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length inversed #1

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lmanchon opened this issue Oct 5, 2017 · 1 comment
Open

length inversed #1

lmanchon opened this issue Oct 5, 2017 · 1 comment
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@lmanchon
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lmanchon commented Oct 5, 2017

--Hi,

i think i have pointed an error:
try with this file:

test_DNA_regular
CATCTCTACGCGATACTGGTCTCGTAACTTCTAGAACGTTGGTGCGCTACACTGATTTTT
TGTTGGTCTACGTGAGGTGTTGTCACAGTCCAGTTGCGATGTCGCACATTAGATAGTAAG
CTCTAGCCACGATATACGCTGAGATGAACACACGGGCACCAAATACCTGACAAAACTATC
TTCTAGGGTGCGCTCTCCTTGTGCCCACAGGGGGACCCATCACGGTTAGATCCCGAAGTG
CGTGTCACCACTCCCTCTTCTCACTTGTGGTAAGGTGGTGCGACATCCTCCCGCCAGTCT
ATTTGGCAAGGCCACCGATATGGGATCCCGAGATCTGCTGCATTCATTCGTCACCTCACA
ACCGGTGCCTAGCCTGCGGCCGTCCCCTGACGGTGCATAATCATACCTTTTGGACGTCGA
ATTCAGAATCCTCTCGGTTCGATCCCCGCTTGTGGAGTATGTGTTCCACACCTAGATATT
GTCTTTTGAAGAGCCAGCACGGAAGCATCTCTGCAACGCATCGGCAATATGGGCGACGAG
AAGACAAGGCGGTGAGTTTGGTGTCTCAGACTAAATATCTAAAATATTGCGACCAGGTGG
TGACCTTTCTGGTCCCACTATCTCCTTTTGCCAACTTCGCTGGAAAGAGATTAATGACCC
CTCATGTGTCCGGGAGTGATTCCCACCGGTACAGTTTCTGTCCGCGGGTGTGCAGGCCTA
GATGTCGTCCGCACAAGTTGCCACAGCATAGATGCTAAATCTGCGGCGACCCAACACTAC
GCAGGCCTTAAATACTTTAGATAGCGCGGCCACGCGAGACTAACTCAGACCCTCTAGGCA
GTCTTTGGAAGCTTATCTGCCTCCTCTCATGACACCTCCCTGCAGCGTCCATTAATCGCA
CGCACTAGAAATGTCGAGCACTATATATAGCGTGCCGAATTTGCGCCAGTCTTTACATTG
AGTCCCGCCCACCCAGGAGGTGCAGTGTGGAGACAGATTC
test_DNA_small
CATCTCTACGCGATACTGGTCTCGTAACTTCTAGAACGTTGGTGCGCTACACTGATTTTT
TGTTGGTCTACGTGAGGTGTTGTCACAGTCCAGTTGCGATGTCGCACATTAGATAGTAAG
CTCTAGCCACGATATACGCTGAGATGAACACACGGGCACCAAATACCTGACAAAACTATC
GTCTTTGGAAGCTTATCTGCCTCCTCTCATGACACCTCCCTGCAGCGTCCATTAATCGCA
CGCACTAGAAATGTCGAGCACTATATATAGCGTGCCGAATTTGCGCCAGTCTTTACATTG
AGTCCCGCCCACCCAGGAGGTGCAGTGTGGAGACAGATTC

/multifastats.py -f test.fasta -s

more single_testfasta_051017111839.csv
N,ID,Type,Length,%GC,Mol Weight
1,test_DNA_regular,DNA,340,51.90,308032.08
2,test_DNA_small,DNA,1000,48.82,104741.75

the length of sequence are inversed !

best,
Laurent --
@davidrequena davidrequena self-assigned this Oct 6, 2017
@davidrequena
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Thanks Laurent! I'll fix this.

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