ci.yaml

name: CI

on: [push, pull_request]

jobs:
  build:
    runs-on: ubuntu-latest
    timeout-minutes: 30
    defaults:
      run:
        shell: bash -l {0}
    strategy:
      fail-fast: false
      matrix:
        jobqueue: ["htcondor", "pbs", "sge", "slurm", "none"]

    steps:
      - name: Cancel previous runs
        uses: styfle/cancel-workflow-action@0.7.0
        with:
            access_token: ${{ github.token }}
      - name: Checkout source
        uses: actions/checkout@v2

      - name: Setup Empty Conda Environment with Mamba
        if: matrix.jobqueue == 'none'
        uses: conda-incubator/setup-miniconda@v2
        with:
          channels: conda-forge
          mamba-version: "*"
          activate-environment: dask-jobqueue
          auto-activate-base: false
         
      - name: Setup dask-jobqueue conda environment 
        if: matrix.jobqueue == 'none'
        run: |
          mamba env update -f ci/environment.yml
          mamba list

      - name: Setup Job queuing system
        if: matrix.jobqueue != 'none'
        run: |
          source ci/${{ matrix.jobqueue }}.sh
          jobqueue_before_install

      - name: Install dask-jobqueue
        run: |
          source ci/${{ matrix.jobqueue }}.sh
          jobqueue_install

      - name: Test
        run: |
          source ci/${{ matrix.jobqueue }}.sh
          jobqueue_script

      - name: Cleanup
        if: always()
        run: |
          source ci/${{ matrix.jobqueue }}.sh
          jobqueue_after_script