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chore(pt): Change the type of do_message_passing from int to bool in DeepPotPT and DeepSpinPT classes #4391

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merged 2 commits into from
Nov 21, 2024

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@njzjz njzjz commented Nov 20, 2024

Fix #4366.

  • Update the type of do_message_passing to bool in the DeepPotPT class and init method in source/api_cc/include/DeepPotPT.h and source/api_cc/src/DeepPotPT.cc
  • Update the type of do_message_passing to bool in the DeepSpinPT class and init method in source/api_cc/include/DeepSpinPT.h and source/api_cc/src/DeepSpinPT.cc

Summary by CodeRabbit

  • New Features

    • Enhanced error handling for exceptions from the PyTorch library in both DeepPotPT and DeepSpinPT classes.
    • Simplified boolean checks for message passing in the compute methods of both classes.
  • Bug Fixes

    • Improved robustness in the DeepPotPT constructor to prevent resource leaks during initialization.
  • Documentation

    • Updated method signatures to reflect changes in parameter types and structures.

…l` in `DeepPotPT` and `DeepSpinPT` classes

Fix deepmodeling#4366.

* Update the type of `do_message_passing` to `bool` in the `DeepPotPT` class and `init` method in `source/api_cc/include/DeepPotPT.h` and `source/api_cc/src/DeepPotPT.cc`
* Update the type of `do_message_passing` to `bool` in the `DeepSpinPT` class and `init` method in `source/api_cc/include/DeepSpinPT.h` and `source/api_cc/src/DeepSpinPT.cc`
@njzjz njzjz requested a review from Copilot November 20, 2024 20:23

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Copilot wasn't able to review any files in this pull request.

Files not reviewed (4)
  • source/api_cc/include/DeepPotPT.h: Language not supported
  • source/api_cc/include/DeepSpinPT.h: Language not supported
  • source/api_cc/src/DeepPotPT.cc: Language not supported
  • source/api_cc/src/DeepSpinPT.cc: Language not supported
@njzjz njzjz linked an issue Nov 20, 2024 that may be closed by this pull request
@github-actions github-actions bot added the C++ label Nov 20, 2024
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coderabbitai bot commented Nov 20, 2024

📝 Walkthrough

Walkthrough

The pull request modifies the do_message_passing member variable in the DeepPotPT and DeepSpinPT classes, changing its type from int to bool to better represent its binary nature. Additionally, it enhances error handling in the translate_error method and simplifies the condition checks for do_message_passing in the compute methods of both classes. Constructor modifications ensure that exceptions during initialization are properly handled. These changes improve code clarity and robustness without altering existing functionality.

Changes

File Change Summary
source/api_cc/include/DeepPotPT.h Changed int do_message_passing to bool do_message_passing.
source/api_cc/include/DeepSpinPT.h Changed int do_message_passing to bool do_message_passing.
source/api_cc/src/DeepPotPT.cc Updated translate_error for enhanced exception handling, simplified do_message_passing checks, modified constructor for exception safety, and updated method signatures (removed nghost and lmp_list).
source/api_cc/src/DeepSpinPT.cc Updated translate_error for enhanced exception handling, simplified do_message_passing checks, and modified constructor for exception safety. Updated method signatures (removed nghost and lmp_list).

Assessment against linked issues

Objective Addressed Explanation
Update do_message_passing to bool in DeepPotPT.h and DeepSpinPT.h (#4366)

Possibly related PRs

Suggested labels

Core

Suggested reviewers

  • njzjz
  • wanghan-iapcm

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Actionable comments posted: 0

🧹 Outside diff range and nitpick comments (2)
source/api_cc/include/DeepSpinPT.h (1)

260-260: Update comment to use boolean terminology.

The comment still uses numeric values ("1:dpa2 model 0:others") despite the boolean type change. Consider updating it to use boolean terminology for clarity:

-  bool do_message_passing;  // 1:dpa2 model 0:others
+  bool do_message_passing;  // true: dpa2 model, false: others
source/api_cc/src/DeepSpinPT.cc (1)

Line range hint 253-255: Consider tracking unsupported spin model features.

There are multiple commented sections indicating that certain spin model features are not supported yet. These should be tracked to ensure they're implemented in future updates.

Would you like me to create a GitHub issue to track the implementation of these unsupported features? The issue would include:

  1. List of pending implementations (virial calculations)
  2. Affected methods and their locations
  3. Dependencies and requirements

Also applies to: 308-310, 419-421, 451-453

📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Reviewing files that changed from the base of the PR and between f9976dd and 9e4eeb8.

📒 Files selected for processing (4)
  • source/api_cc/include/DeepPotPT.h (1 hunks)
  • source/api_cc/include/DeepSpinPT.h (1 hunks)
  • source/api_cc/src/DeepPotPT.cc (2 hunks)
  • source/api_cc/src/DeepSpinPT.cc (2 hunks)
🔇 Additional comments (8)
source/api_cc/include/DeepSpinPT.h (1)

260-260: LGTM! Type change improves type safety.

The change from int to bool is semantically correct as this variable represents a binary state.

Let's verify that all usages of this variable have been updated to handle boolean values:

✅ Verification successful

Type change is correctly implemented across the codebase

The verification shows that do_message_passing is:

  • Properly declared as bool in all header files (DeepSpinPT.h, DeepPotPT.h, DeepPotJAX.h)
  • Correctly used with boolean operations in implementation files
  • Assigned boolean values from toBool() and get_scalar<bool> conversions
🏁 Scripts executed

The following scripts were executed for the analysis:

Script:

#!/bin/bash
# Search for any remaining integer comparisons with do_message_passing
rg -p "do_message_passing\s*(==|!=)\s*[0-9]" source/

Length of output: 54


Script:

#!/bin/bash
# Let's search for all usages of do_message_passing to verify the changes
rg -p "do_message_passing" source/

Length of output: 815

source/api_cc/include/DeepPotPT.h (1)

338-338: LGTM! Consider updating the comment to reflect boolean values.

The change from int to bool is appropriate as it better represents the binary nature of the flag. However, the comment could be updated to use boolean terminology.

-  bool do_message_passing;  // 1:dpa2 model 0:others
+  bool do_message_passing;  // true:dpa2 model false:others

Let's verify the usage of this variable in the implementation:

✅ Verification successful

The type change from int to bool is safe and the comment update suggestion is valid

The verification shows that do_message_passing is:

  • Initialized from boolean values (get_scalar<bool> or toBool())
  • Only used in conditional statements (if checks)
  • No arithmetic operations or integer-specific usage found

The original review comment's suggestion to update the comment style is valid, while the type change is safe and consistent with the actual usage in the codebase.

🏁 Scripts executed

The following scripts were executed for the analysis:

Script:

#!/bin/bash
# Description: Check how do_message_passing is used in the implementation
# Look for any arithmetic operations or integer-specific usage

# Search in source files
rg -A 3 "do_message_passing" source/api_cc/src/

Length of output: 2863

source/api_cc/src/DeepPotPT.cc (4)

Line range hint 13-30: LGTM! Comprehensive error handling implementation.

The error handling implementation properly catches and translates different types of PyTorch exceptions (c10::Error, torch::jit::JITException, std::runtime_error) with clear error messages.


Line range hint 39-43: LGTM! Improved constructor error handling.

The try-catch block ensures proper cleanup in case of initialization failures, preventing resource leaks.


174-174: LGTM! Simplified message passing condition checks.

The changes correctly implement the transition from integer to boolean type for do_message_passing, making the code more idiomatic and type-safe.

Also applies to: 237-237


Line range hint 1-1: Verify consistent usage of do_message_passing across the codebase.

Let's ensure all usages of do_message_passing have been updated to use boolean operations.

✅ Verification successful

All usages of do_message_passing have been properly updated to use boolean type

The verification shows that:

  • No integer comparisons with do_message_passing remain in the codebase
  • All declarations consistently use bool type
  • All assignments use boolean values or .toBool() conversions
  • All conditionals use boolean context (if (do_message_passing))
🏁 Scripts executed

The following scripts were executed for the analysis:

Script:

#!/bin/bash
# Search for any remaining integer comparisons with do_message_passing
rg -p "do_message_passing\s*(==|!=)\s*[0-9]" || echo "No integer comparisons found"

# Search for all usages of do_message_passing to verify the changes are complete
rg -p "do_message_passing"

Length of output: 921

source/api_cc/src/DeepSpinPT.cc (2)

Line range hint 13-30: LGTM! Enhanced error handling with better context.

The error handling improvements provide better debugging capabilities by catching specific PyTorch exceptions and adding descriptive prefixes to error messages.


182-182: LGTM! Simplified boolean conditions.

The changes align with the PR objective, converting do_message_passing comparisons from integer to boolean evaluation. This improves code readability while maintaining the same functionality.

Also applies to: 237-237

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codecov bot commented Nov 20, 2024

Codecov Report

Attention: Patch coverage is 75.00000% with 1 line in your changes missing coverage. Please review.

Project coverage is 84.50%. Comparing base (447ea94) to head (9e4eeb8).
Report is 12 commits behind head on devel.

Files with missing lines Patch % Lines
source/api_cc/src/DeepSpinPT.cc 50.00% 0 Missing and 1 partial ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##            devel    #4391      +/-   ##
==========================================
- Coverage   84.54%   84.50%   -0.04%     
==========================================
  Files         597      604       +7     
  Lines       56816    56944     +128     
  Branches     3486     3487       +1     
==========================================
+ Hits        48036    48122      +86     
- Misses       7653     7697      +44     
+ Partials     1127     1125       -2     

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.


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@wanghan-iapcm wanghan-iapcm added this pull request to the merge queue Nov 21, 2024
Merged via the queue into deepmodeling:devel with commit ec6e903 Nov 21, 2024
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Update do_message_passing to bool in DeepPotPT.h and DeepSpinPT.h
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