncCommand).Process
        /github/workspace/cmd/subcmd/sync.go:114
  - failed to sync (from local to iRODS):
    github.com/cyverse/gocommands/cmd/subcmd.(*SyncCommand).syncLocal
        /github/workspace/cmd/subcmd/sync.go:138
  - failed to get a common root directory for source paths:
    github.com/cyverse/gocommands/cmd/subcmd.(*BputCommand).Process
        /github/workspace/cmd/subcmd/bput.go:206
  - data object/collection not found for path ""
File or directory "" is not found!