diff --git a/03-ncbi-sra.md b/03-ncbi-sra.md index de903426..4e207533 100644 --- a/03-ncbi-sra.md +++ b/03-ncbi-sra.md @@ -47,7 +47,7 @@ The excerpt from the paper below includes information on how to locate the seque > version of the paper. Correspondence and requests for materials should be > addressed to R.E.L. (lenski *at* msu.edu) -**At the beginning of this workshop we gave you [experimental information about these data](https://www.datacarpentry.org/organization-genomics/data/). This lesson uses a *subset* of SRA files, from a small *subproject* of the BioProject database +**At the beginning of this workshop we gave you [experimental information about these data](https://www.datacarpentry.org/organization-genomics/data). This lesson uses a *subset* of SRA files, from a small *subproject* of the BioProject database "PRJNA294072". To find these data you can follow the instructions below:** 1. Notice that the paper references "PRJNA294072" as a "BioProject" at NCBI. If you go to the [NCBI website](https://www.ncbi.nlm.nih.gov/) and search for "PRJNA294072" you will be shown a link to the "Long-Term Evolution Experiment with E. coli" BioProject. Here is the link to that database: [https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA294072](https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA294072). diff --git a/index.md b/index.md index 242e5e5d..1d682de1 100644 --- a/index.md +++ b/index.md @@ -33,7 +33,7 @@ concept of genomic variation within a population. Participants should bring thei This lesson is part of a workshop that uses data hosted on an Amazon Machine Instance (AMI). Workshop participants will be given information on how to log-in to the AMI during the workshop. Learners using these materials for self-directed study will need to set up their own -AMI. Information on setting up an AMI and accessing the required data is provided on the [Genomics Workshop setup page](https://www.datacarpentry.org/genomics-workshop/setup.html). +AMI. Information on setting up an AMI and accessing the required data is provided on the [Genomics Workshop setup page](https://www.datacarpentry.org/genomics-workshop/index.html). :::::::::::::::::::::::::::::::::::::::::::::::::: diff --git a/md5sum.txt b/md5sum.txt index 659d4eb4..98bc114c 100644 --- a/md5sum.txt +++ b/md5sum.txt @@ -2,10 +2,10 @@ "CODE_OF_CONDUCT.md" "c93c83c630db2fe2462240bf72552548" "site/built/CODE_OF_CONDUCT.md" "2023-05-02" "LICENSE.md" "b24ebbb41b14ca25cf6b8216dda83e5f" "site/built/LICENSE.md" "2023-05-02" "config.yaml" "301fc4a15182dcbcdaf4b39112259eac" "site/built/config.yaml" "2023-05-02" -"index.md" "952189b1c796fb503a81927376cc70fc" "site/built/index.md" "2023-06-13" +"index.md" "33e8d0e0bc8849f755a4bc0f598b6a7a" "site/built/index.md" "2023-11-20" "episodes/01-tidiness.md" "4df50eab6edeb9e266d3f427fc409c8b" "site/built/01-tidiness.md" "2023-06-14" "episodes/02-project-planning.md" "b7cba76b7735072570d4f4f4754f3e92" "site/built/02-project-planning.md" "2023-05-02" -"episodes/03-ncbi-sra.md" "a783ea2b9a22fe92c996dce6f66583b0" "site/built/03-ncbi-sra.md" "2023-06-23" +"episodes/03-ncbi-sra.md" "21c8c43c3e94862179eb75f1c32379ca" "site/built/03-ncbi-sra.md" "2023-11-20" "instructors/data.md" "3bb097fa45131e73e0860e8d4012d509" "site/built/data.md" "2023-05-02" "instructors/instructor-notes.md" "f3f7514a8b65d990adba4a5f874c1997" "site/built/instructor-notes.md" "2023-05-02" "instructors/old-ncbi.md" "832bcf8a0876a6e571b1e79bfa84437e" "site/built/old-ncbi.md" "2023-05-02"