-
Notifications
You must be signed in to change notification settings - Fork 1
/
Copy pathsearchindex.js
1 lines (1 loc) · 453 KB
/
searchindex.js
1
Search.setIndex({"alltitles":{"About":[[0,null]],"Acknowledgements":[[0,"acknowledgements"],[77,"acknowledgements"],[78,"acknowledgements"],[81,"acknowledgements"],[83,"acknowledgements"]],"Adding new format classes":[[4,"adding-new-format-classes"]],"Advanced use - Choosing reflections to use for minimisation":[[1,"advanced-use-choosing-reflections-to-use-for-minimisation"]],"Advanced use - Controlling the scaling models":[[1,"advanced-use-controlling-the-scaling-models"]],"Algorithms":[[19,null]],"Analysis of individually processed datasets":[[83,"analysis-of-individually-processed-datasets"]],"Analysis of jointly refined datasets":[[83,"analysis-of-jointly-refined-datasets"]],"Applying the corrected metrology":[[81,"applying-the-corrected-metrology"]],"Array Family":[[20,null]],"Attendees":[[98,"attendees"]],"Basic parameters":[[34,"basic-parameters"],[36,"basic-parameters"],[37,"basic-parameters"],[38,"basic-parameters"],[39,"basic-parameters"],[40,"basic-parameters"],[41,"basic-parameters"],[42,"basic-parameters"],[43,"basic-parameters"],[44,"basic-parameters"],[45,"basic-parameters"],[46,"basic-parameters"],[47,"basic-parameters"],[49,"basic-parameters"],[50,"basic-parameters"],[51,"basic-parameters"],[52,"basic-parameters"],[53,"basic-parameters"],[54,"basic-parameters"],[55,"basic-parameters"],[57,"basic-parameters"],[58,"basic-parameters"],[59,"basic-parameters"],[60,"basic-parameters"],[61,"basic-parameters"],[62,"basic-parameters"],[63,"basic-parameters"],[64,"basic-parameters"],[65,"basic-parameters"],[66,"basic-parameters"],[67,"basic-parameters"],[68,"basic-parameters"],[69,"basic-parameters"],[70,"basic-parameters"],[72,"basic-parameters"]],"Basis vector search strategies":[[4,"basis-vector-search-strategies"]],"Board":[[93,"board"]],"Bookkeeping":[[76,"bookkeeping"]],"Bravais Lattice Refinement":[[82,"bravais-lattice-refinement"],[85,"bravais-lattice-refinement"],[86,"bravais-lattice-refinement"]],"Bravais lattice determination":[[87,"bravais-lattice-determination"]],"Build instructions":[[48,"build-instructions"]],"Built-in help":[[7,"built-in-help"]],"Centred or pseudocentred?":[[77,"centred-or-pseudocentred"]],"Check indexing symmetry":[[78,"check-indexing-symmetry"]],"Checking the symmetry":[[86,"checking-the-symmetry"]],"Citing DIALS":[[89,"citing-dials"]],"Class Methods":[[4,"class-methods"]],"Cluster Comparisons":[[76,"cluster-comparisons"]],"Community support activities":[[93,"community-support-activities"]],"Conclusions":[[77,"conclusions"],[78,"conclusions"]],"Contact":[[89,"contact"]],"Contents":[[4,"contents"]],"Conventions":[[2,null]],"Converting to a centred lattice":[[77,"converting-to-a-centred-lattice"]],"Coordinate frames":[[2,"coordinate-frames"]],"DIALS 1: 12th-13th June 2012 (Diamond Light Source, UK)":[[97,null]],"DIALS Application to XFEL Crystallography":[[95,"dials-application-to-xfel-crystallography"]],"DIALS How-To guides":[[88,null]],"DIALS Journal Articles":[[95,"dials-journal-articles"]],"DIALS License":[[91,null]],"DIALS Newsletter Articles":[[95,"dials-newsletter-articles"]],"DIALS Reports":[[95,"dials-reports"]],"DIALS Synchrotron Applications":[[95,"dials-synchrotron-applications"]],"DIALS UK":[[0,"dials-uk"]],"DIALS US":[[0,"dials-us"]],"DIALS for 3DED/MicroED":[[95,"dials-for-3ded-microed"]],"DIALS for neutron diffraction":[[94,"dials-for-neutron-diffraction"]],"DIALS-3: 22nd May 2013 (Cambridge, UK)":[[98,null]],"DIALS: Diffraction Integration for Advanced Light Sources":[[89,null]],"DPF3 Part 1: Correcting poor initial geometry":[[78,null]],"DPF3 Part 2: A question of centring":[[77,null]],"Data":[[74,"data"],[75,"data"],[76,"data"],[87,"data"]],"Data collection videos":[[73,"data-collection-videos"]],"Data files":[[3,null]],"Dataset 1":[[75,"dataset-1"],[75,"id1"],[75,"id11"]],"Dataset 2":[[75,"dataset-2"],[75,"id2"],[75,"id12"]],"Dataset 3":[[75,"dataset-3"],[75,"id3"],[75,"id13"]],"Dataset 4":[[75,"dataset-4"],[75,"id4"],[75,"id14"]],"Dataset 5":[[75,"dataset-5"],[75,"id5"],[75,"id15"]],"Dataset 6":[[75,"dataset-6"],[75,"id6"],[75,"id8"],[75,"id10"],[75,"id16"]],"Dataset 7":[[75,"dataset-7"],[75,"id7"],[75,"id17"]],"Datasets 1-5 & 7":[[75,"datasets-1-5-7"],[75,"id9"]],"Defining a scaling model":[[4,"defining-a-scaling-model"]],"Delta CC-half":[[76,"delta-cc-half"]],"Details":[[35,"details"]],"Detector distance":[[74,"detector-distance"]],"Determining lattice symmetry":[[74,"determining-lattice-symmetry"]],"Developer Examples":[[5,null]],"Development Builds":[[90,"development-builds"]],"Development Teams":[[0,"development-teams"]],"Dials parameters":[[48,"dials-parameters"]],"Discover a better experimental model":[[78,"discover-a-better-experimental-model"]],"Distl parameters":[[48,"distl-parameters"]],"Documentation":[[8,null]],"Downloading the DIALS regression test data":[[9,"downloading-the-dials-regression-test-data"]],"Entry points":[[4,"entry-points"]],"Example":[[40,"example"]],"Example use cases":[[43,"example-use-cases"]],"Examples use cases":[[72,"examples-use-cases"]],"Excluding bad frames":[[73,"excluding-bad-frames"]],"Experiment list files":[[3,"experiment-list-files"]],"Explorations of Reciprocal Space":[[76,"explorations-of-reciprocal-space"]],"Exploratory analysis":[[74,"exploratory-analysis"]],"Export":[[92,"export"]],"Export the data":[[73,"export-the-data"]],"Exporting":[[87,"exporting"]],"Exporting as MTZ":[[86,"exporting-as-mtz"]],"Exporting to unmerged MTZ":[[82,"exporting-to-unmerged-mtz"],[85,"exporting-to-unmerged-mtz"]],"Extending DIALS":[[4,null]],"Extending dials.index":[[4,"extending-dials-index"]],"Extending dials.scale":[[4,"extending-dials-scale"]],"Extending profile models":[[4,"extending-profile-models"]],"Extensions":[[31,null]],"Feedback":[[79,"feedback"]],"Find Spots":[[78,"find-spots"],[82,"find-spots"],[85,"find-spots"],[86,"find-spots"]],"Find spots":[[73,"find-spots"]],"Find the Bravais lattice (optional)":[[73,"find-the-bravais-lattice-optional"]],"Find the beam centre":[[73,"find-the-beam-centre"]],"Full parameter definitions":[[34,"full-parameter-definitions"],[35,"full-parameter-definitions"],[36,"full-parameter-definitions"],[37,"full-parameter-definitions"],[38,"full-parameter-definitions"],[39,"full-parameter-definitions"],[40,"full-parameter-definitions"],[41,"full-parameter-definitions"],[42,"full-parameter-definitions"],[43,"full-parameter-definitions"],[44,"full-parameter-definitions"],[45,"full-parameter-definitions"],[46,"full-parameter-definitions"],[47,"full-parameter-definitions"],[49,"full-parameter-definitions"],[50,"full-parameter-definitions"],[51,"full-parameter-definitions"],[52,"full-parameter-definitions"],[53,"full-parameter-definitions"],[54,"full-parameter-definitions"],[55,"full-parameter-definitions"],[56,"full-parameter-definitions"],[57,"full-parameter-definitions"],[58,"full-parameter-definitions"],[59,"full-parameter-definitions"],[60,"full-parameter-definitions"],[61,"full-parameter-definitions"],[62,"full-parameter-definitions"],[63,"full-parameter-definitions"],[64,"full-parameter-definitions"],[65,"full-parameter-definitions"],[66,"full-parameter-definitions"],[67,"full-parameter-definitions"],[68,"full-parameter-definitions"],[69,"full-parameter-definitions"],[70,"full-parameter-definitions"],[72,"full-parameter-definitions"]],"Funding":[[89,"funding"]],"Further processing":[[74,"further-processing"]],"Further refinement":[[74,"further-refinement"]],"General":[[79,"general"]],"General Notes":[[73,"general-notes"]],"Generate a mask for the beam center (optional)":[[73,"generate-a-mask-for-the-beam-center-optional"]],"Getting started":[[7,null]],"Goals":[[93,"goals"]],"Guide to common scaling options":[[1,"guide-to-common-scaling-options"]],"HTML report":[[82,"html-report"],[85,"html-report"]],"Import":[[75,"import"],[78,"import"],[82,"import"],[85,"import"],[86,"import"],[87,"import"]],"Import and Spotfinding":[[84,"import-and-spotfinding"]],"Import images":[[73,"import-images"]],"Importing":[[92,"importing"]],"Indexing":[[73,"indexing"],[74,"indexing"],[75,"indexing"],[78,"indexing"],[82,"indexing"],[84,"indexing"],[85,"indexing"],[86,"indexing"],[87,"indexing"]],"Indexing SSX data with dials.ssx_index":[[96,"indexing-ssx-data-with-dials-ssx-index"]],"Indexing with the corrected beam centre":[[78,"indexing-with-the-corrected-beam-centre"]],"Individual processing":[[83,"individual-processing"]],"Inspecting the results":[[86,"inspecting-the-results"]],"Installation":[[7,"installation"],[90,null],[90,"id1"]],"Installation for Developers":[[9,null]],"Integrating SSX data with dials.ssx_integrate":[[96,"integrating-ssx-data-with-dials-ssx-integrate"]],"Integration":[[73,"integration"],[74,"integration"],[75,"integration"],[82,"integration"],[85,"integration"],[86,"integration"],[87,"integration"]],"Intensity Clustering":[[76,"intensity-clustering"]],"Introduction":[[34,"introduction"],[35,"introduction"],[36,"introduction"],[37,"introduction"],[38,"introduction"],[39,"introduction"],[40,"introduction"],[41,"introduction"],[42,"introduction"],[43,"introduction"],[44,"introduction"],[45,"introduction"],[46,"introduction"],[47,"introduction"],[48,"introduction"],[49,"introduction"],[50,"introduction"],[51,"introduction"],[52,"introduction"],[53,"introduction"],[54,"introduction"],[55,"introduction"],[56,"introduction"],[57,"introduction"],[58,"introduction"],[59,"introduction"],[60,"introduction"],[61,"introduction"],[62,"introduction"],[63,"introduction"],[64,"introduction"],[65,"introduction"],[66,"introduction"],[67,"introduction"],[68,"introduction"],[69,"introduction"],[70,"introduction"],[72,"introduction"],[74,"introduction"],[75,"introduction"],[76,"introduction"],[77,"introduction"],[78,"introduction"],[81,"introduction"],[82,"introduction"],[83,"introduction"],[84,"introduction"],[85,"introduction"],[86,"introduction"],[87,"introduction"]],"Joint refinement":[[83,"joint-refinement"]],"Keeping a Development Environment current":[[9,"keeping-a-development-environment-current"]],"Lattice search strategies":[[4,"lattice-search-strategies"]],"Library Reference":[[32,null]],"Lysozyme nanocrystals":[[75,null]],"Mac and Linux binary installers":[[90,"mac-and-linux-binary-installers"]],"Mac graphical binary installers":[[90,"mac-graphical-binary-installers"]],"ModuleNotFoundError: No module named \u2018gltbx_gl_ext\u2019":[[9,"modulenotfounderror-no-module-named-gltbx-gl-ext"]],"Multi-crystal analysis with DIALS and BLEND: individual vs joint refinement":[[83,null]],"Multi-crystal analysis with DIALS and xia2.multiplex":[[76,null]],"Multi-dataset symmetry determination":[[73,"multi-dataset-symmetry-determination"]],"Multi-lattice Tutorial":[[84,null]],"Multi-tile refinement":[[81,"multi-tile-refinement"]],"MyD88TIR small wedges":[[74,null]],"Next steps":[[7,"next-steps"]],"Note about pedestal and offset":[[73,"note-about-pedestal-and-offset"]],"Organising committee":[[97,"organising-committee"]],"Orientation matrix":[[2,"orientation-matrix"]],"Orthogonalisation convention":[[2,"orthogonalisation-convention"]],"Other datasets":[[73,"other-datasets"]],"Output for SADABS (alternate path)":[[87,"output-for-sadabs-alternate-path"]],"Parameters":[[7,"parameters"]],"Post Experiment Processing":[[76,"post-experiment-processing"]],"Practicalities for large datasets":[[1,"practicalities-for-large-datasets"]],"Preferential Orientation":[[76,"preferential-orientation"]],"Preparing for multi-tile refinement":[[81,"preparing-for-multi-tile-refinement"]],"Process":[[76,"process"]],"Processing Sequences with Missing Images":[[92,null]],"Processing Small Molecule MicroED/3DED: Biotin":[[73,null]],"Processing in Detail":[[85,null]],"Processing in Detail with DUI":[[86,null]],"Program and presentations":[[97,"program-and-presentations"],[98,"program-and-presentations"]],"Program documentation":[[71,null]],"Projects":[[94,null]],"Publications":[[95,null]],"Questioning the lattice symmetry":[[77,"questioning-the-lattice-symmetry"]],"Re-import with the correct beam center":[[73,"re-import-with-the-correct-beam-center"]],"Reading experiment and data":[[6,null]],"Refine the geometry":[[73,"refine-the-geometry"]],"Refinement":[[82,"refinement"],[85,"refinement"],[86,"refinement"],[87,"refinement"],[92,"refinement"]],"Refinement and Integration":[[84,"refinement-and-integration"]],"Refining multi-tile detector metrology with DIALS":[[81,null]],"Refining the detector distance":[[74,"refining-the-detector-distance"]],"Reflection files":[[3,"reflection-files"]],"Resource administration":[[93,"resource-administration"]],"SARS-CoV-2 main protease (Mpro)":[[82,null]],"SSX processing guide":[[96,null]],"Scale the data together":[[73,"scale-the-data-together"]],"Scaling":[[73,"scaling"],[74,"scaling"],[86,"scaling"],[87,"scaling"]],"Scaling against a reference dataset":[[1,"scaling-against-a-reference-dataset"]],"Scaling and Merging":[[82,"scaling-and-merging"],[85,"scaling-and-merging"]],"Scaling and merging":[[75,"scaling-and-merging"]],"Scan-varying refinement":[[75,"scan-varying-refinement"]],"Scripted processing":[[74,"scripted-processing"]],"Sets 0-9":[[76,"sets-0-9"]],"Sets 10-19":[[76,"sets-10-19"]],"Sets 20-29":[[76,"sets-20-29"]],"Setting up a Development Environment on Linux or Mac":[[9,"setting-up-a-development-environment-on-linux-or-mac"]],"Small-molecule data reduction tutorial":[[87,null]],"Software activities":[[93,"software-activities"]],"Solve the structure":[[73,"solve-the-structure"]],"Sourcing the DIALS environment":[[7,"sourcing-the-dials-environment"]],"Spot finding":[[87,"spot-finding"]],"Spot-finding":[[74,"spot-finding"],[75,"spot-finding"]],"Stable Release: DIALS 3.23.0":[[90,"stable-release-dials-3-23-0"]],"Staff":[[93,"staff"]],"Static model refinement":[[75,"static-model-refinement"]],"Summary of coordinate frames":[[2,"summary-of-coordinate-frames"]],"Symmetry Determination":[[87,"symmetry-determination"]],"Symmetry analysis":[[82,"symmetry-analysis"],[85,"symmetry-analysis"]],"Symmetry, Scaling and Merging":[[84,"symmetry-scaling-and-merging"]],"Table of Contents":[[20,"table-of-contents"],[31,"table-of-contents"]],"Testing the server":[[48,"testing-the-server"]],"The DXTBX goniometer model":[[2,"the-dxtbx-goniometer-model"]],"The diffractometer equation":[[2,"the-diffractometer-equation"]],"The laboratory frame":[[2,"the-laboratory-frame"]],"Tilt axis orientation":[[74,"tilt-axis-orientation"]],"Tutorial data":[[82,"tutorial-data"],[85,"tutorial-data"],[86,"tutorial-data"]],"Tutorials":[[80,null]],"US DIALS National Resource":[[93,null]],"Unit Cell Comparisons":[[76,"unit-cell-comparisons"]],"Unit cell refinement":[[87,"unit-cell-refinement"]],"User guide for scaling data with DIALS":[[1,null]],"Using DIALS at Diamond Light Source":[[79,null]],"Using DIALS with xia2":[[79,"using-dials-with-xia2"]],"Util":[[33,null]],"What to do next":[[81,"what-to-do-next"]],"What to do next?":[[83,"what-to-do-next"]],"Workshops":[[99,null]],"Writing a new format class":[[4,"writing-a-new-format-class"]],"dials.algorithms.background":[[10,null]],"dials.algorithms.indexing":[[11,null]],"dials.algorithms.indexing.basis_vector_search":[[11,"module-dials.algorithms.indexing.basis_vector_search"]],"dials.algorithms.indexing.indexer":[[11,"module-dials.algorithms.indexing.indexer"]],"dials.algorithms.indexing.lattice_search":[[11,"module-dials.algorithms.indexing.lattice_search"]],"dials.algorithms.indexing.max_cell":[[11,"module-dials.algorithms.indexing.max_cell"]],"dials.algorithms.indexing.model_evaluation":[[11,"module-dials.algorithms.indexing.model_evaluation"]],"dials.algorithms.indexing.stills_indexer":[[11,"module-dials.algorithms.indexing.stills_indexer"]],"dials.algorithms.integration":[[12,null]],"dials.algorithms.profile_model":[[13,null]],"dials.algorithms.refinement":[[14,null]],"dials.algorithms.scaling":[[15,null]],"dials.algorithms.spot_finding":[[16,null]],"dials.algorithms.spot_prediction":[[17,null]],"dials.algorithms.symmetry":[[18,null]],"dials.algorithms.symmetry.cosym":[[18,"module-dials.algorithms.symmetry.cosym"]],"dials.align_crystal":[[34,null]],"dials.anvil_correction":[[35,null]],"dials.apply_mask":[[36,null]],"dials.check_indexing_symmetry":[[37,null]],"dials.combine_experiments":[[38,null]],"dials.compare_orientation_matrices":[[39,null]],"dials.cosym":[[40,null]],"dials.create_profile_model":[[41,null]],"dials.estimate_gain":[[42,null]],"dials.estimate_resolution":[[43,null]],"dials.export":[[44,null]],"dials.export_bitmaps":[[45,null]],"dials.filter_reflections":[[46,null]],"dials.find_spots":[[47,null]],"dials.find_spots_server/client":[[49,null]],"dials.generate_mask":[[50,null]],"dials.image_viewer":[[51,null]],"dials.import":[[52,null]],"dials.index":[[53,null]],"dials.integrate":[[54,null]],"dials.merge_cbf":[[55,null]],"dials.missing_reflections":[[56,null]],"dials.plot_scan_varying_model":[[57,null]],"dials.predict":[[58,null]],"dials.refine":[[59,null]],"dials.refine_bravais_settings":[[60,null]],"dials.reindex":[[61,null]],"dials.report":[[62,null]],"dials.scale":[[63,null]],"dials.search_beam_position":[[64,null]],"dials.show":[[65,null]],"dials.slice_sequence":[[66,null]],"dials.spot_counts_per_image":[[67,null]],"dials.stereographic_projection":[[68,null]],"dials.symmetry":[[69,null]],"dials.two_theta_refine":[[70,null]],"distl/dials apache server":[[48,null]],"dxtbx":[[27,null]],"dxtbx.imageset":[[26,null]],"dxtbx.model.beam":[[21,null]],"dxtbx.model.crystal":[[22,null]],"dxtbx.model.detector":[[23,null]],"dxtbx.model.experiment_list":[[24,null]],"dxtbx.model.goniometer":[[25,null]],"dxtbx.model.profile":[[28,null]],"dxtbx.model.scan":[[29,null]],"dxtbx.serialize":[[30,null]],"model.model":[[15,"module-dials.algorithms.scaling.model.model"]],"outlier_rejection":[[15,"module-dials.algorithms.scaling.outlier_rejection"]],"understand Static Method":[[4,"understand-static-method"]],"xia2.multiplex":[[72,null]]},"docnames":["about","dials_scale_user_guide","documentation/conventions","documentation/data_files","documentation/developer_examples/extending_dials","documentation/developer_examples/index","documentation/developer_examples/read_experiment_and_data","documentation/getting_started","documentation/index","documentation/installation_developer","documentation/library_reference/algorithms/dials.algorithms.background","documentation/library_reference/algorithms/dials.algorithms.indexing","documentation/library_reference/algorithms/dials.algorithms.integration","documentation/library_reference/algorithms/dials.algorithms.profile_model","documentation/library_reference/algorithms/dials.algorithms.refinement","documentation/library_reference/algorithms/dials.algorithms.scaling","documentation/library_reference/algorithms/dials.algorithms.spot_finding","documentation/library_reference/algorithms/dials.algorithms.spot_prediction","documentation/library_reference/algorithms/dials.algorithms.symmetry","documentation/library_reference/algorithms/index","documentation/library_reference/array_family/index","documentation/library_reference/dxtbx/beam","documentation/library_reference/dxtbx/crystal","documentation/library_reference/dxtbx/detector","documentation/library_reference/dxtbx/experiment_list","documentation/library_reference/dxtbx/goniometer","documentation/library_reference/dxtbx/imageset","documentation/library_reference/dxtbx/index","documentation/library_reference/dxtbx/profile","documentation/library_reference/dxtbx/scan","documentation/library_reference/dxtbx/serialize","documentation/library_reference/extensions/index","documentation/library_reference/index","documentation/library_reference/util/index","documentation/programs/dials_align_crystal","documentation/programs/dials_anvil_correction","documentation/programs/dials_apply_mask","documentation/programs/dials_check_indexing_symmetry","documentation/programs/dials_combine_experiments","documentation/programs/dials_compare_orientation_matrices","documentation/programs/dials_cosym","documentation/programs/dials_create_profile_model","documentation/programs/dials_estimate_gain","documentation/programs/dials_estimate_resolution","documentation/programs/dials_export","documentation/programs/dials_export_bitmaps","documentation/programs/dials_filter_reflections","documentation/programs/dials_find_spots","documentation/programs/dials_find_spots_apache_server","documentation/programs/dials_find_spots_server","documentation/programs/dials_generate_mask","documentation/programs/dials_image_viewer","documentation/programs/dials_import","documentation/programs/dials_index","documentation/programs/dials_integrate","documentation/programs/dials_merge_cbf","documentation/programs/dials_missing_reflections","documentation/programs/dials_plot_scan_varying_model","documentation/programs/dials_predict","documentation/programs/dials_refine","documentation/programs/dials_refine_bravais_settings","documentation/programs/dials_reindex","documentation/programs/dials_report","documentation/programs/dials_scale","documentation/programs/dials_search_beam_position","documentation/programs/dials_show","documentation/programs/dials_slice_sequence","documentation/programs/dials_spot_counts_per_image","documentation/programs/dials_stereographic_projection","documentation/programs/dials_symmetry","documentation/programs/dials_two_theta_refine","documentation/programs/index","documentation/programs/xia2_multiplex","documentation/tutorials/3DED/Biotin","documentation/tutorials/3DED/MyD88","documentation/tutorials/3DED/lysozyme_nanocrystals","documentation/tutorials/br_lyso_multi","documentation/tutorials/centring_vs_pseudocentring","documentation/tutorials/correcting_poor_initial_geometry_tutorial","documentation/tutorials/diamond","documentation/tutorials/index","documentation/tutorials/metrology_corrections","documentation/tutorials/mpro_x0692","documentation/tutorials/multi_crystal_analysis","documentation/tutorials/multi_lattice_tutorial","documentation/tutorials/processing_in_detail_betalactamase","documentation/tutorials/processing_in_detail_betalactamase_dui","documentation/tutorials/small_molecule_tutorial","howto","index","installation","license","missing-images","national_resource","projects","publications","ssx_processing_guide","workshops/DIALS-1","workshops/dials3d","workshops/index"],"envversion":{"sphinx":65,"sphinx.domains.c":3,"sphinx.domains.changeset":1,"sphinx.domains.citation":1,"sphinx.domains.cpp":9,"sphinx.domains.index":1,"sphinx.domains.javascript":3,"sphinx.domains.math":2,"sphinx.domains.python":4,"sphinx.domains.rst":2,"sphinx.domains.std":2,"sphinx.ext.intersphinx":1,"sphinx.ext.viewcode":1},"filenames":["about.rst","dials_scale_user_guide.rst","documentation/conventions.rst","documentation/data_files.rst","documentation/developer_examples/extending_dials.rst","documentation/developer_examples/index.rst","documentation/developer_examples/read_experiment_and_data.rst","documentation/getting_started.rst","documentation/index.rst","documentation/installation_developer.rst","documentation/library_reference/algorithms/dials.algorithms.background.rst","documentation/library_reference/algorithms/dials.algorithms.indexing.rst","documentation/library_reference/algorithms/dials.algorithms.integration.rst","documentation/library_reference/algorithms/dials.algorithms.profile_model.rst","documentation/library_reference/algorithms/dials.algorithms.refinement.rst","documentation/library_reference/algorithms/dials.algorithms.scaling.rst","documentation/library_reference/algorithms/dials.algorithms.spot_finding.rst","documentation/library_reference/algorithms/dials.algorithms.spot_prediction.rst","documentation/library_reference/algorithms/dials.algorithms.symmetry.rst","documentation/library_reference/algorithms/index.rst","documentation/library_reference/array_family/index.rst","documentation/library_reference/dxtbx/beam.rst","documentation/library_reference/dxtbx/crystal.rst","documentation/library_reference/dxtbx/detector.rst","documentation/library_reference/dxtbx/experiment_list.rst","documentation/library_reference/dxtbx/goniometer.rst","documentation/library_reference/dxtbx/imageset.rst","documentation/library_reference/dxtbx/index.rst","documentation/library_reference/dxtbx/profile.rst","documentation/library_reference/dxtbx/scan.rst","documentation/library_reference/dxtbx/serialize.rst","documentation/library_reference/extensions/index.rst","documentation/library_reference/index.rst","documentation/library_reference/util/index.rst","documentation/programs/dials_align_crystal.rst","documentation/programs/dials_anvil_correction.rst","documentation/programs/dials_apply_mask.rst","documentation/programs/dials_check_indexing_symmetry.rst","documentation/programs/dials_combine_experiments.rst","documentation/programs/dials_compare_orientation_matrices.rst","documentation/programs/dials_cosym.rst","documentation/programs/dials_create_profile_model.rst","documentation/programs/dials_estimate_gain.rst","documentation/programs/dials_estimate_resolution.rst","documentation/programs/dials_export.rst","documentation/programs/dials_export_bitmaps.rst","documentation/programs/dials_filter_reflections.rst","documentation/programs/dials_find_spots.rst","documentation/programs/dials_find_spots_apache_server.rst","documentation/programs/dials_find_spots_server.rst","documentation/programs/dials_generate_mask.rst","documentation/programs/dials_image_viewer.rst","documentation/programs/dials_import.rst","documentation/programs/dials_index.rst","documentation/programs/dials_integrate.rst","documentation/programs/dials_merge_cbf.rst","documentation/programs/dials_missing_reflections.rst","documentation/programs/dials_plot_scan_varying_model.rst","documentation/programs/dials_predict.rst","documentation/programs/dials_refine.rst","documentation/programs/dials_refine_bravais_settings.rst","documentation/programs/dials_reindex.rst","documentation/programs/dials_report.rst","documentation/programs/dials_scale.rst","documentation/programs/dials_search_beam_position.rst","documentation/programs/dials_show.rst","documentation/programs/dials_slice_sequence.rst","documentation/programs/dials_spot_counts_per_image.rst","documentation/programs/dials_stereographic_projection.rst","documentation/programs/dials_symmetry.rst","documentation/programs/dials_two_theta_refine.rst","documentation/programs/index.rst","documentation/programs/xia2_multiplex.rst","documentation/tutorials/3DED/Biotin.rst","documentation/tutorials/3DED/MyD88.rst","documentation/tutorials/3DED/lysozyme_nanocrystals.rst","documentation/tutorials/br_lyso_multi.rst","documentation/tutorials/centring_vs_pseudocentring.rst","documentation/tutorials/correcting_poor_initial_geometry_tutorial.rst","documentation/tutorials/diamond.rst","documentation/tutorials/index.rst","documentation/tutorials/metrology_corrections.rst","documentation/tutorials/mpro_x0692.rst","documentation/tutorials/multi_crystal_analysis.rst","documentation/tutorials/multi_lattice_tutorial.rst","documentation/tutorials/processing_in_detail_betalactamase.rst","documentation/tutorials/processing_in_detail_betalactamase_dui.rst","documentation/tutorials/small_molecule_tutorial.rst","howto.rst","index.rst","installation.rst","license.rst","missing-images.rst","national_resource.rst","projects.rst","publications.rst","ssx_processing_guide.rst","workshops/DIALS-1.rst","workshops/dials3d.rst","workshops/index.rst"],"indexentries":{"__init__() (dials.algorithms.background.radialaverage method)":[[10,"dials.algorithms.background.RadialAverage.__init__",false]],"__init__() (dials.algorithms.indexing.assign_indices.assignindicesglobal method)":[[11,"dials.algorithms.indexing.assign_indices.AssignIndicesGlobal.__init__",false]],"__init__() (dials.algorithms.indexing.assign_indices.assignindiceslocal method)":[[11,"dials.algorithms.indexing.assign_indices.AssignIndicesLocal.__init__",false]],"__init__() (dials.algorithms.indexing.assign_indices.assignindicesstrategy method)":[[11,"dials.algorithms.indexing.assign_indices.AssignIndicesStrategy.__init__",false]],"__init__() (dials.algorithms.indexing.basis_vector_search.fft1d method)":[[11,"dials.algorithms.indexing.basis_vector_search.FFT1D.__init__",false]],"__init__() (dials.algorithms.indexing.basis_vector_search.fft3d method)":[[11,"dials.algorithms.indexing.basis_vector_search.FFT3D.__init__",false]],"__init__() (dials.algorithms.indexing.basis_vector_search.optimise.basisvectorminimiser method)":[[11,"dials.algorithms.indexing.basis_vector_search.optimise.BasisVectorMinimiser.__init__",false]],"__init__() (dials.algorithms.indexing.basis_vector_search.optimise.basisvectortarget method)":[[11,"dials.algorithms.indexing.basis_vector_search.optimise.BasisVectorTarget.__init__",false]],"__init__() (dials.algorithms.indexing.basis_vector_search.realspacegridsearch method)":[[11,"dials.algorithms.indexing.basis_vector_search.RealSpaceGridSearch.__init__",false]],"__init__() (dials.algorithms.indexing.basis_vector_search.strategy method)":[[11,"dials.algorithms.indexing.basis_vector_search.Strategy.__init__",false]],"__init__() (dials.algorithms.indexing.indexer.indexer method)":[[11,"dials.algorithms.indexing.indexer.Indexer.__init__",false]],"__init__() (dials.algorithms.indexing.lattice_search.ffbindexer method)":[[11,"dials.algorithms.indexing.lattice_search.FfbIndexer.__init__",false]],"__init__() (dials.algorithms.indexing.lattice_search.lowresspotmatch method)":[[11,"dials.algorithms.indexing.lattice_search.LowResSpotMatch.__init__",false]],"__init__() (dials.algorithms.indexing.lattice_search.pinkindexer method)":[[11,"dials.algorithms.indexing.lattice_search.PinkIndexer.__init__",false]],"__init__() (dials.algorithms.indexing.lattice_search.strategy method)":[[11,"dials.algorithms.indexing.lattice_search.Strategy.__init__",false]],"__init__() (dials.algorithms.indexing.model_evaluation.modelevaluation method)":[[11,"dials.algorithms.indexing.model_evaluation.ModelEvaluation.__init__",false]],"__init__() (dials.algorithms.indexing.model_evaluation.modelrank method)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRank.__init__",false]],"__init__() (dials.algorithms.indexing.model_evaluation.modelrankfilter method)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRankFilter.__init__",false]],"__init__() (dials.algorithms.indexing.model_evaluation.modelrankweighted method)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRankWeighted.__init__",false]],"__init__() (dials.algorithms.indexing.nearest_neighbor.neighboranalysis method)":[[11,"dials.algorithms.indexing.nearest_neighbor.NeighborAnalysis.__init__",false]],"__init__() (dials.algorithms.indexing.stills_indexer.stillsindexer method)":[[11,"dials.algorithms.indexing.stills_indexer.StillsIndexer.__init__",false]],"__init__() (dials.algorithms.indexing.symmetry.symmetryhandler method)":[[11,"dials.algorithms.indexing.symmetry.SymmetryHandler.__init__",false]],"__init__() (dials.algorithms.integration.integrator.executor method)":[[12,"dials.algorithms.integration.integrator.Executor.__init__",false]],"__init__() (dials.algorithms.integration.integrator.integrator method)":[[12,"dials.algorithms.integration.integrator.Integrator.__init__",false]],"__init__() (dials.algorithms.integration.integrator.integrator3dthreaded method)":[[12,"dials.algorithms.integration.integrator.Integrator3DThreaded.__init__",false]],"__init__() (dials.algorithms.integration.integrator.integratorexecutor method)":[[12,"dials.algorithms.integration.integrator.IntegratorExecutor.__init__",false]],"__init__() (dials.algorithms.integration.integrator.joblist method)":[[12,"dials.algorithms.integration.integrator.JobList.__init__",false]],"__init__() (dials.algorithms.integration.integrator.parameters method)":[[12,"dials.algorithms.integration.integrator.Parameters.__init__",false]],"__init__() (dials.algorithms.integration.integrator.parameters.filter method)":[[12,"dials.algorithms.integration.integrator.Parameters.Filter.__init__",false]],"__init__() (dials.algorithms.integration.integrator.parameters.profile method)":[[12,"dials.algorithms.integration.integrator.Parameters.Profile.__init__",false]],"__init__() (dials.algorithms.integration.integrator.parameters.profile.validation method)":[[12,"dials.algorithms.integration.integrator.Parameters.Profile.Validation.__init__",false]],"__init__() (dials.algorithms.integration.integrator.processor2d method)":[[12,"dials.algorithms.integration.integrator.Processor2D.__init__",false]],"__init__() (dials.algorithms.integration.integrator.processor3d method)":[[12,"dials.algorithms.integration.integrator.Processor3D.__init__",false]],"__init__() (dials.algorithms.integration.integrator.processorflat3d method)":[[12,"dials.algorithms.integration.integrator.ProcessorFlat3D.__init__",false]],"__init__() (dials.algorithms.integration.integrator.processorsingle2d method)":[[12,"dials.algorithms.integration.integrator.ProcessorSingle2D.__init__",false]],"__init__() (dials.algorithms.integration.integrator.processorstills method)":[[12,"dials.algorithms.integration.integrator.ProcessorStills.__init__",false]],"__init__() (dials.algorithms.integration.integrator.profilemodellerexecutor method)":[[12,"dials.algorithms.integration.integrator.ProfileModellerExecutor.__init__",false]],"__init__() (dials.algorithms.integration.integrator.profilevalidatorexecutor method)":[[12,"dials.algorithms.integration.integrator.ProfileValidatorExecutor.__init__",false]],"__init__() (dials.algorithms.integration.integrator.reflectionmanager method)":[[12,"dials.algorithms.integration.integrator.ReflectionManager.__init__",false]],"__init__() (dials.algorithms.refinement.engine.adaptlbfgs method)":[[14,"dials.algorithms.refinement.engine.AdaptLbfgs.__init__",false]],"__init__() (dials.algorithms.refinement.engine.adaptlstbx method)":[[14,"dials.algorithms.refinement.engine.AdaptLstbx.__init__",false]],"__init__() (dials.algorithms.refinement.engine.gaussnewtoniterations method)":[[14,"dials.algorithms.refinement.engine.GaussNewtonIterations.__init__",false]],"__init__() (dials.algorithms.refinement.engine.refinery method)":[[14,"dials.algorithms.refinement.engine.Refinery.__init__",false]],"__init__() (dials.algorithms.refinement.refiner.refiner method)":[[14,"dials.algorithms.refinement.refiner.Refiner.__init__",false]],"__init__() (dials.algorithms.refinement.reflection_manager.blockcalculator method)":[[14,"dials.algorithms.refinement.reflection_manager.BlockCalculator.__init__",false]],"__init__() (dials.algorithms.refinement.reflection_manager.lauereflectionmanager method)":[[14,"dials.algorithms.refinement.reflection_manager.LaueReflectionManager.__init__",false]],"__init__() (dials.algorithms.refinement.reflection_manager.reflectionmanager method)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManager.__init__",false]],"__init__() (dials.algorithms.refinement.reflection_manager.tofreflectionmanager method)":[[14,"dials.algorithms.refinement.reflection_manager.TOFReflectionManager.__init__",false]],"__init__() (dials.algorithms.refinement.target.laueleastsquaresresidualwithrmsdcutoff method)":[[14,"dials.algorithms.refinement.target.LaueLeastSquaresResidualWithRmsdCutoff.__init__",false]],"__init__() (dials.algorithms.refinement.target.leastsquarespositionalresidualwithrmsdcutoff method)":[[14,"dials.algorithms.refinement.target.LeastSquaresPositionalResidualWithRmsdCutoff.__init__",false]],"__init__() (dials.algorithms.refinement.target.target method)":[[14,"dials.algorithms.refinement.target.Target.__init__",false]],"__init__() (dials.algorithms.refinement.target_stills.leastsquaresstillsresidualwithrmsdcutoff method)":[[14,"dials.algorithms.refinement.target_stills.LeastSquaresStillsResidualWithRmsdCutoff.__init__",false]],"__init__() (dials.algorithms.refinement.weighting_strategies.constantweightingstrategy method)":[[14,"dials.algorithms.refinement.weighting_strategies.ConstantWeightingStrategy.__init__",false]],"__init__() (dials.algorithms.refinement.weighting_strategies.lauemixedweightingstrategy method)":[[14,"dials.algorithms.refinement.weighting_strategies.LaueMixedWeightingStrategy.__init__",false]],"__init__() (dials.algorithms.refinement.weighting_strategies.lauestatisticalweightingstrategy method)":[[14,"dials.algorithms.refinement.weighting_strategies.LaueStatisticalWeightingStrategy.__init__",false]],"__init__() (dials.algorithms.refinement.weighting_strategies.stillsweightingstrategy method)":[[14,"dials.algorithms.refinement.weighting_strategies.StillsWeightingStrategy.__init__",false]],"__init__() (dials.algorithms.scaling.model.model.arrayscalingmodel method)":[[15,"dials.algorithms.scaling.model.model.ArrayScalingModel.__init__",false]],"__init__() (dials.algorithms.scaling.model.model.dosedecay method)":[[15,"dials.algorithms.scaling.model.model.DoseDecay.__init__",false]],"__init__() (dials.algorithms.scaling.model.model.kbscalingmodel method)":[[15,"dials.algorithms.scaling.model.model.KBScalingModel.__init__",false]],"__init__() (dials.algorithms.scaling.model.model.physicalscalingmodel method)":[[15,"dials.algorithms.scaling.model.model.PhysicalScalingModel.__init__",false]],"__init__() (dials.algorithms.scaling.model.model.scalingmodelbase method)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.__init__",false]],"__init__() (dials.algorithms.scaling.outlier_rejection.normdevoutlierrejection method)":[[15,"dials.algorithms.scaling.outlier_rejection.NormDevOutlierRejection.__init__",false]],"__init__() (dials.algorithms.scaling.outlier_rejection.outlierrejectionbase method)":[[15,"dials.algorithms.scaling.outlier_rejection.OutlierRejectionBase.__init__",false]],"__init__() (dials.algorithms.scaling.outlier_rejection.simplenormdevoutlierrejection method)":[[15,"dials.algorithms.scaling.outlier_rejection.SimpleNormDevOutlierRejection.__init__",false]],"__init__() (dials.algorithms.scaling.outlier_rejection.targetedoutlierrejection method)":[[15,"dials.algorithms.scaling.outlier_rejection.TargetedOutlierRejection.__init__",false]],"__init__() (dials.algorithms.spot_finding.factory.backgroundgradientfilter method)":[[16,"dials.algorithms.spot_finding.factory.BackgroundGradientFilter.__init__",false]],"__init__() (dials.algorithms.spot_finding.factory.filterrunner method)":[[16,"dials.algorithms.spot_finding.factory.FilterRunner.__init__",false]],"__init__() (dials.algorithms.spot_finding.factory.peakcentroiddistancefilter method)":[[16,"dials.algorithms.spot_finding.factory.PeakCentroidDistanceFilter.__init__",false]],"__init__() (dials.algorithms.spot_finding.factory.spotdensityfilter method)":[[16,"dials.algorithms.spot_finding.factory.SpotDensityFilter.__init__",false]],"__init__() (dials.algorithms.spot_finding.finder.extractpixelsfromimage method)":[[16,"dials.algorithms.spot_finding.finder.ExtractPixelsFromImage.__init__",false]],"__init__() (dials.algorithms.spot_finding.finder.extractpixelsfromimage2dnoshoeboxes method)":[[16,"dials.algorithms.spot_finding.finder.ExtractPixelsFromImage2DNoShoeboxes.__init__",false]],"__init__() (dials.algorithms.spot_finding.finder.extractspots method)":[[16,"dials.algorithms.spot_finding.finder.ExtractSpots.__init__",false]],"__init__() (dials.algorithms.spot_finding.finder.extractspotsparalleltask method)":[[16,"dials.algorithms.spot_finding.finder.ExtractSpotsParallelTask.__init__",false]],"__init__() (dials.algorithms.spot_finding.finder.spotfinder method)":[[16,"dials.algorithms.spot_finding.finder.SpotFinder.__init__",false]],"__init__() (dials.algorithms.spot_finding.finder.tofspotfinder method)":[[16,"dials.algorithms.spot_finding.finder.TOFSpotFinder.__init__",false]],"__init__() (dials.algorithms.spot_prediction.reflection_predictor.reflectionpredictor method)":[[17,"dials.algorithms.spot_prediction.reflection_predictor.ReflectionPredictor.__init__",false]],"__init__() (dials.algorithms.symmetry.cosym.cosymanalysis method)":[[18,"dials.algorithms.symmetry.cosym.CosymAnalysis.__init__",false]],"__init__() (dials.algorithms.symmetry.cosym.engine.lbfgs_with_curvs method)":[[18,"dials.algorithms.symmetry.cosym.engine.lbfgs_with_curvs.__init__",false]],"__init__() (dials.algorithms.symmetry.cosym.scoresubgroup method)":[[18,"dials.algorithms.symmetry.cosym.ScoreSubGroup.__init__",false]],"__init__() (dials.algorithms.symmetry.cosym.scoresymmetryelement method)":[[18,"dials.algorithms.symmetry.cosym.ScoreSymmetryElement.__init__",false]],"__init__() (dials.algorithms.symmetry.cosym.symmetryanalysis method)":[[18,"dials.algorithms.symmetry.cosym.SymmetryAnalysis.__init__",false]],"__init__() (dials.algorithms.symmetry.cosym.target.target method)":[[18,"dials.algorithms.symmetry.cosym.target.Target.__init__",false]],"__init__() (dials.algorithms.symmetry.laue_group.correlationcoefficientaccumulator method)":[[18,"dials.algorithms.symmetry.laue_group.CorrelationCoefficientAccumulator.__init__",false]],"__init__() (dials.algorithms.symmetry.laue_group.lauegroupanalysis method)":[[18,"dials.algorithms.symmetry.laue_group.LaueGroupAnalysis.__init__",false]],"__init__() (dials.algorithms.symmetry.laue_group.scorecorrelationcoefficient method)":[[18,"dials.algorithms.symmetry.laue_group.ScoreCorrelationCoefficient.__init__",false]],"__init__() (dials.algorithms.symmetry.laue_group.scoresubgroup method)":[[18,"dials.algorithms.symmetry.laue_group.ScoreSubGroup.__init__",false]],"__init__() (dials.algorithms.symmetry.laue_group.scoresymmetryelement method)":[[18,"dials.algorithms.symmetry.laue_group.ScoreSymmetryElement.__init__",false]],"__init__() (dials.algorithms.symmetry.symmetry_base method)":[[18,"dials.algorithms.symmetry.symmetry_base.__init__",false]],"__init__() (dials.extensions.dispersion_spotfinder_threshold_ext.dispersionspotfinderthresholdext method)":[[31,"dials.extensions.dispersion_spotfinder_threshold_ext.DispersionSpotFinderThresholdExt.__init__",false]],"__init__() (dials.extensions.null_background_ext.nullbackgroundext method)":[[31,"dials.extensions.null_background_ext.NullBackgroundExt.__init__",false]],"__init__() (dials.extensions.simple_background_ext.simplebackgroundext method)":[[31,"dials.extensions.simple_background_ext.SimpleBackgroundExt.__init__",false]],"__init__() (dials.extensions.simple_centroid_ext.simplecentroidext method)":[[31,"dials.extensions.simple_centroid_ext.SimpleCentroidExt.__init__",false]],"__init__() (dials.util.command_line.progressbar method)":[[33,"dials.util.command_line.ProgressBar.__init__",false]],"__init__() (dials.util.command_line.progressbartimer method)":[[33,"dials.util.command_line.ProgressBarTimer.__init__",false]],"__init__() (dials.util.export_mtz.mtzwriterbase method)":[[33,"dials.util.export_mtz.MTZWriterBase.__init__",false]],"__init__() (dials.util.export_mtz.wavelengthgroup method)":[[33,"dials.util.export_mtz.WavelengthGroup.__init__",false]],"__init__() (dials.util.options.argumentparser method)":[[33,"dials.util.options.ArgumentParser.__init__",false]],"__init__() (dials.util.options.argumentparserbase method)":[[33,"dials.util.options.ArgumentParserBase.__init__",false]],"__init__() (dials.util.options.importer method)":[[33,"dials.util.options.Importer.__init__",false]],"__init__() (dials.util.options.optionparser method)":[[33,"dials.util.options.OptionParser.__init__",false]],"__init__() (dials.util.options.philcommandparser method)":[[33,"dials.util.options.PhilCommandParser.__init__",false]],"__init__() (dxtbx.imageset.externallookup method)":[[26,"dxtbx.imageset.ExternalLookup.__init__",false]],"__init__() (dxtbx.imageset.externallookupitembool method)":[[26,"dxtbx.imageset.ExternalLookupItemBool.__init__",false]],"__init__() (dxtbx.imageset.externallookupitemdouble method)":[[26,"dxtbx.imageset.ExternalLookupItemDouble.__init__",false]],"__init__() (dxtbx.imageset.imagegrid method)":[[26,"dxtbx.imageset.ImageGrid.__init__",false]],"__init__() (dxtbx.imageset.imagesequence method)":[[26,"dxtbx.imageset.ImageSequence.__init__",false]],"__init__() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.__init__",false]],"__init__() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.__init__",false]],"__init__() (dxtbx.imageset.memreader method)":[[26,"dxtbx.imageset.MemReader.__init__",false]],"__init__() (dxtbx.model.crystal method)":[[22,"dxtbx.model.Crystal.__init__",false]],"__init__() (dxtbx.model.detector method)":[[23,"dxtbx.model.Detector.__init__",false]],"__init__() (dxtbx.model.experiment_list.beamcomparison method)":[[24,"dxtbx.model.experiment_list.BeamComparison.__init__",false]],"__init__() (dxtbx.model.experiment_list.detectorcomparison method)":[[24,"dxtbx.model.experiment_list.DetectorComparison.__init__",false]],"__init__() (dxtbx.model.experiment_list.goniometercomparison method)":[[24,"dxtbx.model.experiment_list.GoniometerComparison.__init__",false]],"__init__() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.__init__",false]],"__init__() (dxtbx.model.goniometer.goniometer method)":[[25,"dxtbx.model.goniometer.Goniometer.__init__",false]],"__init__() (dxtbx.model.goniometer.kappagoniometer method)":[[25,"dxtbx.model.goniometer.KappaGoniometer.__init__",false]],"__init__() (dxtbx.model.goniometer.multiaxisgoniometer method)":[[25,"dxtbx.model.goniometer.MultiAxisGoniometer.__init__",false]],"__init__() (dxtbx.model.mosaiccrystalkabsch2010 method)":[[22,"dxtbx.model.MosaicCrystalKabsch2010.__init__",false]],"__init__() (dxtbx.model.mosaiccrystalsauter2014 method)":[[22,"dxtbx.model.MosaicCrystalSauter2014.__init__",false]],"__init__() (dxtbx.serialize.xds.to_xds method)":[[30,"dxtbx.serialize.xds.to_xds.__init__",false]],"accumulate() (dials.algorithms.integration.integrator.reflectionmanager method)":[[12,"dials.algorithms.integration.integrator.ReflectionManager.accumulate",false]],"accumulate() (dials.algorithms.symmetry.laue_group.correlationcoefficientaccumulator method)":[[18,"dials.algorithms.symmetry.laue_group.CorrelationCoefficientAccumulator.accumulate",false]],"achieved() (dials.algorithms.refinement.target.laueleastsquaresresidualwithrmsdcutoff method)":[[14,"dials.algorithms.refinement.target.LaueLeastSquaresResidualWithRmsdCutoff.achieved",false]],"achieved() (dials.algorithms.refinement.target.leastsquarespositionalresidualwithrmsdcutoff method)":[[14,"dials.algorithms.refinement.target.LeastSquaresPositionalResidualWithRmsdCutoff.achieved",false]],"achieved() (dials.algorithms.refinement.target.target method)":[[14,"dials.algorithms.refinement.target.Target.achieved",false]],"achieved() (dials.algorithms.refinement.target_stills.leastsquaresstillsresidualwithrmsdcutoff method)":[[14,"dials.algorithms.refinement.target_stills.LeastSquaresStillsResidualWithRmsdCutoff.achieved",false]],"adaptlbfgs (class in dials.algorithms.refinement.engine)":[[14,"dials.algorithms.refinement.engine.AdaptLbfgs",false]],"adaptlstbx (class in dials.algorithms.refinement.engine)":[[14,"dials.algorithms.refinement.engine.AdaptLstbx",false]],"add() (dials.algorithms.background.radialaverage method)":[[10,"dials.algorithms.background.RadialAverage.add",false]],"add() (dials.algorithms.integration.integrator.joblist method)":[[12,"dials.algorithms.integration.integrator.JobList.add",false]],"add() (dxtbx.model.scan.scanfactory static method)":[[29,"dxtbx.model.scan.ScanFactory.add",false]],"add_batch_list() (in module dials.util.export_mtz)":[[33,"dials.util.export_mtz.add_batch_list",false]],"add_column() (dials.algorithms.refinement.engine.journal method)":[[14,"dials.algorithms.refinement.engine.Journal.add_column",false]],"add_constant_to_diagonal() (dials.algorithms.refinement.engine.levenbergmarquardtiterations method)":[[14,"dials.algorithms.refinement.engine.LevenbergMarquardtIterations.add_constant_to_diagonal",false]],"add_crystal() (dials.util.export_mtz.mtzwriterbase method)":[[33,"dials.util.export_mtz.MTZWriterBase.add_crystal",false]],"add_dataset() (dials.util.export_mtz.madmergedmtzwriter method)":[[33,"dials.util.export_mtz.MADMergedMTZWriter.add_dataset",false]],"add_dataset() (dials.util.export_mtz.mergedmtzwriter method)":[[33,"dials.util.export_mtz.MergedMTZWriter.add_dataset",false]],"add_empty_dataset() (dials.util.export_mtz.mtzwriterbase method)":[[33,"dials.util.export_mtz.MTZWriterBase.add_empty_dataset",false]],"add_experiment() (dials.util.export_mtz.wavelengthgroup method)":[[33,"dials.util.export_mtz.WavelengthGroup.add_experiment",false]],"add_group() (dxtbx.model.detector method)":[[23,"dxtbx.model.Detector.add_group",false]],"add_panel() (dxtbx.model.detector method)":[[23,"dxtbx.model.Detector.add_panel",false]],"add_row() (dials.algorithms.refinement.engine.journal method)":[[14,"dials.algorithms.refinement.engine.Journal.add_row",false]],"algorithm() (dials.extensions.gaussian_rs_profile_model_ext.gaussianrsprofilemodelext static method)":[[31,"dials.extensions.gaussian_rs_profile_model_ext.GaussianRSProfileModelExt.algorithm",false]],"all_laue() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.all_laue",false]],"all_rotations() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.all_rotations",false]],"all_same_type() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.all_same_type",false]],"all_sequences() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.all_sequences",false]],"all_stills() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.all_stills",false]],"all_tof() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.all_tof",false]],"append() (dials.algorithms.indexing.model_evaluation.modelrank method)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRank.append",false]],"append() (dials.algorithms.indexing.model_evaluation.modelrankfilter method)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRankFilter.append",false]],"append() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.append",false]],"apply_hkl_offset() (in module dials.algorithms.indexing.indexer)":[[11,"dials.algorithms.indexing.indexer.apply_hkl_offset",false]],"apply_symmetry() (dials.algorithms.indexing.symmetry.symmetryhandler method)":[[11,"dials.algorithms.indexing.symmetry.SymmetryHandler.apply_symmetry",false]],"argumenthandlingerrorinfo (class in dials.util.options)":[[33,"dials.util.options.ArgumentHandlingErrorInfo",false]],"argumentparser (class in dials.util.options)":[[33,"dials.util.options.ArgumentParser",false]],"argumentparserbase (class in dials.util.options)":[[33,"dials.util.options.ArgumentParserBase",false]],"arrayscalingmodel (class in dials.algorithms.scaling.model.model)":[[15,"dials.algorithms.scaling.model.model.ArrayScalingModel",false]],"as_dict() (dials.algorithms.symmetry.cosym.cosymanalysis method)":[[18,"dials.algorithms.symmetry.cosym.CosymAnalysis.as_dict",false]],"as_dict() (dials.algorithms.symmetry.cosym.scoresubgroup method)":[[18,"dials.algorithms.symmetry.cosym.ScoreSubGroup.as_dict",false]],"as_dict() (dials.algorithms.symmetry.cosym.scoresymmetryelement method)":[[18,"dials.algorithms.symmetry.cosym.ScoreSymmetryElement.as_dict",false]],"as_dict() (dials.algorithms.symmetry.cosym.symmetryanalysis method)":[[18,"dials.algorithms.symmetry.cosym.SymmetryAnalysis.as_dict",false]],"as_dict() (dials.algorithms.symmetry.laue_group.lauegroupanalysis method)":[[18,"dials.algorithms.symmetry.laue_group.LaueGroupAnalysis.as_dict",false]],"as_dict() (dials.algorithms.symmetry.laue_group.scoresubgroup method)":[[18,"dials.algorithms.symmetry.laue_group.ScoreSubGroup.as_dict",false]],"as_dict() (dials.algorithms.symmetry.laue_group.scoresymmetryelement method)":[[18,"dials.algorithms.symmetry.laue_group.ScoreSymmetryElement.as_dict",false]],"as_file() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.as_file",false]],"as_imageset() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.as_imageset",false]],"as_json() (dials.algorithms.symmetry.cosym.cosymanalysis method)":[[18,"dials.algorithms.symmetry.cosym.CosymAnalysis.as_json",false]],"as_json() (dials.algorithms.symmetry.laue_group.lauegroupanalysis method)":[[18,"dials.algorithms.symmetry.laue_group.LaueGroupAnalysis.as_json",false]],"as_json() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.as_json",false]],"as_str() (dxtbx.model.crystal method)":[[22,"dxtbx.model.Crystal.as_str",false]],"as_str() (dxtbx.model.mosaiccrystalkabsch2010 method)":[[22,"dxtbx.model.MosaicCrystalKabsch2010.as_str",false]],"as_str() (dxtbx.model.mosaiccrystalsauter2014 method)":[[22,"dxtbx.model.MosaicCrystalSauter2014.as_str",false]],"assignindicesglobal (class in dials.algorithms.indexing.assign_indices)":[[11,"dials.algorithms.indexing.assign_indices.AssignIndicesGlobal",false]],"assignindiceslocal (class in dials.algorithms.indexing.assign_indices)":[[11,"dials.algorithms.indexing.assign_indices.AssignIndicesLocal",false]],"assignindicesstrategy (class in dials.algorithms.indexing.assign_indices)":[[11,"dials.algorithms.indexing.assign_indices.AssignIndicesStrategy",false]],"backgroundgradientfilter (class in dials.algorithms.spot_finding.factory)":[[16,"dials.algorithms.spot_finding.factory.BackgroundGradientFilter",false]],"base_package_options (dials.util.installer.installer attribute)":[[33,"dials.util.installer.installer.base_package_options",false]],"basic_imageset_from_dict() (in module dxtbx.serialize.imageset)":[[30,"dxtbx.serialize.imageset.basic_imageset_from_dict",false]],"basic_imageset_to_dict() (in module dxtbx.serialize.imageset)":[[30,"dxtbx.serialize.imageset.basic_imageset_to_dict",false]],"basisvectorminimiser (class in dials.algorithms.indexing.basis_vector_search.optimise)":[[11,"dials.algorithms.indexing.basis_vector_search.optimise.BasisVectorMinimiser",false]],"basisvectortarget (class in dials.algorithms.indexing.basis_vector_search.optimise)":[[11,"dials.algorithms.indexing.basis_vector_search.optimise.BasisVectorTarget",false]],"beamcomparison (class in dxtbx.model.experiment_list)":[[24,"dxtbx.model.experiment_list.BeamComparison",false]],"beamfactory (class in dxtbx.model.beam)":[[21,"dxtbx.model.beam.BeamFactory",false]],"beams() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.beams",false]],"best_model() (dials.algorithms.indexing.model_evaluation.modelrank method)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRank.best_model",false]],"best_model() (dials.algorithms.indexing.model_evaluation.modelrankfilter method)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRankFilter.best_model",false]],"best_model() (dials.algorithms.indexing.model_evaluation.modelrankweighted method)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRankWeighted.best_model",false]],"blockcalculator (class in dials.algorithms.refinement.reflection_manager)":[[14,"dials.algorithms.refinement.reflection_manager.BlockCalculator",false]],"build_up() (dials.algorithms.refinement.engine.adaptlstbx method)":[[14,"dials.algorithms.refinement.engine.AdaptLstbx.build_up",false]],"calc_2d_rmsd_and_displacements() (in module dials.algorithms.indexing.stills_indexer)":[[11,"dials.algorithms.indexing.stills_indexer.calc_2D_rmsd_and_displacements",false]],"calc_acentric_subgroups() (in module dials.algorithms.indexing.symmetry)":[[11,"dials.algorithms.indexing.symmetry.calc_acentric_subgroups",false]],"calc_exp_rmsd_table() (dials.algorithms.refinement.refiner.refiner method)":[[14,"dials.algorithms.refinement.refiner.Refiner.calc_exp_rmsd_table",false]],"calc_n_param_from_bins() (in module dials.algorithms.scaling.model.model)":[[15,"dials.algorithms.scaling.model.model.calc_n_param_from_bins",false]],"calculate_esds() (dials.algorithms.refinement.engine.adaptlstbx method)":[[14,"dials.algorithms.refinement.engine.AdaptLstbx.calculate_esds",false]],"calculate_gradients() (dials.algorithms.refinement.target.target method)":[[14,"dials.algorithms.refinement.target.Target.calculate_gradients",false]],"calculate_new_offset() (in module dials.algorithms.scaling.model.model)":[[15,"dials.algorithms.scaling.model.model.calculate_new_offset",false]],"calculate_weighted_mean() (dials.util.export_mtz.wavelengthgroup method)":[[33,"dials.util.export_mtz.WavelengthGroup.calculate_weighted_mean",false]],"calculate_weights() (dials.algorithms.refinement.weighting_strategies.constantweightingstrategy method)":[[14,"dials.algorithms.refinement.weighting_strategies.ConstantWeightingStrategy.calculate_weights",false]],"calculate_weights() (dials.algorithms.refinement.weighting_strategies.externaldelpsiweightingstrategy method)":[[14,"dials.algorithms.refinement.weighting_strategies.ExternalDelPsiWeightingStrategy.calculate_weights",false]],"calculate_weights() (dials.algorithms.refinement.weighting_strategies.lauemixedweightingstrategy method)":[[14,"dials.algorithms.refinement.weighting_strategies.LaueMixedWeightingStrategy.calculate_weights",false]],"calculate_weights() (dials.algorithms.refinement.weighting_strategies.lauestatisticalweightingstrategy method)":[[14,"dials.algorithms.refinement.weighting_strategies.LaueStatisticalWeightingStrategy.calculate_weights",false]],"calculate_weights() (dials.algorithms.refinement.weighting_strategies.statisticalweightingstrategy static method)":[[14,"dials.algorithms.refinement.weighting_strategies.StatisticalWeightingStrategy.calculate_weights",false]],"calculate_weights() (dials.algorithms.refinement.weighting_strategies.stillsweightingstrategy method)":[[14,"dials.algorithms.refinement.weighting_strategies.StillsWeightingStrategy.calculate_weights",false]],"callback_after_step() (dials.algorithms.refinement.engine.adaptlbfgs method)":[[14,"dials.algorithms.refinement.engine.AdaptLbfgs.callback_after_step",false]],"callback_after_step() (dials.algorithms.symmetry.cosym.engine.lbfgs_with_curvs method)":[[18,"dials.algorithms.symmetry.cosym.engine.lbfgs_with_curvs.callback_after_step",false]],"candidate_orientation_matrices() (in module dials.algorithms.indexing.basis_vector_search.combinations)":[[11,"dials.algorithms.indexing.basis_vector_search.combinations.candidate_orientation_matrices",false]],"change_basis() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.change_basis",false]],"change_of_basis_op_to_best_cell() (in module dials.algorithms.symmetry.cosym)":[[18,"dials.algorithms.symmetry.cosym.change_of_basis_op_to_best_cell",false]],"check_flags() (dials.algorithms.spot_finding.factory.filterrunner method)":[[16,"dials.algorithms.spot_finding.factory.FilterRunner.check_flags",false]],"choose_best_orientation_matrix() (dials.algorithms.indexing.stills_indexer.stillsindexer method)":[[11,"dials.algorithms.indexing.stills_indexer.StillsIndexer.choose_best_orientation_matrix",false]],"clear() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.clear",false]],"clear_cache() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.clear_cache",false]],"coefficient() (dials.algorithms.symmetry.laue_group.correlationcoefficientaccumulator method)":[[18,"dials.algorithms.symmetry.laue_group.CorrelationCoefficientAccumulator.coefficient",false]],"coloured() (in module dials.util.command_line)":[[33,"dials.util.command_line.coloured",false]],"combined_scores() (dials.algorithms.indexing.model_evaluation.modelrankweighted method)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRankWeighted.combined_scores",false]],"command (class in dials.util.command_line)":[[33,"dials.util.command_line.Command",false]],"complete_set() (dxtbx.imageset.imagesequence method)":[[26,"dxtbx.imageset.ImageSequence.complete_set",false]],"complete_set() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.complete_set",false]],"complex() (dxtbx.model.beam.beamfactory static method)":[[21,"dxtbx.model.beam.BeamFactory.complex",false]],"complex() (dxtbx.model.detector.detectorfactory static method)":[[23,"dxtbx.model.detector.DetectorFactory.complex",false]],"components (dials.algorithms.scaling.model.model.scalingmodelbase property)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.components",false]],"compute_background() (dials.extensions.null_background_ext.nullbackgroundext method)":[[31,"dials.extensions.null_background_ext.NullBackgroundExt.compute_background",false]],"compute_background() (dials.extensions.simple_background_ext.simplebackgroundext method)":[[31,"dials.extensions.simple_background_ext.SimpleBackgroundExt.compute_background",false]],"compute_centroid() (dials.extensions.simple_centroid_ext.simplecentroidext method)":[[31,"dials.extensions.simple_centroid_ext.SimpleCentroidExt.compute_centroid",false]],"compute_functional() (dials.algorithms.indexing.basis_vector_search.optimise.basisvectortarget method)":[[11,"dials.algorithms.indexing.basis_vector_search.optimise.BasisVectorTarget.compute_functional",false]],"compute_functional() (dials.algorithms.indexing.basis_vector_search.realspacegridsearch static method)":[[11,"dials.algorithms.indexing.basis_vector_search.RealSpaceGridSearch.compute_functional",false]],"compute_functional() (dials.algorithms.symmetry.cosym.target.target method)":[[18,"dials.algorithms.symmetry.cosym.target.Target.compute_functional",false]],"compute_functional_and_gradients() (dials.algorithms.indexing.basis_vector_search.optimise.basisvectorminimiser method)":[[11,"dials.algorithms.indexing.basis_vector_search.optimise.BasisVectorMinimiser.compute_functional_and_gradients",false]],"compute_functional_and_gradients() (dials.algorithms.indexing.basis_vector_search.optimise.basisvectortarget method)":[[11,"dials.algorithms.indexing.basis_vector_search.optimise.BasisVectorTarget.compute_functional_and_gradients",false]],"compute_functional_and_gradients() (dials.algorithms.refinement.engine.adaptlbfgs method)":[[14,"dials.algorithms.refinement.engine.AdaptLbfgs.compute_functional_and_gradients",false]],"compute_functional_and_gradients() (dials.algorithms.symmetry.cosym.engine.lbfgs_with_curvs method)":[[18,"dials.algorithms.symmetry.cosym.engine.lbfgs_with_curvs.compute_functional_and_gradients",false]],"compute_functional_gradients_and_curvatures() (dials.algorithms.refinement.engine.adaptlbfgs method)":[[14,"dials.algorithms.refinement.engine.AdaptLbfgs.compute_functional_gradients_and_curvatures",false]],"compute_functional_gradients_and_curvatures() (dials.algorithms.refinement.target.target method)":[[14,"dials.algorithms.refinement.target.Target.compute_functional_gradients_and_curvatures",false]],"compute_functional_gradients_and_curvatures() (dials.algorithms.symmetry.cosym.engine.lbfgs_with_curvs method)":[[18,"dials.algorithms.symmetry.cosym.engine.lbfgs_with_curvs.compute_functional_gradients_and_curvatures",false]],"compute_functional_gradients_diag() (dials.algorithms.refinement.engine.lbfgscurvs method)":[[14,"dials.algorithms.refinement.engine.LBFGScurvs.compute_functional_gradients_diag",false]],"compute_functional_gradients_diag() (dials.algorithms.symmetry.cosym.engine.lbfgs_with_curvs method)":[[18,"dials.algorithms.symmetry.cosym.engine.lbfgs_with_curvs.compute_functional_gradients_diag",false]],"compute_functional_score_for_dimension_assessment() (dials.algorithms.symmetry.cosym.target.target method)":[[18,"dials.algorithms.symmetry.cosym.target.Target.compute_functional_score_for_dimension_assessment",false]],"compute_gradients() (dials.algorithms.symmetry.cosym.target.target method)":[[18,"dials.algorithms.symmetry.cosym.target.Target.compute_gradients",false]],"compute_gradients_fd() (dials.algorithms.symmetry.cosym.target.target method)":[[18,"dials.algorithms.symmetry.cosym.target.Target.compute_gradients_fd",false]],"compute_residuals() (dials.algorithms.refinement.target.target method)":[[14,"dials.algorithms.refinement.target.Target.compute_residuals",false]],"compute_residuals_and_gradients() (dials.algorithms.refinement.target.target method)":[[14,"dials.algorithms.refinement.target.Target.compute_residuals_and_gradients",false]],"compute_restraints_functional_gradients_and_curvatures() (dials.algorithms.refinement.target.target method)":[[14,"dials.algorithms.refinement.target.Target.compute_restraints_functional_gradients_and_curvatures",false]],"compute_restraints_residuals_and_gradients() (dials.algorithms.refinement.target.target method)":[[14,"dials.algorithms.refinement.target.Target.compute_restraints_residuals_and_gradients",false]],"compute_threshold() (dials.extensions.dispersion_spotfinder_threshold_ext.dispersionspotfinderthresholdext method)":[[31,"dials.extensions.dispersion_spotfinder_threshold_ext.DispersionSpotFinderThresholdExt.compute_threshold",false]],"config_refinery() (dials.algorithms.refinement.refiner.refinerfactory static method)":[[14,"dials.algorithms.refinement.refiner.RefinerFactory.config_refinery",false]],"config_restraints() (dials.algorithms.refinement.refiner.refinerfactory static method)":[[14,"dials.algorithms.refinement.refiner.RefinerFactory.config_restraints",false]],"config_sparse() (dials.algorithms.refinement.refiner.refinerfactory static method)":[[14,"dials.algorithms.refinement.refiner.RefinerFactory.config_sparse",false]],"config_target() (dials.algorithms.refinement.refiner.refinerfactory static method)":[[14,"dials.algorithms.refinement.refiner.RefinerFactory.config_target",false]],"configdict (dials.algorithms.scaling.model.model.scalingmodelbase property)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.configdict",false]],"configure_components() (dials.algorithms.scaling.model.model.arrayscalingmodel method)":[[15,"dials.algorithms.scaling.model.model.ArrayScalingModel.configure_components",false]],"configure_components() (dials.algorithms.scaling.model.model.dosedecay method)":[[15,"dials.algorithms.scaling.model.model.DoseDecay.configure_components",false]],"configure_components() (dials.algorithms.scaling.model.model.kbscalingmodel method)":[[15,"dials.algorithms.scaling.model.model.KBScalingModel.configure_components",false]],"configure_components() (dials.algorithms.scaling.model.model.physicalscalingmodel method)":[[15,"dials.algorithms.scaling.model.model.PhysicalScalingModel.configure_components",false]],"configure_components() (dials.algorithms.scaling.model.model.scalingmodelbase method)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.configure_components",false]],"configure_filter() (dials.algorithms.spot_finding.factory.spotfinderfactory static method)":[[16,"dials.algorithms.spot_finding.factory.SpotFinderFactory.configure_filter",false]],"configure_modules (dials.util.installer.installer attribute)":[[33,"dials.util.installer.installer.configure_modules",false]],"configure_threshold() (dials.algorithms.spot_finding.factory.spotfinderfactory static method)":[[16,"dials.algorithms.spot_finding.factory.SpotFinderFactory.configure_threshold",false]],"consecutive_refinement_order (dials.algorithms.scaling.model.model.arrayscalingmodel property)":[[15,"dials.algorithms.scaling.model.model.ArrayScalingModel.consecutive_refinement_order",false]],"consecutive_refinement_order (dials.algorithms.scaling.model.model.dosedecay property)":[[15,"dials.algorithms.scaling.model.model.DoseDecay.consecutive_refinement_order",false]],"consecutive_refinement_order (dials.algorithms.scaling.model.model.kbscalingmodel property)":[[15,"dials.algorithms.scaling.model.model.KBScalingModel.consecutive_refinement_order",false]],"consecutive_refinement_order (dials.algorithms.scaling.model.model.physicalscalingmodel property)":[[15,"dials.algorithms.scaling.model.model.PhysicalScalingModel.consecutive_refinement_order",false]],"consecutive_refinement_order() (dials.algorithms.scaling.model.model.scalingmodelbase method)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.consecutive_refinement_order",false]],"constantweightingstrategy (class in dials.algorithms.refinement.weighting_strategies)":[[14,"dials.algorithms.refinement.weighting_strategies.ConstantWeightingStrategy",false]],"convergence_as_shift_over_esd (dials.algorithms.refinement.engine.gaussnewtoniterations attribute)":[[14,"dials.algorithms.refinement.engine.GaussNewtonIterations.convergence_as_shift_over_esd",false]],"convert_to_cambridge() (in module dials.util.export_mtz)":[[33,"dials.util.export_mtz.convert_to_cambridge",false]],"copy() (dxtbx.imageset.memreader method)":[[26,"dxtbx.imageset.MemReader.copy",false]],"correlationcoefficientaccumulator (class in dials.algorithms.symmetry.laue_group)":[[18,"dials.algorithms.symmetry.laue_group.CorrelationCoefficientAccumulator",false]],"cosymanalysis (class in dials.algorithms.symmetry.cosym)":[[18,"dials.algorithms.symmetry.cosym.CosymAnalysis",false]],"crystal (class in dxtbx.model)":[[22,"dxtbx.model.Crystal",false]],"crystal (dials.algorithms.indexing.model_evaluation.result attribute)":[[11,"dials.algorithms.indexing.model_evaluation.Result.crystal",false]],"crystal() (in module dxtbx.serialize.load)":[[30,"dxtbx.serialize.load.crystal",false]],"crystalfactory (class in dxtbx.model.crystal)":[[22,"dxtbx.model.crystal.CrystalFactory",false]],"crystals() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.crystals",false]],"curvatures() (dials.algorithms.symmetry.cosym.target.target method)":[[18,"dials.algorithms.symmetry.cosym.target.Target.curvatures",false]],"curvatures_fd() (dials.algorithms.symmetry.cosym.target.target method)":[[18,"dials.algorithms.symmetry.cosym.target.Target.curvatures_fd",false]],"damping_value (dials.algorithms.refinement.engine.gaussnewtoniterations attribute)":[[14,"dials.algorithms.refinement.engine.GaussNewtonIterations.damping_value",false]],"data (dxtbx.imageset.externallookupitembool property)":[[26,"dxtbx.imageset.ExternalLookupItemBool.data",false]],"data (dxtbx.imageset.externallookupitemdouble property)":[[26,"dxtbx.imageset.ExternalLookupItemDouble.data",false]],"data() (dials.algorithms.integration.integrator.integratorexecutor method)":[[12,"dials.algorithms.integration.integrator.IntegratorExecutor.data",false]],"data() (dials.algorithms.integration.integrator.profilemodellerexecutor method)":[[12,"dials.algorithms.integration.integrator.ProfileModellerExecutor.data",false]],"data() (dials.algorithms.integration.integrator.profilevalidatorexecutor method)":[[12,"dials.algorithms.integration.integrator.ProfileValidatorExecutor.data",false]],"data() (dials.algorithms.integration.integrator.reflectionmanager method)":[[12,"dials.algorithms.integration.integrator.ReflectionManager.data",false]],"data() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.data",false]],"default (dials.extensions.gaussian_rs_profile_model_ext.gaussianrsprofilemodelext attribute)":[[31,"dials.extensions.gaussian_rs_profile_model_ext.GaussianRSProfileModelExt.default",false]],"default (dials.extensions.simple_centroid_ext.simplecentroidext attribute)":[[31,"dials.extensions.simple_centroid_ext.SimpleCentroidExt.default",false]],"del_last_row() (dials.algorithms.refinement.engine.journal method)":[[14,"dials.algorithms.refinement.engine.Journal.del_last_row",false]],"denominator() (dials.algorithms.symmetry.laue_group.correlationcoefficientaccumulator method)":[[18,"dials.algorithms.symmetry.laue_group.CorrelationCoefficientAccumulator.denominator",false]],"dest_dir_prefix (dials.util.installer.installer attribute)":[[33,"dials.util.installer.installer.dest_dir_prefix",false]],"detector (class in dxtbx.model)":[[23,"dxtbx.model.Detector",false]],"detectorcomparison (class in dxtbx.model.experiment_list)":[[24,"dxtbx.model.experiment_list.DetectorComparison",false]],"detectorfactory (class in dxtbx.model.detector)":[[23,"dxtbx.model.detector.DetectorFactory",false]],"detectors() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.detectors",false]],"determine_auto_absorption_params() (in module dials.algorithms.scaling.model.model)":[[15,"dials.algorithms.scaling.model.model.determine_auto_absorption_params",false]],"determine_esq_outlier_index_arrays() (in module dials.algorithms.scaling.outlier_rejection)":[[15,"dials.algorithms.scaling.outlier_rejection.determine_Esq_outlier_index_arrays",false]],"determine_outlier_index_arrays() (in module dials.algorithms.scaling.outlier_rejection)":[[15,"dials.algorithms.scaling.outlier_rejection.determine_outlier_index_arrays",false]],"determine_reindex_operator_against_reference() (in module dials.algorithms.symmetry.reindex_to_reference)":[[18,"dials.algorithms.symmetry.reindex_to_reference.determine_reindex_operator_against_reference",false]],"dials.algorithms.background":[[10,"module-dials.algorithms.background",false]],"dials.algorithms.indexing":[[11,"module-dials.algorithms.indexing",false]],"dials.algorithms.indexing.assign_indices":[[11,"module-dials.algorithms.indexing.assign_indices",false]],"dials.algorithms.indexing.basis_vector_search":[[11,"module-dials.algorithms.indexing.basis_vector_search",false]],"dials.algorithms.indexing.basis_vector_search.combinations":[[11,"module-dials.algorithms.indexing.basis_vector_search.combinations",false]],"dials.algorithms.indexing.basis_vector_search.optimise":[[11,"module-dials.algorithms.indexing.basis_vector_search.optimise",false]],"dials.algorithms.indexing.compare_orientation_matrices":[[11,"module-dials.algorithms.indexing.compare_orientation_matrices",false]],"dials.algorithms.indexing.indexer":[[11,"module-dials.algorithms.indexing.indexer",false]],"dials.algorithms.indexing.lattice_search":[[11,"module-dials.algorithms.indexing.lattice_search",false]],"dials.algorithms.indexing.max_cell":[[11,"module-dials.algorithms.indexing.max_cell",false]],"dials.algorithms.indexing.model_evaluation":[[11,"module-dials.algorithms.indexing.model_evaluation",false]],"dials.algorithms.indexing.nearest_neighbor":[[11,"module-dials.algorithms.indexing.nearest_neighbor",false]],"dials.algorithms.indexing.refinement":[[11,"module-dials.algorithms.indexing.refinement",false]],"dials.algorithms.indexing.stills_indexer":[[11,"module-dials.algorithms.indexing.stills_indexer",false]],"dials.algorithms.indexing.symmetry":[[11,"module-dials.algorithms.indexing.symmetry",false]],"dials.algorithms.integration.integrator":[[12,"module-dials.algorithms.integration.integrator",false]],"dials.algorithms.profile_model":[[13,"module-dials.algorithms.profile_model",false]],"dials.algorithms.refinement.engine":[[14,"module-dials.algorithms.refinement.engine",false]],"dials.algorithms.refinement.refiner":[[14,"module-dials.algorithms.refinement.refiner",false]],"dials.algorithms.refinement.reflection_manager":[[14,"module-dials.algorithms.refinement.reflection_manager",false]],"dials.algorithms.refinement.target":[[14,"module-dials.algorithms.refinement.target",false]],"dials.algorithms.refinement.target_stills":[[14,"module-dials.algorithms.refinement.target_stills",false]],"dials.algorithms.refinement.weighting_strategies":[[14,"module-dials.algorithms.refinement.weighting_strategies",false]],"dials.algorithms.scaling":[[15,"module-dials.algorithms.scaling",false]],"dials.algorithms.scaling.model.model":[[15,"module-dials.algorithms.scaling.model.model",false]],"dials.algorithms.scaling.outlier_rejection":[[15,"module-dials.algorithms.scaling.outlier_rejection",false]],"dials.algorithms.spot_finding.factory":[[16,"module-dials.algorithms.spot_finding.factory",false]],"dials.algorithms.spot_finding.finder":[[16,"module-dials.algorithms.spot_finding.finder",false]],"dials.algorithms.spot_prediction.reflection_predictor":[[17,"module-dials.algorithms.spot_prediction.reflection_predictor",false]],"dials.algorithms.symmetry":[[18,"module-dials.algorithms.symmetry",false]],"dials.algorithms.symmetry.cosym":[[18,"module-dials.algorithms.symmetry.cosym",false]],"dials.algorithms.symmetry.cosym.engine":[[18,"module-dials.algorithms.symmetry.cosym.engine",false]],"dials.algorithms.symmetry.cosym.target":[[18,"module-dials.algorithms.symmetry.cosym.target",false]],"dials.algorithms.symmetry.laue_group":[[18,"module-dials.algorithms.symmetry.laue_group",false]],"dials.algorithms.symmetry.reindex_to_reference":[[18,"module-dials.algorithms.symmetry.reindex_to_reference",false]],"dials.array_family.flex":[[20,"module-dials.array_family.flex",false]],"dials.extensions.dispersion_spotfinder_threshold_ext":[[31,"module-dials.extensions.dispersion_spotfinder_threshold_ext",false]],"dials.extensions.gaussian_rs_profile_model_ext":[[31,"module-dials.extensions.gaussian_rs_profile_model_ext",false]],"dials.extensions.null_background_ext":[[31,"module-dials.extensions.null_background_ext",false]],"dials.extensions.simple_background_ext":[[31,"module-dials.extensions.simple_background_ext",false]],"dials.extensions.simple_centroid_ext":[[31,"module-dials.extensions.simple_centroid_ext",false]],"dials.util.command_line":[[33,"module-dials.util.command_line",false]],"dials.util.export_mtz":[[33,"module-dials.util.export_mtz",false]],"dials.util.export_text":[[33,"module-dials.util.export_text",false]],"dials.util.image":[[33,"module-dials.util.image",false]],"dials.util.installer":[[33,"module-dials.util.installer",false]],"dials.util.ioutil":[[33,"module-dials.util.ioutil",false]],"dials.util.nexus":[[33,"module-dials.util.nexus",false]],"dials.util.options":[[33,"module-dials.util.options",false]],"dialsindexerror":[[11,"dials.algorithms.indexing.DialsIndexError",false]],"dialsindexrefineerror":[[11,"dials.algorithms.indexing.DialsIndexRefineError",false]],"diff_phil (dials.util.options.argumentparser property)":[[33,"dials.util.options.ArgumentParser.diff_phil",false]],"diff_phil (dials.util.options.philcommandparser property)":[[33,"dials.util.options.PhilCommandParser.diff_phil",false]],"difference_rotation_matrix_axis_angle() (in module dials.algorithms.indexing.compare_orientation_matrices)":[[11,"dials.algorithms.indexing.compare_orientation_matrices.difference_rotation_matrix_axis_angle",false]],"dim (dials.algorithms.refinement.target.target property)":[[14,"dials.algorithms.refinement.target.Target.dim",false]],"dim (dials.algorithms.symmetry.cosym.target.target attribute)":[[18,"dials.algorithms.symmetry.cosym.target.Target.dim",false]],"disablempmixin (class in dials.algorithms.refinement.engine)":[[14,"dials.algorithms.refinement.engine.DisableMPmixin",false]],"dispersionspotfinderthresholdext (class in dials.extensions.dispersion_spotfinder_threshold_ext)":[[31,"dials.extensions.dispersion_spotfinder_threshold_ext.DispersionSpotFinderThresholdExt",false]],"dosedecay (class in dials.algorithms.scaling.model.model)":[[15,"dials.algorithms.scaling.model.model.DoseDecay",false]],"dump() (in module dials.util.nexus)":[[33,"dials.util.nexus.dump",false]],"dx (dxtbx.imageset.externallookup property)":[[26,"dxtbx.imageset.ExternalLookup.dx",false]],"dxtbx.imageset":[[26,"module-dxtbx.imageset",false]],"dxtbx.model.beam":[[21,"module-dxtbx.model.beam",false]],"dxtbx.model.crystal":[[22,"module-dxtbx.model.crystal",false]],"dxtbx.model.detector":[[23,"module-dxtbx.model.detector",false]],"dxtbx.model.experiment_list":[[24,"module-dxtbx.model.experiment_list",false]],"dxtbx.model.goniometer":[[25,"module-dxtbx.model.goniometer",false]],"dxtbx.model.profile":[[28,"module-dxtbx.model.profile",false]],"dxtbx.model.scan":[[29,"module-dxtbx.model.scan",false]],"dxtbx.serialize.imageset":[[30,"module-dxtbx.serialize.imageset",false]],"dxtbx.serialize.load":[[30,"module-dxtbx.serialize.load",false]],"dxtbx.serialize.xds":[[30,"module-dxtbx.serialize.xds",false]],"dy (dxtbx.imageset.externallookup property)":[[26,"dxtbx.imageset.ExternalLookup.dy",false]],"e_refine() (in module dials.algorithms.indexing.stills_indexer)":[[11,"dials.algorithms.indexing.stills_indexer.e_refine",false]],"empty() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.empty",false]],"end() (dials.util.command_line.command class method)":[[33,"dials.util.command_line.Command.end",false]],"error_model (dials.algorithms.scaling.model.model.scalingmodelbase property)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.error_model",false]],"estimate_global_threshold() (in module dials.extensions.dispersion_spotfinder_threshold_ext)":[[31,"dials.extensions.dispersion_spotfinder_threshold_ext.estimate_global_threshold",false]],"evaluate() (dials.algorithms.indexing.model_evaluation.modelevaluation method)":[[11,"dials.algorithms.indexing.model_evaluation.ModelEvaluation.evaluate",false]],"evaluate() (dials.algorithms.indexing.model_evaluation.strategy method)":[[11,"dials.algorithms.indexing.model_evaluation.Strategy.evaluate",false]],"exception (dials.util.options.argumenthandlingerrorinfo attribute)":[[33,"dials.util.options.ArgumentHandlingErrorInfo.exception",false]],"executor (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.Executor",false]],"exp_nos (dials.util.export_mtz.wavelengthgroup attribute)":[[33,"dials.util.export_mtz.WavelengthGroup.exp_nos",false]],"experiment_list() (in module dxtbx.serialize.load)":[[30,"dxtbx.serialize.load.experiment_list",false]],"experiment_list_for_crystal() (dials.algorithms.indexing.stills_indexer.stillsindexer method)":[[11,"dials.algorithms.indexing.stills_indexer.StillsIndexer.experiment_list_for_crystal",false]],"experiment_type (dials.algorithms.refinement.reflection_manager.lauereflectionmanager attribute)":[[14,"dials.algorithms.refinement.reflection_manager.LaueReflectionManager.experiment_type",false]],"experiment_type (dials.algorithms.refinement.reflection_manager.reflectionmanager attribute)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManager.experiment_type",false]],"experiment_type (dials.algorithms.refinement.reflection_manager.stillsreflectionmanager attribute)":[[14,"dials.algorithms.refinement.reflection_manager.StillsReflectionManager.experiment_type",false]],"experimentlist (class in dxtbx.model)":[[24,"dxtbx.model.ExperimentList",false]],"experimentlistfactory (class in dxtbx.model.experiment_list)":[[24,"dxtbx.model.experiment_list.ExperimentListFactory",false]],"export_as_json() (dials.algorithms.indexing.indexer.indexer method)":[[11,"dials.algorithms.indexing.indexer.Indexer.export_as_json",false]],"export_mtz() (in module dials.util.export_mtz)":[[33,"dials.util.export_mtz.export_mtz",false]],"export_reflections() (dials.algorithms.indexing.indexer.indexer method)":[[11,"dials.algorithms.indexing.indexer.Indexer.export_reflections",false]],"export_text() (in module dials.util.export_text)":[[33,"dials.util.export_text.export_text",false]],"extend() (dials.algorithms.indexing.model_evaluation.modelrank method)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRank.extend",false]],"extend() (dials.algorithms.indexing.model_evaluation.modelrankfilter method)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRankFilter.extend",false]],"extend() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.extend",false]],"external_lookup (dxtbx.imageset.imageset property)":[[26,"dxtbx.imageset.ImageSet.external_lookup",false]],"external_lookup (dxtbx.imageset.imagesetdata property)":[[26,"dxtbx.imageset.ImageSetData.external_lookup",false]],"externaldelpsiweightingstrategy (class in dials.algorithms.refinement.weighting_strategies)":[[14,"dials.algorithms.refinement.weighting_strategies.ExternalDelPsiWeightingStrategy",false]],"externallookup (class in dxtbx.imageset)":[[26,"dxtbx.imageset.ExternalLookup",false]],"externallookupitembool (class in dxtbx.imageset)":[[26,"dxtbx.imageset.ExternalLookupItemBool",false]],"externallookupitemdouble (class in dxtbx.imageset)":[[26,"dxtbx.imageset.ExternalLookupItemDouble",false]],"extract_reference_intensities() (in module dials.algorithms.symmetry.cosym)":[[18,"dials.algorithms.symmetry.cosym.extract_reference_intensities",false]],"extractpixelsfromimage (class in dials.algorithms.spot_finding.finder)":[[16,"dials.algorithms.spot_finding.finder.ExtractPixelsFromImage",false]],"extractpixelsfromimage2dnoshoeboxes (class in dials.algorithms.spot_finding.finder)":[[16,"dials.algorithms.spot_finding.finder.ExtractPixelsFromImage2DNoShoeboxes",false]],"extractspots (class in dials.algorithms.spot_finding.finder)":[[16,"dials.algorithms.spot_finding.finder.ExtractSpots",false]],"extractspotsparalleltask (class in dials.algorithms.spot_finding.finder)":[[16,"dials.algorithms.spot_finding.finder.ExtractSpotsParallelTask",false]],"ffbindexer (class in dials.algorithms.indexing.lattice_search)":[[11,"dials.algorithms.indexing.lattice_search.FfbIndexer",false]],"fft1d (class in dials.algorithms.indexing.basis_vector_search)":[[11,"dials.algorithms.indexing.basis_vector_search.FFT1D",false]],"fft3d (class in dials.algorithms.indexing.basis_vector_search)":[[11,"dials.algorithms.indexing.basis_vector_search.FFT3D",false]],"filename (dxtbx.imageset.externallookupitembool property)":[[26,"dxtbx.imageset.ExternalLookupItemBool.filename",false]],"filename (dxtbx.imageset.externallookupitemdouble property)":[[26,"dxtbx.imageset.ExternalLookupItemDouble.filename",false]],"filename_or_none() (in module dxtbx.serialize.imageset)":[[30,"dxtbx.serialize.imageset.filename_or_none",false]],"filename_to_absolute() (in module dxtbx.serialize.imageset)":[[30,"dxtbx.serialize.imageset.filename_to_absolute",false]],"filter_by_likelihood() (dials.algorithms.indexing.model_evaluation.modelrankfilter method)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRankFilter.filter_by_likelihood",false]],"filter_by_n_indexed() (dials.algorithms.indexing.model_evaluation.modelrankfilter method)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRankFilter.filter_by_n_indexed",false]],"filter_by_volume() (dials.algorithms.indexing.model_evaluation.modelrankfilter method)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRankFilter.filter_by_volume",false]],"filter_doubled_cell() (in module dials.algorithms.indexing.model_evaluation)":[[11,"dials.algorithms.indexing.model_evaluation.filter_doubled_cell",false]],"filter_known_symmetry() (in module dials.algorithms.indexing.basis_vector_search.combinations)":[[11,"dials.algorithms.indexing.basis_vector_search.combinations.filter_known_symmetry",false]],"filter_obs() (dials.algorithms.refinement.reflection_manager.reflectionmanager method)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManager.filter_obs",false]],"filter_similar_orientations() (in module dials.algorithms.indexing.basis_vector_search.combinations)":[[11,"dials.algorithms.indexing.basis_vector_search.combinations.filter_similar_orientations",false]],"filterrunner (class in dials.algorithms.spot_finding.factory)":[[16,"dials.algorithms.spot_finding.factory.FilterRunner",false]],"final_outlier_arrays (dials.algorithms.scaling.outlier_rejection.outlierrejectionbase attribute)":[[15,"dials.algorithms.scaling.outlier_rejection.OutlierRejectionBase.final_outlier_arrays",false]],"finalise() (dials.algorithms.integration.integrator.integrator3dthreaded method)":[[12,"dials.algorithms.integration.integrator.Integrator3DThreaded.finalise",false]],"finalise() (dials.algorithms.refinement.reflection_manager.reflectionmanager method)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManager.finalise",false]],"finalize() (dials.algorithms.integration.integrator.integratorexecutor method)":[[12,"dials.algorithms.integration.integrator.IntegratorExecutor.finalize",false]],"finalize() (dials.algorithms.integration.integrator.profilemodellerexecutor method)":[[12,"dials.algorithms.integration.integrator.ProfileModellerExecutor.finalize",false]],"finalize() (dials.algorithms.integration.integrator.profilevalidatorexecutor method)":[[12,"dials.algorithms.integration.integrator.ProfileValidatorExecutor.finalize",false]],"finalize_reflections() (dials.algorithms.integration.integrator.integrator2d static method)":[[12,"dials.algorithms.integration.integrator.Integrator2D.finalize_reflections",false]],"finalize_reflections() (dials.algorithms.integration.integrator.integrator3d static method)":[[12,"dials.algorithms.integration.integrator.Integrator3D.finalize_reflections",false]],"finalize_reflections() (dials.algorithms.integration.integrator.integratorflat3d static method)":[[12,"dials.algorithms.integration.integrator.IntegratorFlat3D.finalize_reflections",false]],"finalize_reflections() (dials.algorithms.integration.integrator.integratorsingle2d static method)":[[12,"dials.algorithms.integration.integrator.IntegratorSingle2D.finalize_reflections",false]],"finalize_reflections() (dials.algorithms.integration.integrator.integratorstills static method)":[[12,"dials.algorithms.integration.integrator.IntegratorStills.finalize_reflections",false]],"find() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.find",false]],"find_basis_vectors() (dials.algorithms.indexing.basis_vector_search.fft1d method)":[[11,"dials.algorithms.indexing.basis_vector_search.FFT1D.find_basis_vectors",false]],"find_basis_vectors() (dials.algorithms.indexing.basis_vector_search.fft3d method)":[[11,"dials.algorithms.indexing.basis_vector_search.FFT3D.find_basis_vectors",false]],"find_basis_vectors() (dials.algorithms.indexing.basis_vector_search.realspacegridsearch method)":[[11,"dials.algorithms.indexing.basis_vector_search.RealSpaceGridSearch.find_basis_vectors",false]],"find_basis_vectors() (dials.algorithms.indexing.basis_vector_search.strategy method)":[[11,"dials.algorithms.indexing.basis_vector_search.Strategy.find_basis_vectors",false]],"find_crystal_models() (dials.algorithms.indexing.lattice_search.ffbindexer method)":[[11,"dials.algorithms.indexing.lattice_search.FfbIndexer.find_crystal_models",false]],"find_crystal_models() (dials.algorithms.indexing.lattice_search.lowresspotmatch method)":[[11,"dials.algorithms.indexing.lattice_search.LowResSpotMatch.find_crystal_models",false]],"find_crystal_models() (dials.algorithms.indexing.lattice_search.pinkindexer method)":[[11,"dials.algorithms.indexing.lattice_search.PinkIndexer.find_crystal_models",false]],"find_crystal_models() (dials.algorithms.indexing.lattice_search.strategy method)":[[11,"dials.algorithms.indexing.lattice_search.Strategy.find_crystal_models",false]],"find_lattices() (dials.algorithms.indexing.indexer.indexer method)":[[11,"dials.algorithms.indexing.indexer.Indexer.find_lattices",false]],"find_matching_symmetry() (in module dials.algorithms.indexing.symmetry)":[[11,"dials.algorithms.indexing.symmetry.find_matching_symmetry",false]],"find_max_cell() (dials.algorithms.indexing.indexer.indexer method)":[[11,"dials.algorithms.indexing.indexer.Indexer.find_max_cell",false]],"find_max_cell() (in module dials.algorithms.indexing.max_cell)":[[11,"dials.algorithms.indexing.max_cell.find_max_cell",false]],"find_spots() (dials.algorithms.spot_finding.finder.spotfinder method)":[[16,"dials.algorithms.spot_finding.finder.SpotFinder.find_spots",false]],"finished() (dials.algorithms.integration.integrator.reflectionmanager method)":[[12,"dials.algorithms.integration.integrator.ReflectionManager.finished",false]],"finished() (dials.util.command_line.progressbar method)":[[33,"dials.util.command_line.ProgressBar.finished",false]],"fit_profiles() (dials.algorithms.integration.integrator.integrator method)":[[12,"dials.algorithms.integration.integrator.Integrator.fit_profiles",false]],"fix_initial_parameter() (dials.algorithms.scaling.model.model.dosedecay method)":[[15,"dials.algorithms.scaling.model.model.DoseDecay.fix_initial_parameter",false]],"fix_initial_parameter() (dials.algorithms.scaling.model.model.physicalscalingmodel method)":[[15,"dials.algorithms.scaling.model.model.PhysicalScalingModel.fix_initial_parameter",false]],"fix_initial_parameter() (dials.algorithms.scaling.model.model.scalingmodelbase method)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.fix_initial_parameter",false]],"fixed_components (dials.algorithms.scaling.model.model.scalingmodelbase property)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.fixed_components",false]],"flatten_experiments() (in module dials.util.options)":[[33,"dials.util.options.flatten_experiments",false]],"flatten_reflections() (in module dials.util.options)":[[33,"dials.util.options.flatten_reflections",false]],"format_epilog() (dials.util.options.argumentparserbase method)":[[33,"dials.util.options.ArgumentParserBase.format_epilog",false]],"format_help() (dials.util.options.argumentparser method)":[[33,"dials.util.options.ArgumentParser.format_help",false]],"fraction_indexed (dials.algorithms.indexing.model_evaluation.result attribute)":[[11,"dials.algorithms.indexing.model_evaluation.Result.fraction_indexed",false]],"frame_hist() (in module dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.frame_hist",false]],"from_args() (dxtbx.model.experiment_list.experimentlistfactory static method)":[[24,"dxtbx.model.experiment_list.ExperimentListFactory.from_args",false]],"from_data() (dials.algorithms.scaling.model.model.arrayscalingmodel class method)":[[15,"dials.algorithms.scaling.model.model.ArrayScalingModel.from_data",false]],"from_data() (dials.algorithms.scaling.model.model.dosedecay class method)":[[15,"dials.algorithms.scaling.model.model.DoseDecay.from_data",false]],"from_data() (dials.algorithms.scaling.model.model.kbscalingmodel class method)":[[15,"dials.algorithms.scaling.model.model.KBScalingModel.from_data",false]],"from_data() (dials.algorithms.scaling.model.model.physicalscalingmodel class method)":[[15,"dials.algorithms.scaling.model.model.PhysicalScalingModel.from_data",false]],"from_data() (dials.algorithms.scaling.model.model.scalingmodelbase class method)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.from_data",false]],"from_dict() (dials.algorithms.scaling.model.model.arrayscalingmodel class method)":[[15,"dials.algorithms.scaling.model.model.ArrayScalingModel.from_dict",false]],"from_dict() (dials.algorithms.scaling.model.model.dosedecay class method)":[[15,"dials.algorithms.scaling.model.model.DoseDecay.from_dict",false]],"from_dict() (dials.algorithms.scaling.model.model.kbscalingmodel class method)":[[15,"dials.algorithms.scaling.model.model.KBScalingModel.from_dict",false]],"from_dict() (dials.algorithms.scaling.model.model.physicalscalingmodel class method)":[[15,"dials.algorithms.scaling.model.model.PhysicalScalingModel.from_dict",false]],"from_dict() (dials.algorithms.scaling.model.model.scalingmodelbase class method)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.from_dict",false]],"from_dict() (dials.extensions.gaussian_rs_profile_model_ext.gaussianrsprofilemodelext class method)":[[31,"dials.extensions.gaussian_rs_profile_model_ext.GaussianRSProfileModelExt.from_dict",false]],"from_dict() (dxtbx.model.beam.beamfactory static method)":[[21,"dxtbx.model.beam.BeamFactory.from_dict",false]],"from_dict() (dxtbx.model.crystal static method)":[[22,"dxtbx.model.Crystal.from_dict",false]],"from_dict() (dxtbx.model.crystal.crystalfactory static method)":[[22,"dxtbx.model.crystal.CrystalFactory.from_dict",false]],"from_dict() (dxtbx.model.detector static method)":[[23,"dxtbx.model.Detector.from_dict",false]],"from_dict() (dxtbx.model.detector.detectorfactory static method)":[[23,"dxtbx.model.detector.DetectorFactory.from_dict",false]],"from_dict() (dxtbx.model.experiment_list.experimentlistfactory static method)":[[24,"dxtbx.model.experiment_list.ExperimentListFactory.from_dict",false]],"from_dict() (dxtbx.model.goniometer.goniometer static method)":[[25,"dxtbx.model.goniometer.Goniometer.from_dict",false]],"from_dict() (dxtbx.model.goniometer.goniometerfactory static method)":[[25,"dxtbx.model.goniometer.GoniometerFactory.from_dict",false]],"from_dict() (dxtbx.model.goniometer.multiaxisgoniometer static method)":[[25,"dxtbx.model.goniometer.MultiAxisGoniometer.from_dict",false]],"from_dict() (dxtbx.model.mosaiccrystalkabsch2010 class method)":[[22,"dxtbx.model.MosaicCrystalKabsch2010.from_dict",false]],"from_dict() (dxtbx.model.mosaiccrystalsauter2014 class method)":[[22,"dxtbx.model.MosaicCrystalSauter2014.from_dict",false]],"from_dict() (dxtbx.model.profile.profilemodelfactory static method)":[[28,"dxtbx.model.profile.ProfileModelFactory.from_dict",false]],"from_dict() (dxtbx.model.scan.scanfactory static method)":[[29,"dxtbx.model.scan.ScanFactory.from_dict",false]],"from_file() (dxtbx.model.experimentlist static method)":[[24,"dxtbx.model.ExperimentList.from_file",false]],"from_filenames() (dxtbx.model.experiment_list.experimentlistfactory static method)":[[24,"dxtbx.model.experiment_list.ExperimentListFactory.from_filenames",false]],"from_imageset() (dxtbx.imageset.imagegrid static method)":[[26,"dxtbx.imageset.ImageGrid.from_imageset",false]],"from_imageset_and_crystal() (dxtbx.model.experiment_list.experimentlistfactory static method)":[[24,"dxtbx.model.experiment_list.ExperimentListFactory.from_imageset_and_crystal",false]],"from_json() (dxtbx.model.experiment_list.experimentlistfactory static method)":[[24,"dxtbx.model.experiment_list.ExperimentListFactory.from_json",false]],"from_json_file() (dials.algorithms.refinement.engine.journal class method)":[[14,"dials.algorithms.refinement.engine.Journal.from_json_file",false]],"from_json_file() (dxtbx.model.experiment_list.experimentlistfactory static method)":[[24,"dxtbx.model.experiment_list.ExperimentListFactory.from_json_file",false]],"from_mosflm_matrix() (dxtbx.model.crystal.crystalfactory static method)":[[22,"dxtbx.model.crystal.CrystalFactory.from_mosflm_matrix",false]],"from_parameters() (dials.algorithms.indexing.indexer.indexer static method)":[[11,"dials.algorithms.indexing.indexer.Indexer.from_parameters",false]],"from_parameters() (dials.algorithms.spot_finding.factory.spotfinderfactory static method)":[[16,"dials.algorithms.spot_finding.factory.SpotFinderFactory.from_parameters",false]],"from_parameters_and_experiments() (dials.algorithms.refinement.target.targetfactory static method)":[[14,"dials.algorithms.refinement.target.TargetFactory.from_parameters_and_experiments",false]],"from_parameters_data_experiments() (dials.algorithms.refinement.refiner.refinerfactory class method)":[[14,"dials.algorithms.refinement.refiner.RefinerFactory.from_parameters_data_experiments",false]],"from_parameters_reflections_experiments() (dials.algorithms.refinement.reflection_manager.reflectionmanagerfactory static method)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManagerFactory.from_parameters_reflections_experiments",false]],"from_phil() (dials.algorithms.integration.integrator.parameters static method)":[[12,"dials.algorithms.integration.integrator.Parameters.from_phil",false]],"from_phil() (dxtbx.model.beam.beamfactory static method)":[[21,"dxtbx.model.beam.BeamFactory.from_phil",false]],"from_phil() (dxtbx.model.detector.detectorfactory static method)":[[23,"dxtbx.model.detector.DetectorFactory.from_phil",false]],"from_phil() (dxtbx.model.goniometer.goniometerfactory static method)":[[25,"dxtbx.model.goniometer.GoniometerFactory.from_phil",false]],"from_phil() (dxtbx.model.scan.scanfactory static method)":[[29,"dxtbx.model.scan.ScanFactory.from_phil",false]],"from_pickle_file() (dxtbx.model.experiment_list.experimentlistfactory static method)":[[24,"dxtbx.model.experiment_list.ExperimentListFactory.from_pickle_file",false]],"from_sequence_and_crystal() (dxtbx.model.experiment_list.experimentlistfactory static method)":[[24,"dxtbx.model.experiment_list.ExperimentListFactory.from_sequence_and_crystal",false]],"from_serialized_format() (dxtbx.model.experiment_list.experimentlistfactory static method)":[[24,"dxtbx.model.experiment_list.ExperimentListFactory.from_serialized_format",false]],"from_stills_and_crystal() (dxtbx.model.experiment_list.experimentlistfactory static method)":[[24,"dxtbx.model.experiment_list.ExperimentListFactory.from_stills_and_crystal",false]],"from_template() (dxtbx.imageset.imagesetfactory static method)":[[26,"dxtbx.imageset.ImageSetFactory.from_template",false]],"from_templates() (dxtbx.model.experiment_list.experimentlistfactory static method)":[[24,"dxtbx.model.experiment_list.ExperimentListFactory.from_templates",false]],"from_templates() (dxtbx.model.experimentlist static method)":[[24,"dxtbx.model.ExperimentList.from_templates",false]],"from_xds() (dxtbx.model.experiment_list.experimentlistfactory static method)":[[24,"dxtbx.model.experiment_list.ExperimentListFactory.from_xds",false]],"gain (dxtbx.imageset.externallookup property)":[[26,"dxtbx.imageset.ExternalLookup.gain",false]],"gaussianrsprofilemodelext (class in dials.extensions.gaussian_rs_profile_model_ext)":[[31,"dials.extensions.gaussian_rs_profile_model_ext.GaussianRSProfileModelExt",false]],"gaussnewtoniterations (class in dials.algorithms.refinement.engine)":[[14,"dials.algorithms.refinement.engine.GaussNewtonIterations",false]],"generate_from_phil() (dxtbx.model.detector.detectorfactory static method)":[[23,"dxtbx.model.detector.DetectorFactory.generate_from_phil",false]],"generate_phil_scope() (in module dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.generate_phil_scope",false]],"generate_phil_scope() (in module dials.algorithms.spot_finding.factory)":[[16,"dials.algorithms.spot_finding.factory.generate_phil_scope",false]],"get_a_as_sqr() (dxtbx.model.mosaiccrystalsauter2014 method)":[[22,"dxtbx.model.MosaicCrystalSauter2014.get_A_as_sqr",false]],"get_a_inverse_as_sqr() (dxtbx.model.mosaiccrystalsauter2014 method)":[[22,"dxtbx.model.MosaicCrystalSauter2014.get_A_inverse_as_sqr",false]],"get_accepted_refs_size() (dials.algorithms.refinement.reflection_manager.reflectionmanager method)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManager.get_accepted_refs_size",false]],"get_alpha_angle() (dxtbx.model.goniometer.kappagoniometer method)":[[25,"dxtbx.model.goniometer.KappaGoniometer.get_alpha_angle",false]],"get_angles() (dxtbx.model.goniometer.multiaxisgoniometer method)":[[25,"dxtbx.model.goniometer.MultiAxisGoniometer.get_angles",false]],"get_array_range() (dxtbx.imageset.imagesequence method)":[[26,"dxtbx.imageset.ImageSequence.get_array_range",false]],"get_axes() (dxtbx.model.goniometer.multiaxisgoniometer method)":[[25,"dxtbx.model.goniometer.MultiAxisGoniometer.get_axes",false]],"get_beam() (dxtbx.imageset.imagesequence method)":[[26,"dxtbx.imageset.ImageSequence.get_beam",false]],"get_beam() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.get_beam",false]],"get_beam() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.get_beam",false]],"get_beam() (dxtbx.imageset.imagesetlazy method)":[[26,"dxtbx.imageset.ImageSetLazy.get_beam",false]],"get_beam() (dxtbx.serialize.xds.to_xds method)":[[30,"dxtbx.serialize.xds.to_xds.get_beam",false]],"get_centroid_analyser() (dials.algorithms.refinement.reflection_manager.reflectionmanager method)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManager.get_centroid_analyser",false]],"get_corrected_data() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.get_corrected_data",false]],"get_corrected_data() (dxtbx.imageset.imagesetlazy method)":[[26,"dxtbx.imageset.ImageSetLazy.get_corrected_data",false]],"get_correlation_matrix_for_step() (dials.algorithms.refinement.engine.refinery method)":[[14,"dials.algorithms.refinement.engine.Refinery.get_correlation_matrix_for_step",false]],"get_crystal_symmetry() (dxtbx.model.crystal method)":[[22,"dxtbx.model.Crystal.get_crystal_symmetry",false]],"get_data() (dials.util.image.reader method)":[[33,"dials.util.image.reader.get_data",false]],"get_data() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.get_data",false]],"get_detector() (dxtbx.imageset.imagesequence method)":[[26,"dxtbx.imageset.ImageSequence.get_detector",false]],"get_detector() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.get_detector",false]],"get_detector() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.get_detector",false]],"get_detector() (dxtbx.imageset.imagesetlazy method)":[[26,"dxtbx.imageset.ImageSetLazy.get_detector",false]],"get_detector() (dxtbx.serialize.xds.to_xds method)":[[30,"dxtbx.serialize.xds.to_xds.get_detector",false]],"get_detectorbase() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.get_detectorbase",false]],"get_direction() (dxtbx.model.goniometer.kappagoniometer method)":[[25,"dxtbx.model.goniometer.KappaGoniometer.get_direction",false]],"get_domain_size_ang() (dxtbx.model.mosaiccrystalsauter2014 method)":[[22,"dxtbx.model.MosaicCrystalSauter2014.get_domain_size_ang",false]],"get_elapsed_time() (dials.util.command_line.progressbartimer method)":[[33,"dials.util.command_line.ProgressBarTimer.get_elapsed_time",false]],"get_entry() (in module dials.util.nexus)":[[33,"dials.util.nexus.get_entry",false]],"get_experiments() (dials.algorithms.refinement.refiner.refiner method)":[[14,"dials.algorithms.refinement.refiner.Refiner.get_experiments",false]],"get_fixed_rotation() (dxtbx.model.goniometer.goniometer method)":[[25,"dxtbx.model.goniometer.Goniometer.get_fixed_rotation",false]],"get_format_class() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.get_format_class",false]],"get_format_class() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.get_format_class",false]],"get_free_reflections() (dials.algorithms.refinement.refiner.refiner method)":[[14,"dials.algorithms.refinement.refiner.Refiner.get_free_reflections",false]],"get_free_reflections() (dials.algorithms.refinement.reflection_manager.reflectionmanager method)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManager.get_free_reflections",false]],"get_gain() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.get_gain",false]],"get_gain() (dxtbx.imageset.imagesetlazy method)":[[26,"dxtbx.imageset.ImageSetLazy.get_gain",false]],"get_goniometer() (dxtbx.imageset.imagesequence method)":[[26,"dxtbx.imageset.ImageSequence.get_goniometer",false]],"get_goniometer() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.get_goniometer",false]],"get_goniometer() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.get_goniometer",false]],"get_goniometer() (dxtbx.imageset.imagesetlazy method)":[[26,"dxtbx.imageset.ImageSetLazy.get_goniometer",false]],"get_goniometer() (dxtbx.serialize.xds.to_xds method)":[[30,"dxtbx.serialize.xds.to_xds.get_goniometer",false]],"get_grid_size() (dxtbx.imageset.imagegrid method)":[[26,"dxtbx.imageset.ImageGrid.get_grid_size",false]],"get_half_mosaicity_deg() (dxtbx.model.mosaiccrystalsauter2014 method)":[[22,"dxtbx.model.MosaicCrystalSauter2014.get_half_mosaicity_deg",false]],"get_image_identifier() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.get_image_identifier",false]],"get_image_identifier() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.get_image_identifier",false]],"get_indexed() (dials.algorithms.refinement.reflection_manager.reflectionmanager method)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManager.get_indexed",false]],"get_inverse_ub_matrix_from_xparm() (in module dials.util.ioutil)":[[33,"dials.util.ioutil.get_inverse_ub_matrix_from_xparm",false]],"get_kappa_angle() (dxtbx.model.goniometer.kappagoniometer method)":[[25,"dxtbx.model.goniometer.KappaGoniometer.get_kappa_angle",false]],"get_kappa_axis() (dxtbx.model.goniometer.kappagoniometer method)":[[25,"dxtbx.model.goniometer.KappaGoniometer.get_kappa_axis",false]],"get_mask() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.get_mask",false]],"get_mask() (dxtbx.imageset.imagesetlazy method)":[[26,"dxtbx.imageset.ImageSetLazy.get_mask",false]],"get_master_path() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.get_master_path",false]],"get_matches() (dials.algorithms.refinement.refiner.refiner method)":[[14,"dials.algorithms.refinement.refiner.Refiner.get_matches",false]],"get_matches() (dials.algorithms.refinement.reflection_manager.reflectionmanager method)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManager.get_matches",false]],"get_max_inscribed_resolution() (dxtbx.model.detector method)":[[23,"dxtbx.model.Detector.get_max_inscribed_resolution",false]],"get_max_resolution() (dxtbx.model.detector method)":[[23,"dxtbx.model.Detector.get_max_resolution",false]],"get_mosaicity() (dxtbx.model.mosaiccrystalkabsch2010 method)":[[22,"dxtbx.model.MosaicCrystalKabsch2010.get_mosaicity",false]],"get_names() (dxtbx.model.detector method)":[[23,"dxtbx.model.Detector.get_names",false]],"get_names() (dxtbx.model.goniometer.multiaxisgoniometer method)":[[25,"dxtbx.model.goniometer.MultiAxisGoniometer.get_names",false]],"get_nrows() (dials.algorithms.refinement.engine.journal method)":[[14,"dials.algorithms.refinement.engine.Journal.get_nrows",false]],"get_num_matches() (dials.algorithms.refinement.target.target method)":[[14,"dials.algorithms.refinement.target.Target.get_num_matches",false]],"get_num_matches_for_experiment() (dials.algorithms.refinement.target.target method)":[[14,"dials.algorithms.refinement.target.Target.get_num_matches_for_experiment",false]],"get_num_matches_for_panel() (dials.algorithms.refinement.target.target method)":[[14,"dials.algorithms.refinement.target.Target.get_num_matches_for_panel",false]],"get_num_scan_points() (dxtbx.model.goniometer.goniometer method)":[[25,"dxtbx.model.goniometer.Goniometer.get_num_scan_points",false]],"get_num_steps() (dials.algorithms.refinement.engine.refinery method)":[[14,"dials.algorithms.refinement.engine.Refinery.get_num_steps",false]],"get_obs() (dials.algorithms.refinement.reflection_manager.reflectionmanager method)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManager.get_obs",false]],"get_omega_angle() (dxtbx.model.goniometer.kappagoniometer method)":[[25,"dxtbx.model.goniometer.KappaGoniometer.get_omega_angle",false]],"get_omega_axis() (dxtbx.model.goniometer.kappagoniometer method)":[[25,"dxtbx.model.goniometer.KappaGoniometer.get_omega_axis",false]],"get_panel_intersection() (dxtbx.model.detector method)":[[23,"dxtbx.model.Detector.get_panel_intersection",false]],"get_param_reporter() (dials.algorithms.refinement.refiner.refiner method)":[[14,"dials.algorithms.refinement.refiner.Refiner.get_param_reporter",false]],"get_parameter_correlation_matrix() (dials.algorithms.refinement.refiner.refiner method)":[[14,"dials.algorithms.refinement.refiner.Refiner.get_parameter_correlation_matrix",false]],"get_params() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.get_params",false]],"get_path() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.get_path",false]],"get_path() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.get_path",false]],"get_pedestal() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.get_pedestal",false]],"get_phi_angle() (dxtbx.model.goniometer.kappagoniometer method)":[[25,"dxtbx.model.goniometer.KappaGoniometer.get_phi_angle",false]],"get_phi_axis() (dxtbx.model.goniometer.kappagoniometer method)":[[25,"dxtbx.model.goniometer.KappaGoniometer.get_phi_axis",false]],"get_raw_data() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.get_raw_data",false]],"get_ray_intersection() (dxtbx.model.detector method)":[[23,"dxtbx.model.Detector.get_ray_intersection",false]],"get_rotation_axis() (dxtbx.model.goniometer.goniometer method)":[[25,"dxtbx.model.goniometer.Goniometer.get_rotation_axis",false]],"get_rotation_axis_datum() (dxtbx.model.goniometer.goniometer method)":[[25,"dxtbx.model.goniometer.Goniometer.get_rotation_axis_datum",false]],"get_sample_size() (dials.algorithms.refinement.reflection_manager.reflectionmanager method)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManager.get_sample_size",false]],"get_scan() (dxtbx.imageset.imagesequence method)":[[26,"dxtbx.imageset.ImageSequence.get_scan",false]],"get_scan() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.get_scan",false]],"get_scan() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.get_scan",false]],"get_scan() (dxtbx.imageset.imagesetlazy method)":[[26,"dxtbx.imageset.ImageSetLazy.get_scan",false]],"get_scan() (dxtbx.serialize.xds.to_xds method)":[[30,"dxtbx.serialize.xds.to_xds.get_scan",false]],"get_scan_axis() (dxtbx.model.goniometer.kappagoniometer method)":[[25,"dxtbx.model.goniometer.KappaGoniometer.get_scan_axis",false]],"get_scan_axis() (dxtbx.model.goniometer.multiaxisgoniometer method)":[[25,"dxtbx.model.goniometer.MultiAxisGoniometer.get_scan_axis",false]],"get_setting_rotation() (dxtbx.model.goniometer.goniometer method)":[[25,"dxtbx.model.goniometer.Goniometer.get_setting_rotation",false]],"get_setting_rotation_at_scan_point() (dxtbx.model.goniometer.goniometer method)":[[25,"dxtbx.model.goniometer.Goniometer.get_setting_rotation_at_scan_point",false]],"get_setting_rotation_at_scan_points() (dxtbx.model.goniometer.goniometer method)":[[25,"dxtbx.model.goniometer.Goniometer.get_setting_rotation_at_scan_points",false]],"get_shared_components() (dials.algorithms.scaling.model.model.dosedecay method)":[[15,"dials.algorithms.scaling.model.model.DoseDecay.get_shared_components",false]],"get_shared_components() (dials.algorithms.scaling.model.model.physicalscalingmodel method)":[[15,"dials.algorithms.scaling.model.model.PhysicalScalingModel.get_shared_components",false]],"get_shared_components() (dials.algorithms.scaling.model.model.scalingmodelbase method)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.get_shared_components",false]],"get_space_group_type_from_xparm() (in module dials.util.ioutil)":[[33,"dials.util.ioutil.get_space_group_type_from_xparm",false]],"get_spectrum() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.get_spectrum",false]],"get_template() (dxtbx.imageset.imagesequence method)":[[26,"dxtbx.imageset.ImageSequence.get_template",false]],"get_template() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.get_template",false]],"get_template() (dxtbx.serialize.xds.to_xds method)":[[30,"dxtbx.serialize.xds.to_xds.get_template",false]],"get_vendor() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.get_vendor",false]],"get_vendortype() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.get_vendortype",false]],"get_weighting_strategy_override() (dials.algorithms.refinement.reflection_manager.reflectionmanagerfactory static method)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManagerFactory.get_weighting_strategy_override",false]],"goniometer (class in dxtbx.model.goniometer)":[[25,"dxtbx.model.goniometer.Goniometer",false]],"goniometercomparison (class in dxtbx.model.experiment_list)":[[24,"dxtbx.model.experiment_list.GoniometerComparison",false]],"goniometerfactory (class in dxtbx.model.goniometer)":[[25,"dxtbx.model.goniometer.GoniometerFactory",false]],"goniometers() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.goniometers",false]],"gradient_threshold (dials.algorithms.refinement.engine.gaussnewtoniterations attribute)":[[14,"dials.algorithms.refinement.engine.GaussNewtonIterations.gradient_threshold",false]],"groups_cache() (in module dials.algorithms.indexing.symmetry)":[[11,"dials.algorithms.indexing.symmetry.groups_cache",false]],"has_dynamic_mask() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.has_dynamic_mask",false]],"has_projection_2d() (dxtbx.model.detector method)":[[23,"dxtbx.model.Detector.has_projection_2d",false]],"has_single_file_reader() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.has_single_file_reader",false]],"heading() (in module dials.util.command_line)":[[33,"dials.util.command_line.heading",false]],"hierarchy() (dxtbx.model.detector method)":[[23,"dxtbx.model.Detector.hierarchy",false]],"hist() (in module dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.hist",false]],"history (dials.algorithms.refinement.refiner.refiner property)":[[14,"dials.algorithms.refinement.refiner.Refiner.history",false]],"hkl_offset (dials.algorithms.indexing.model_evaluation.result attribute)":[[11,"dials.algorithms.indexing.model_evaluation.Result.hkl_offset",false]],"id_ (dials.algorithms.scaling.model.model.arrayscalingmodel attribute)":[[15,"dials.algorithms.scaling.model.model.ArrayScalingModel.id_",false]],"id_ (dials.algorithms.scaling.model.model.dosedecay attribute)":[[15,"dials.algorithms.scaling.model.model.DoseDecay.id_",false]],"id_ (dials.algorithms.scaling.model.model.kbscalingmodel attribute)":[[15,"dials.algorithms.scaling.model.model.KBScalingModel.id_",false]],"id_ (dials.algorithms.scaling.model.model.physicalscalingmodel attribute)":[[15,"dials.algorithms.scaling.model.model.PhysicalScalingModel.id_",false]],"id_ (dials.algorithms.scaling.model.model.scalingmodelbase attribute)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.id_",false]],"identifiers (dials.util.export_mtz.wavelengthgroup attribute)":[[33,"dials.util.export_mtz.WavelengthGroup.identifiers",false]],"identifiers() (dxtbx.imageset.memreader method)":[[26,"dxtbx.imageset.MemReader.identifiers",false]],"identifiers() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.identifiers",false]],"identify_outliers() (dials.algorithms.indexing.stills_indexer.stillsindexer method)":[[11,"dials.algorithms.indexing.stills_indexer.StillsIndexer.identify_outliers",false]],"imagegrid (class in dxtbx.imageset)":[[26,"dxtbx.imageset.ImageGrid",false]],"imagesequence (class in dxtbx.imageset)":[[26,"dxtbx.imageset.ImageSequence",false]],"imagesequence_from_dict() (in module dxtbx.serialize.imageset)":[[30,"dxtbx.serialize.imageset.imagesequence_from_dict",false]],"imagesequence_to_dict() (in module dxtbx.serialize.imageset)":[[30,"dxtbx.serialize.imageset.imagesequence_to_dict",false]],"imageset (class in dxtbx.imageset)":[[26,"dxtbx.imageset.ImageSet",false]],"imageset() (in module dxtbx.serialize.load)":[[30,"dxtbx.serialize.load.imageset",false]],"imageset_from_anyset() (dxtbx.imageset.imagesetfactory static method)":[[26,"dxtbx.imageset.ImageSetFactory.imageset_from_anyset",false]],"imageset_from_dict() (in module dxtbx.serialize.imageset)":[[30,"dxtbx.serialize.imageset.imageset_from_dict",false]],"imageset_to_dict() (in module dxtbx.serialize.imageset)":[[30,"dxtbx.serialize.imageset.imageset_to_dict",false]],"imagesetdata (class in dxtbx.imageset)":[[26,"dxtbx.imageset.ImageSetData",false]],"imagesetfactory (class in dxtbx.imageset)":[[26,"dxtbx.imageset.ImageSetFactory",false]],"imagesetlazy (class in dxtbx.imageset)":[[26,"dxtbx.imageset.ImageSetLazy",false]],"imagesets() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.imagesets",false]],"imgcif() (dxtbx.model.beam.beamfactory static method)":[[21,"dxtbx.model.beam.BeamFactory.imgCIF",false]],"imgcif() (dxtbx.model.detector.detectorfactory static method)":[[23,"dxtbx.model.detector.DetectorFactory.imgCIF",false]],"imgcif() (dxtbx.model.goniometer.goniometerfactory static method)":[[25,"dxtbx.model.goniometer.GoniometerFactory.imgCIF",false]],"imgcif() (dxtbx.model.scan.scanfactory static method)":[[29,"dxtbx.model.scan.ScanFactory.imgCIF",false]],"imgcif_h() (dxtbx.model.beam.beamfactory static method)":[[21,"dxtbx.model.beam.BeamFactory.imgCIF_H",false]],"imgcif_h() (dxtbx.model.detector.detectorfactory static method)":[[23,"dxtbx.model.detector.DetectorFactory.imgCIF_H",false]],"imgcif_h() (dxtbx.model.goniometer.goniometerfactory static method)":[[25,"dxtbx.model.goniometer.GoniometerFactory.imgCIF_H",false]],"imgcif_h() (dxtbx.model.scan.scanfactory static method)":[[29,"dxtbx.model.scan.ScanFactory.imgCIF_H",false]],"importer (class in dials.util.options)":[[33,"dials.util.options.Importer",false]],"include_gui_packages (dials.util.installer.installer attribute)":[[33,"dials.util.installer.installer.include_gui_packages",false]],"indent (dials.util.command_line.command attribute)":[[33,"dials.util.command_line.Command.indent",false]],"index() (dials.algorithms.indexing.indexer.indexer method)":[[11,"dials.algorithms.indexing.indexer.Indexer.index",false]],"index() (dials.algorithms.indexing.stills_indexer.stillsindexer method)":[[11,"dials.algorithms.indexing.stills_indexer.StillsIndexer.index",false]],"index_reflections() (dials.algorithms.indexing.indexer.indexer method)":[[11,"dials.algorithms.indexing.indexer.Indexer.index_reflections",false]],"indexer (class in dials.algorithms.indexing.indexer)":[[11,"dials.algorithms.indexing.indexer.Indexer",false]],"indices() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.indices",false]],"indices() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.indices",false]],"initialise() (dials.algorithms.integration.integrator.integrator3dthreaded method)":[[12,"dials.algorithms.integration.integrator.Integrator3DThreaded.initialise",false]],"initialise_smooth_input() (in module dials.algorithms.scaling.model.model)":[[15,"dials.algorithms.scaling.model.model.initialise_smooth_input",false]],"initialize() (dials.algorithms.integration.integrator.integratorexecutor method)":[[12,"dials.algorithms.integration.integrator.IntegratorExecutor.initialize",false]],"initialize() (dials.algorithms.integration.integrator.profilemodellerexecutor method)":[[12,"dials.algorithms.integration.integrator.ProfileModellerExecutor.initialize",false]],"initialize() (dials.algorithms.integration.integrator.profilevalidatorexecutor method)":[[12,"dials.algorithms.integration.integrator.ProfileValidatorExecutor.initialize",false]],"initialize_reflections() (dials.algorithms.integration.integrator.integrator2d static method)":[[12,"dials.algorithms.integration.integrator.Integrator2D.initialize_reflections",false]],"initialize_reflections() (dials.algorithms.integration.integrator.integrator3d static method)":[[12,"dials.algorithms.integration.integrator.Integrator3D.initialize_reflections",false]],"initialize_reflections() (dials.algorithms.integration.integrator.integratorflat3d static method)":[[12,"dials.algorithms.integration.integrator.IntegratorFlat3D.initialize_reflections",false]],"initialize_reflections() (dials.algorithms.integration.integrator.integratorsingle2d static method)":[[12,"dials.algorithms.integration.integrator.IntegratorSingle2D.initialize_reflections",false]],"initialize_reflections() (dials.algorithms.integration.integrator.integratorstills static method)":[[12,"dials.algorithms.integration.integrator.IntegratorStills.initialize_reflections",false]],"installer (class in dials.util.installer)":[[33,"dials.util.installer.installer",false]],"installer_dir (dials.util.installer.installer attribute)":[[33,"dials.util.installer.installer.installer_dir",false]],"integrate() (dials.algorithms.integration.integrator.integrator method)":[[12,"dials.algorithms.integration.integrator.Integrator.integrate",false]],"integrate() (dials.algorithms.integration.integrator.integrator3dthreaded method)":[[12,"dials.algorithms.integration.integrator.Integrator3DThreaded.integrate",false]],"integrator (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.Integrator",false]],"integrator2d (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.Integrator2D",false]],"integrator3d (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.Integrator3D",false]],"integrator3dthreaded (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.Integrator3DThreaded",false]],"integratorexecutor (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.IntegratorExecutor",false]],"integratorflat3d (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.IntegratorFlat3D",false]],"integratorsingle2d (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.IntegratorSingle2D",false]],"integratorstills (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.IntegratorStills",false]],"inv_d2() (dials.algorithms.background.radialaverage method)":[[10,"dials.algorithms.background.RadialAverage.inv_d2",false]],"invalidphilerror":[[33,"dials.util.options.InvalidPhilError",false]],"is_consistent() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.is_consistent",false]],"is_marked_for_rejection() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.is_marked_for_rejection",false]],"is_marked_for_rejection() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.is_marked_for_rejection",false]],"is_scaled (dials.algorithms.scaling.model.model.scalingmodelbase property)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.is_scaled",false]],"is_similar_to() (dxtbx.model.detector method)":[[23,"dxtbx.model.Detector.is_similar_to",false]],"is_similar_to() (dxtbx.model.goniometer.goniometer method)":[[25,"dxtbx.model.goniometer.Goniometer.is_similar_to",false]],"is_similar_to() (dxtbx.model.mosaiccrystalkabsch2010 method)":[[22,"dxtbx.model.MosaicCrystalKabsch2010.is_similar_to",false]],"is_similar_to() (dxtbx.model.mosaiccrystalsauter2014 method)":[[22,"dxtbx.model.MosaicCrystalSauter2014.is_similar_to",false]],"is_single_file_reader() (dxtbx.imageset.memreader static method)":[[26,"dxtbx.imageset.MemReader.is_single_file_reader",false]],"iter_levelorder() (dxtbx.model.detector method)":[[23,"dxtbx.model.Detector.iter_levelorder",false]],"iter_panels() (dxtbx.model.detector method)":[[23,"dxtbx.model.Detector.iter_panels",false]],"iter_preorder() (dxtbx.model.detector method)":[[23,"dxtbx.model.Detector.iter_preorder",false]],"jacobian_condition_number() (dials.algorithms.refinement.engine.refinery method)":[[14,"dials.algorithms.refinement.engine.Refinery.jacobian_condition_number",false]],"job() (dials.algorithms.integration.integrator.reflectionmanager method)":[[12,"dials.algorithms.integration.integrator.ReflectionManager.job",false]],"joblist (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.JobList",false]],"journal (class in dials.algorithms.refinement.engine)":[[14,"dials.algorithms.refinement.engine.Journal",false]],"kappa() (dxtbx.model.goniometer.goniometerfactory static method)":[[25,"dxtbx.model.goniometer.GoniometerFactory.kappa",false]],"kappagoniometer (class in dxtbx.model.goniometer)":[[25,"dxtbx.model.goniometer.KappaGoniometer",false]],"kbscalingmodel (class in dials.algorithms.scaling.model.model)":[[15,"dials.algorithms.scaling.model.model.KBScalingModel",false]],"kernel_normalisation() (dials.algorithms.symmetry.symmetry_base static method)":[[18,"dials.algorithms.symmetry.symmetry_base.kernel_normalisation",false]],"known_axis() (dxtbx.model.goniometer.goniometerfactory static method)":[[25,"dxtbx.model.goniometer.GoniometerFactory.known_axis",false]],"laue_manager() (dials.algorithms.refinement.reflection_manager.reflectionmanagerfactory static method)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManagerFactory.laue_manager",false]],"lauegroupanalysis (class in dials.algorithms.symmetry.laue_group)":[[18,"dials.algorithms.symmetry.laue_group.LaueGroupAnalysis",false]],"laueleastsquaresresidualwithrmsdcutoff (class in dials.algorithms.refinement.target)":[[14,"dials.algorithms.refinement.target.LaueLeastSquaresResidualWithRmsdCutoff",false]],"lauemixedweightingstrategy (class in dials.algorithms.refinement.weighting_strategies)":[[14,"dials.algorithms.refinement.weighting_strategies.LaueMixedWeightingStrategy",false]],"lauereflectionmanager (class in dials.algorithms.refinement.reflection_manager)":[[14,"dials.algorithms.refinement.reflection_manager.LaueReflectionManager",false]],"lauestatisticalweightingstrategy (class in dials.algorithms.refinement.weighting_strategies)":[[14,"dials.algorithms.refinement.weighting_strategies.LaueStatisticalWeightingStrategy",false]],"lbfgs_with_curvs (class in dials.algorithms.symmetry.cosym.engine)":[[18,"dials.algorithms.symmetry.cosym.engine.lbfgs_with_curvs",false]],"lbfgscurvs (class in dials.algorithms.refinement.engine)":[[14,"dials.algorithms.refinement.engine.LBFGScurvs",false]],"leastsquarespositionalresidualwithrmsdcutoff (class in dials.algorithms.refinement.target)":[[14,"dials.algorithms.refinement.target.LeastSquaresPositionalResidualWithRmsdCutoff",false]],"leastsquarespositionalresidualwithrmsdcutoffsparse (class in dials.algorithms.refinement.target)":[[14,"dials.algorithms.refinement.target.LeastSquaresPositionalResidualWithRmsdCutoffSparse",false]],"leastsquaresstillsresidualwithrmsdcutoff (class in dials.algorithms.refinement.target_stills)":[[14,"dials.algorithms.refinement.target_stills.LeastSquaresStillsResidualWithRmsdCutoff",false]],"leastsquaresstillsresidualwithrmsdcutoffsparse (class in dials.algorithms.refinement.target_stills)":[[14,"dials.algorithms.refinement.target_stills.LeastSquaresStillsResidualWithRmsdCutoffSparse",false]],"levenbergmarquardtiterations (class in dials.algorithms.refinement.engine)":[[14,"dials.algorithms.refinement.engine.LevenbergMarquardtIterations",false]],"limit_image_range() (dials.algorithms.scaling.model.model.arrayscalingmodel method)":[[15,"dials.algorithms.scaling.model.model.ArrayScalingModel.limit_image_range",false]],"limit_image_range() (dials.algorithms.scaling.model.model.dosedecay method)":[[15,"dials.algorithms.scaling.model.model.DoseDecay.limit_image_range",false]],"limit_image_range() (dials.algorithms.scaling.model.model.physicalscalingmodel method)":[[15,"dials.algorithms.scaling.model.model.PhysicalScalingModel.limit_image_range",false]],"limit_image_range() (dials.algorithms.scaling.model.model.scalingmodelbase method)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.limit_image_range",false]],"load() (in module dials.util.nexus)":[[33,"dials.util.nexus.load",false]],"load_error_model() (dials.algorithms.scaling.model.model.scalingmodelbase method)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.load_error_model",false]],"load_image() (dials.algorithms.spot_finding.factory.spotfinderfactory static method)":[[16,"dials.algorithms.spot_finding.factory.SpotFinderFactory.load_image",false]],"log_summary() (in module dials.util.export_mtz)":[[33,"dials.util.export_mtz.log_summary",false]],"lowresspotmatch (class in dials.algorithms.indexing.lattice_search)":[[11,"dials.algorithms.indexing.lattice_search.LowResSpotMatch",false]],"madmergedmtzwriter (class in dials.util.export_mtz)":[[33,"dials.util.export_mtz.MADMergedMTZWriter",false]],"make_apps (dials.util.installer.installer attribute)":[[33,"dials.util.installer.installer.make_apps",false]],"make_beam() (dxtbx.model.beam.beamfactory static method)":[[21,"dxtbx.model.beam.BeamFactory.make_beam",false]],"make_combined_plots() (in module dials.algorithms.scaling.model.model)":[[15,"dials.algorithms.scaling.model.model.make_combined_plots",false]],"make_detector() (dxtbx.model.detector.detectorfactory static method)":[[23,"dxtbx.model.detector.DetectorFactory.make_detector",false]],"make_goniometer() (dxtbx.model.goniometer.goniometerfactory static method)":[[25,"dxtbx.model.goniometer.GoniometerFactory.make_goniometer",false]],"make_imageset() (dxtbx.imageset.imagesetfactory static method)":[[26,"dxtbx.imageset.ImageSetFactory.make_imageset",false]],"make_kappa_goniometer() (dxtbx.model.goniometer.goniometerfactory static method)":[[25,"dxtbx.model.goniometer.GoniometerFactory.make_kappa_goniometer",false]],"make_multi_axis_goniometer() (dxtbx.model.goniometer.goniometerfactory static method)":[[25,"dxtbx.model.goniometer.GoniometerFactory.make_multi_axis_goniometer",false]],"make_polarized_beam() (dxtbx.model.beam.beamfactory static method)":[[21,"dxtbx.model.beam.BeamFactory.make_polarized_beam",false]],"make_polychromatic_beam() (dxtbx.model.beam.beamfactory static method)":[[21,"dxtbx.model.beam.BeamFactory.make_polychromatic_beam",false]],"make_scan() (dxtbx.model.scan.scanfactory static method)":[[29,"dxtbx.model.scan.ScanFactory.make_scan",false]],"make_scan_from_properties() (dxtbx.model.scan.scanfactory static method)":[[29,"dxtbx.model.scan.ScanFactory.make_scan_from_properties",false]],"make_sequence() (dxtbx.imageset.imagesetfactory static method)":[[26,"dxtbx.imageset.ImageSetFactory.make_sequence",false]],"mark_for_rejection() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.mark_for_rejection",false]],"mark_for_rejection() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.mark_for_rejection",false]],"mask (dxtbx.imageset.externallookup property)":[[26,"dxtbx.imageset.ExternalLookup.mask",false]],"masker() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.masker",false]],"masker() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.masker",false]],"master_path() (dxtbx.imageset.memreader static method)":[[26,"dxtbx.imageset.MemReader.master_path",false]],"match_wavelengths() (in module dials.util.export_mtz)":[[33,"dials.util.export_mtz.match_wavelengths",false]],"max_length (dials.util.command_line.command attribute)":[[33,"dials.util.command_line.Command.max_length",false]],"max_possible_wl (dials.util.export_mtz.wavelengthgroup attribute)":[[33,"dials.util.export_mtz.WavelengthGroup.max_possible_wl",false]],"max_shift_over_esd (dials.algorithms.refinement.engine.gaussnewtoniterations attribute)":[[14,"dials.algorithms.refinement.engine.GaussNewtonIterations.max_shift_over_esd",false]],"mean() (dials.algorithms.background.radialaverage method)":[[10,"dials.algorithms.background.RadialAverage.mean",false]],"median_unit_cell() (in module dials.algorithms.symmetry)":[[18,"dials.algorithms.symmetry.median_unit_cell",false]],"memreader (class in dxtbx.imageset)":[[26,"dxtbx.imageset.MemReader",false]],"merge_panel_scope_extracts_by_id() (in module dxtbx.model.detector)":[[23,"dxtbx.model.detector.merge_panel_scope_extracts_by_id",false]],"mergedmtzwriter (class in dials.util.export_mtz)":[[33,"dials.util.export_mtz.MergedMTZWriter",false]],"message (dials.util.options.argumenthandlingerrorinfo attribute)":[[33,"dials.util.options.ArgumentHandlingErrorInfo.message",false]],"metric_supergroup() (in module dials.algorithms.indexing.symmetry)":[[11,"dials.algorithms.indexing.symmetry.metric_supergroup",false]],"min_wl (dials.util.export_mtz.wavelengthgroup attribute)":[[33,"dials.util.export_mtz.WavelengthGroup.min_wl",false]],"minimize_scipy() (in module dials.algorithms.symmetry.cosym.engine)":[[18,"dials.algorithms.symmetry.cosym.engine.minimize_scipy",false]],"minimize_scitbx_lbfgs() (in module dials.algorithms.symmetry.cosym.engine)":[[18,"dials.algorithms.symmetry.cosym.engine.minimize_scitbx_lbfgs",false]],"ml_aniso_normalisation() (dials.algorithms.symmetry.symmetry_base static method)":[[18,"dials.algorithms.symmetry.symmetry_base.ml_aniso_normalisation",false]],"ml_iso_normalisation() (dials.algorithms.symmetry.symmetry_base static method)":[[18,"dials.algorithms.symmetry.symmetry_base.ml_iso_normalisation",false]],"model_likelihood (dials.algorithms.indexing.model_evaluation.result attribute)":[[11,"dials.algorithms.indexing.model_evaluation.Result.model_likelihood",false]],"modelevaluation (class in dials.algorithms.indexing.model_evaluation)":[[11,"dials.algorithms.indexing.model_evaluation.ModelEvaluation",false]],"modelrank (class in dials.algorithms.indexing.model_evaluation)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRank",false]],"modelrankfilter (class in dials.algorithms.indexing.model_evaluation)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRankFilter",false]],"modelrankweighted (class in dials.algorithms.indexing.model_evaluation)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRankWeighted",false]],"module":[[10,"module-dials.algorithms.background",false],[11,"module-dials.algorithms.indexing",false],[11,"module-dials.algorithms.indexing.assign_indices",false],[11,"module-dials.algorithms.indexing.basis_vector_search",false],[11,"module-dials.algorithms.indexing.basis_vector_search.combinations",false],[11,"module-dials.algorithms.indexing.basis_vector_search.optimise",false],[11,"module-dials.algorithms.indexing.compare_orientation_matrices",false],[11,"module-dials.algorithms.indexing.indexer",false],[11,"module-dials.algorithms.indexing.lattice_search",false],[11,"module-dials.algorithms.indexing.max_cell",false],[11,"module-dials.algorithms.indexing.model_evaluation",false],[11,"module-dials.algorithms.indexing.nearest_neighbor",false],[11,"module-dials.algorithms.indexing.refinement",false],[11,"module-dials.algorithms.indexing.stills_indexer",false],[11,"module-dials.algorithms.indexing.symmetry",false],[12,"module-dials.algorithms.integration.integrator",false],[13,"module-dials.algorithms.profile_model",false],[14,"module-dials.algorithms.refinement.engine",false],[14,"module-dials.algorithms.refinement.refiner",false],[14,"module-dials.algorithms.refinement.reflection_manager",false],[14,"module-dials.algorithms.refinement.target",false],[14,"module-dials.algorithms.refinement.target_stills",false],[14,"module-dials.algorithms.refinement.weighting_strategies",false],[15,"module-dials.algorithms.scaling",false],[15,"module-dials.algorithms.scaling.model.model",false],[15,"module-dials.algorithms.scaling.outlier_rejection",false],[16,"module-dials.algorithms.spot_finding.factory",false],[16,"module-dials.algorithms.spot_finding.finder",false],[17,"module-dials.algorithms.spot_prediction.reflection_predictor",false],[18,"module-dials.algorithms.symmetry",false],[18,"module-dials.algorithms.symmetry.cosym",false],[18,"module-dials.algorithms.symmetry.cosym.engine",false],[18,"module-dials.algorithms.symmetry.cosym.target",false],[18,"module-dials.algorithms.symmetry.laue_group",false],[18,"module-dials.algorithms.symmetry.reindex_to_reference",false],[20,"module-dials.array_family.flex",false],[21,"module-dxtbx.model.beam",false],[22,"module-dxtbx.model.crystal",false],[23,"module-dxtbx.model.detector",false],[24,"module-dxtbx.model.experiment_list",false],[25,"module-dxtbx.model.goniometer",false],[26,"module-dxtbx.imageset",false],[28,"module-dxtbx.model.profile",false],[29,"module-dxtbx.model.scan",false],[30,"module-dxtbx.serialize.imageset",false],[30,"module-dxtbx.serialize.load",false],[30,"module-dxtbx.serialize.xds",false],[31,"module-dials.extensions.dispersion_spotfinder_threshold_ext",false],[31,"module-dials.extensions.gaussian_rs_profile_model_ext",false],[31,"module-dials.extensions.null_background_ext",false],[31,"module-dials.extensions.simple_background_ext",false],[31,"module-dials.extensions.simple_centroid_ext",false],[33,"module-dials.util.command_line",false],[33,"module-dials.util.export_mtz",false],[33,"module-dials.util.export_text",false],[33,"module-dials.util.image",false],[33,"module-dials.util.installer",false],[33,"module-dials.util.ioutil",false],[33,"module-dials.util.nexus",false],[33,"module-dials.util.options",false]],"mosaiccrystalkabsch2010 (class in dxtbx.model)":[[22,"dxtbx.model.MosaicCrystalKabsch2010",false]],"mosaiccrystalsauter2014 (class in dxtbx.model)":[[22,"dxtbx.model.MosaicCrystalSauter2014",false]],"mtzwriterbase (class in dials.util.export_mtz)":[[33,"dials.util.export_mtz.MTZWriterBase",false]],"mu (dials.algorithms.refinement.engine.levenbergmarquardtiterations property)":[[14,"dials.algorithms.refinement.engine.LevenbergMarquardtIterations.mu",false]],"multi_axis() (dxtbx.model.goniometer.goniometerfactory static method)":[[25,"dxtbx.model.goniometer.GoniometerFactory.multi_axis",false]],"multi_axis_goniometer_from_phil() (dxtbx.model.goniometer.goniometerfactory static method)":[[25,"dxtbx.model.goniometer.GoniometerFactory.multi_axis_goniometer_from_phil",false]],"multiaxisgoniometer (class in dxtbx.model.goniometer)":[[25,"dxtbx.model.goniometer.MultiAxisGoniometer",false]],"n() (dials.algorithms.symmetry.laue_group.correlationcoefficientaccumulator method)":[[18,"dials.algorithms.symmetry.laue_group.CorrelationCoefficientAccumulator.n",false]],"n_indexed (dials.algorithms.indexing.model_evaluation.result attribute)":[[11,"dials.algorithms.indexing.model_evaluation.Result.n_indexed",false]],"n_params (dials.algorithms.scaling.model.model.scalingmodelbase property)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.n_params",false]],"name (dials.extensions.dispersion_spotfinder_threshold_ext.dispersionspotfinderthresholdext attribute)":[[31,"dials.extensions.dispersion_spotfinder_threshold_ext.DispersionSpotFinderThresholdExt.name",false]],"name (dials.extensions.gaussian_rs_profile_model_ext.gaussianrsprofilemodelext attribute)":[[31,"dials.extensions.gaussian_rs_profile_model_ext.GaussianRSProfileModelExt.name",false]],"name (dials.extensions.null_background_ext.nullbackgroundext attribute)":[[31,"dials.extensions.null_background_ext.NullBackgroundExt.name",false]],"name (dials.extensions.simple_background_ext.simplebackgroundext attribute)":[[31,"dials.extensions.simple_background_ext.SimpleBackgroundExt.name",false]],"name (dials.extensions.simple_centroid_ext.simplecentroidext attribute)":[[31,"dials.extensions.simple_centroid_ext.SimpleCentroidExt.name",false]],"name (dials.util.options.argumenthandlingerrorinfo attribute)":[[33,"dials.util.options.ArgumentHandlingErrorInfo.name",false]],"neighboranalysis (class in dials.algorithms.indexing.nearest_neighbor)":[[11,"dials.algorithms.indexing.nearest_neighbor.NeighborAnalysis",false]],"new() (dxtbx.imageset.imagesetfactory static method)":[[26,"dxtbx.imageset.ImageSetFactory.new",false]],"nframes_hist() (in module dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.nframes_hist",false]],"normdevoutlierrejection (class in dials.algorithms.scaling.outlier_rejection)":[[15,"dials.algorithms.scaling.outlier_rejection.NormDevOutlierRejection",false]],"nullbackgroundext (class in dials.extensions.null_background_ext)":[[31,"dials.extensions.null_background_ext.NullBackgroundExt",false]],"nullify_all_single_file_reader_format_instances() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.nullify_all_single_file_reader_format_instances",false]],"num_reflections() (dials.algorithms.integration.integrator.reflectionmanager method)":[[12,"dials.algorithms.integration.integrator.ReflectionManager.num_reflections",false]],"num_scan_points (dxtbx.model.goniometer.goniometer property)":[[25,"dxtbx.model.goniometer.Goniometer.num_scan_points",false]],"numerator() (dials.algorithms.symmetry.laue_group.correlationcoefficientaccumulator method)":[[18,"dials.algorithms.symmetry.laue_group.CorrelationCoefficientAccumulator.numerator",false]],"optimise_basis_vectors() (in module dials.algorithms.indexing.basis_vector_search.optimise)":[[11,"dials.algorithms.indexing.basis_vector_search.optimise.optimise_basis_vectors",false]],"optionparser (class in dials.util.options)":[[33,"dials.util.options.OptionParser",false]],"outlierrejectionbase (class in dials.algorithms.scaling.outlier_rejection)":[[15,"dials.algorithms.scaling.outlier_rejection.OutlierRejectionBase",false]],"overwrite_from_phil() (dxtbx.model.detector.detectorfactory static method)":[[23,"dxtbx.model.detector.DetectorFactory.overwrite_from_phil",false]],"p_cc_given_not_s (dials.algorithms.symmetry.laue_group.scorecorrelationcoefficient property)":[[18,"dials.algorithms.symmetry.laue_group.ScoreCorrelationCoefficient.p_cc_given_not_s",false]],"p_cc_given_s (dials.algorithms.symmetry.laue_group.scorecorrelationcoefficient property)":[[18,"dials.algorithms.symmetry.laue_group.ScoreCorrelationCoefficient.p_cc_given_s",false]],"p_s_given_cc (dials.algorithms.symmetry.laue_group.scorecorrelationcoefficient property)":[[18,"dials.algorithms.symmetry.laue_group.ScoreCorrelationCoefficient.p_s_given_cc",false]],"parameter_vector_norm() (dials.algorithms.refinement.engine.adaptlstbx method)":[[14,"dials.algorithms.refinement.engine.AdaptLstbx.parameter_vector_norm",false]],"parameters (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.Parameters",false]],"parameters.filter (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.Parameters.Filter",false]],"parameters.profile (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.Parameters.Profile",false]],"parameters.profile.validation (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.Parameters.Profile.Validation",false]],"params() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.params",false]],"parse_args() (dials.util.options.argumentparser method)":[[33,"dials.util.options.ArgumentParser.parse_args",false]],"parse_args() (dials.util.options.philcommandparser method)":[[33,"dials.util.options.PhilCommandParser.parse_args",false]],"parse_known_args() (dials.util.options.argumentparserbase method)":[[33,"dials.util.options.ArgumentParserBase.parse_known_args",false]],"partial_data() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.partial_data",false]],"partial_set() (dxtbx.imageset.imagesequence method)":[[26,"dxtbx.imageset.ImageSequence.partial_set",false]],"partial_set() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.partial_set",false]],"paths() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.paths",false]],"paths() (dxtbx.imageset.memreader method)":[[26,"dxtbx.imageset.MemReader.paths",false]],"peakcentroiddistancefilter (class in dials.algorithms.spot_finding.factory)":[[16,"dials.algorithms.spot_finding.factory.PeakCentroidDistanceFilter",false]],"pedestal (dxtbx.imageset.externallookup property)":[[26,"dxtbx.imageset.ExternalLookup.pedestal",false]],"per_image() (dials.algorithms.refinement.reflection_manager.blockcalculator method)":[[14,"dials.algorithms.refinement.reflection_manager.BlockCalculator.per_image",false]],"per_width() (dials.algorithms.refinement.reflection_manager.blockcalculator method)":[[14,"dials.algorithms.refinement.reflection_manager.BlockCalculator.per_width",false]],"phil (dials.util.options.argumentparser property)":[[33,"dials.util.options.ArgumentParser.phil",false]],"phil (dials.util.options.philcommandparser property)":[[33,"dials.util.options.PhilCommandParser.phil",false]],"phil() (dials.extensions.dispersion_spotfinder_threshold_ext.dispersionspotfinderthresholdext static method)":[[31,"dials.extensions.dispersion_spotfinder_threshold_ext.DispersionSpotFinderThresholdExt.phil",false]],"phil() (dials.extensions.gaussian_rs_profile_model_ext.gaussianrsprofilemodelext static method)":[[31,"dials.extensions.gaussian_rs_profile_model_ext.GaussianRSProfileModelExt.phil",false]],"phil() (dials.extensions.simple_background_ext.simplebackgroundext static method)":[[31,"dials.extensions.simple_background_ext.SimpleBackgroundExt.phil",false]],"phil_help (dials.algorithms.indexing.basis_vector_search.fft1d attribute)":[[11,"dials.algorithms.indexing.basis_vector_search.FFT1D.phil_help",false]],"phil_help (dials.algorithms.indexing.basis_vector_search.fft3d attribute)":[[11,"dials.algorithms.indexing.basis_vector_search.FFT3D.phil_help",false]],"phil_help (dials.algorithms.indexing.basis_vector_search.realspacegridsearch attribute)":[[11,"dials.algorithms.indexing.basis_vector_search.RealSpaceGridSearch.phil_help",false]],"phil_help (dials.algorithms.indexing.basis_vector_search.strategy attribute)":[[11,"dials.algorithms.indexing.basis_vector_search.Strategy.phil_help",false]],"phil_help (dials.algorithms.indexing.lattice_search.ffbindexer attribute)":[[11,"dials.algorithms.indexing.lattice_search.FfbIndexer.phil_help",false]],"phil_help (dials.algorithms.indexing.lattice_search.lowresspotmatch attribute)":[[11,"dials.algorithms.indexing.lattice_search.LowResSpotMatch.phil_help",false]],"phil_help (dials.algorithms.indexing.lattice_search.pinkindexer attribute)":[[11,"dials.algorithms.indexing.lattice_search.PinkIndexer.phil_help",false]],"phil_help (dials.algorithms.indexing.lattice_search.strategy attribute)":[[11,"dials.algorithms.indexing.lattice_search.Strategy.phil_help",false]],"phil_scope (dials.algorithms.indexing.basis_vector_search.fft1d attribute)":[[11,"dials.algorithms.indexing.basis_vector_search.FFT1D.phil_scope",false]],"phil_scope (dials.algorithms.indexing.basis_vector_search.fft3d attribute)":[[11,"dials.algorithms.indexing.basis_vector_search.FFT3D.phil_scope",false]],"phil_scope (dials.algorithms.indexing.basis_vector_search.realspacegridsearch attribute)":[[11,"dials.algorithms.indexing.basis_vector_search.RealSpaceGridSearch.phil_scope",false]],"phil_scope (dials.algorithms.indexing.basis_vector_search.strategy attribute)":[[11,"dials.algorithms.indexing.basis_vector_search.Strategy.phil_scope",false]],"phil_scope (dials.algorithms.indexing.lattice_search.ffbindexer attribute)":[[11,"dials.algorithms.indexing.lattice_search.FfbIndexer.phil_scope",false]],"phil_scope (dials.algorithms.indexing.lattice_search.lowresspotmatch attribute)":[[11,"dials.algorithms.indexing.lattice_search.LowResSpotMatch.phil_scope",false]],"phil_scope (dials.algorithms.indexing.lattice_search.pinkindexer attribute)":[[11,"dials.algorithms.indexing.lattice_search.PinkIndexer.phil_scope",false]],"phil_scope (dials.algorithms.indexing.lattice_search.strategy attribute)":[[11,"dials.algorithms.indexing.lattice_search.Strategy.phil_scope",false]],"phil_scope (dials.algorithms.scaling.model.model.arrayscalingmodel attribute)":[[15,"dials.algorithms.scaling.model.model.ArrayScalingModel.phil_scope",false]],"phil_scope (dials.algorithms.scaling.model.model.dosedecay attribute)":[[15,"dials.algorithms.scaling.model.model.DoseDecay.phil_scope",false]],"phil_scope (dials.algorithms.scaling.model.model.kbscalingmodel attribute)":[[15,"dials.algorithms.scaling.model.model.KBScalingModel.phil_scope",false]],"phil_scope (dials.algorithms.scaling.model.model.physicalscalingmodel attribute)":[[15,"dials.algorithms.scaling.model.model.PhysicalScalingModel.phil_scope",false]],"philcommandparser (class in dials.util.options)":[[33,"dials.util.options.PhilCommandParser",false]],"physicalscalingmodel (class in dials.algorithms.scaling.model.model)":[[15,"dials.algorithms.scaling.model.model.PhysicalScalingModel",false]],"pinkindexer (class in dials.algorithms.indexing.lattice_search)":[[11,"dials.algorithms.indexing.lattice_search.PinkIndexer",false]],"pixel_list_to_reflection_table() (in module dials.algorithms.spot_finding.finder)":[[16,"dials.algorithms.spot_finding.finder.pixel_list_to_reflection_table",false]],"pixel_list_to_shoeboxes() (in module dials.algorithms.spot_finding.finder)":[[16,"dials.algorithms.spot_finding.finder.pixel_list_to_shoeboxes",false]],"plot_displacements() (in module dials.algorithms.indexing.stills_indexer)":[[11,"dials.algorithms.indexing.stills_indexer.plot_displacements",false]],"plot_histogram() (dials.algorithms.indexing.nearest_neighbor.neighboranalysis method)":[[11,"dials.algorithms.indexing.nearest_neighbor.NeighborAnalysis.plot_histogram",false]],"plot_model_components() (dials.algorithms.scaling.model.model.arrayscalingmodel method)":[[15,"dials.algorithms.scaling.model.model.ArrayScalingModel.plot_model_components",false]],"plot_model_components() (dials.algorithms.scaling.model.model.dosedecay method)":[[15,"dials.algorithms.scaling.model.model.DoseDecay.plot_model_components",false]],"plot_model_components() (dials.algorithms.scaling.model.model.physicalscalingmodel method)":[[15,"dials.algorithms.scaling.model.model.PhysicalScalingModel.plot_model_components",false]],"plot_model_components() (dials.algorithms.scaling.model.model.scalingmodelbase method)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.plot_model_components",false]],"plot_scaling_models() (in module dials.algorithms.scaling.model.model)":[[15,"dials.algorithms.scaling.model.model.plot_scaling_models",false]],"predict() (dials.algorithms.refinement.target.target method)":[[14,"dials.algorithms.refinement.target.Target.predict",false]],"predict_for_free_reflections() (dials.algorithms.refinement.target.target method)":[[14,"dials.algorithms.refinement.target.Target.predict_for_free_reflections",false]],"predict_for_indexed() (dials.algorithms.refinement.refiner.refiner method)":[[14,"dials.algorithms.refinement.refiner.Refiner.predict_for_indexed",false]],"predict_for_reflection_table() (dials.algorithms.refinement.refiner.refiner method)":[[14,"dials.algorithms.refinement.refiner.Refiner.predict_for_reflection_table",false]],"predict_for_reflection_table() (dials.algorithms.refinement.target.target method)":[[14,"dials.algorithms.refinement.target.Target.predict_for_reflection_table",false]],"predict_for_reflection_table() (dials.algorithms.refinement.target_stills.leastsquaresstillsresidualwithrmsdcutoff method)":[[14,"dials.algorithms.refinement.target_stills.LeastSquaresStillsResidualWithRmsdCutoff.predict_for_reflection_table",false]],"predictor() (dials.algorithms.spot_prediction.reflection_predictor.reflectionpredictor method)":[[17,"dials.algorithms.spot_prediction.reflection_predictor.ReflectionPredictor.predictor",false]],"prepare_for_step() (dials.algorithms.refinement.engine.refinery method)":[[14,"dials.algorithms.refinement.engine.Refinery.prepare_for_step",false]],"print_exp_rmsd_table() (dials.algorithms.refinement.refiner.refiner method)":[[14,"dials.algorithms.refinement.refiner.Refiner.print_exp_rmsd_table",false]],"print_out_of_sample_rmsd_table() (dials.algorithms.refinement.refiner.refiner method)":[[14,"dials.algorithms.refinement.refiner.Refiner.print_out_of_sample_rmsd_table",false]],"print_panel_rmsd_table() (dials.algorithms.refinement.refiner.refiner method)":[[14,"dials.algorithms.refinement.refiner.Refiner.print_panel_rmsd_table",false]],"print_stats_on_matches() (dials.algorithms.refinement.reflection_manager.lauereflectionmanager method)":[[14,"dials.algorithms.refinement.reflection_manager.LaueReflectionManager.print_stats_on_matches",false]],"print_stats_on_matches() (dials.algorithms.refinement.reflection_manager.reflectionmanager method)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManager.print_stats_on_matches",false]],"print_stats_on_matches() (dials.algorithms.refinement.reflection_manager.stillsreflectionmanager method)":[[14,"dials.algorithms.refinement.reflection_manager.StillsReflectionManager.print_stats_on_matches",false]],"print_step_table() (dials.algorithms.refinement.refiner.refiner method)":[[14,"dials.algorithms.refinement.refiner.Refiner.print_step_table",false]],"print_time (dials.util.command_line.command attribute)":[[33,"dials.util.command_line.Command.print_time",false]],"process() (dials.algorithms.integration.integrator.executor method)":[[12,"dials.algorithms.integration.integrator.Executor.process",false]],"process() (dials.algorithms.integration.integrator.integratorexecutor method)":[[12,"dials.algorithms.integration.integrator.IntegratorExecutor.process",false]],"process() (dials.algorithms.integration.integrator.profilemodellerexecutor method)":[[12,"dials.algorithms.integration.integrator.ProfileModellerExecutor.process",false]],"process() (dials.algorithms.integration.integrator.profilevalidatorexecutor method)":[[12,"dials.algorithms.integration.integrator.ProfileValidatorExecutor.process",false]],"processor2d (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.Processor2D",false]],"processor3d (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.Processor3D",false]],"processorclass (dials.algorithms.integration.integrator.integrator2d attribute)":[[12,"dials.algorithms.integration.integrator.Integrator2D.ProcessorClass",false]],"processorclass (dials.algorithms.integration.integrator.integrator3d attribute)":[[12,"dials.algorithms.integration.integrator.Integrator3D.ProcessorClass",false]],"processorclass (dials.algorithms.integration.integrator.integratorflat3d attribute)":[[12,"dials.algorithms.integration.integrator.IntegratorFlat3D.ProcessorClass",false]],"processorclass (dials.algorithms.integration.integrator.integratorsingle2d attribute)":[[12,"dials.algorithms.integration.integrator.IntegratorSingle2D.ProcessorClass",false]],"processorclass (dials.algorithms.integration.integrator.integratorstills attribute)":[[12,"dials.algorithms.integration.integrator.IntegratorStills.ProcessorClass",false]],"processorflat3d (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.ProcessorFlat3D",false]],"processorsingle2d (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.ProcessorSingle2D",false]],"processorstills (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.ProcessorStills",false]],"product_name (dials.util.installer.installer attribute)":[[33,"dials.util.installer.installer.product_name",false]],"product_specific_finalize_install() (dials.util.installer.installer method)":[[33,"dials.util.installer.installer.product_specific_finalize_install",false]],"profilemodelfactory (class in dxtbx.model.profile)":[[28,"dxtbx.model.profile.ProfileModelFactory",false]],"profilemodellerexecutor (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.ProfileModellerExecutor",false]],"profiles() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.profiles",false]],"profilevalidatorexecutor (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.ProfileValidatorExecutor",false]],"progressbar (class in dials.util.command_line)":[[33,"dials.util.command_line.ProgressBar",false]],"progressbartimer (class in dials.util.command_line)":[[33,"dials.util.command_line.ProgressBarTimer",false]],"radialaverage (class in dials.algorithms.background)":[[10,"dials.algorithms.background.RadialAverage",false]],"read() (dxtbx.imageset.memreader method)":[[26,"dxtbx.imageset.MemReader.read",false]],"read_file() (dials.util.image.reader method)":[[33,"dials.util.image.reader.read_file",false]],"reader (class in dials.util.image)":[[33,"dials.util.image.reader",false]],"reader() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.reader",false]],"reader() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.reader",false]],"realspacegridsearch (class in dials.algorithms.indexing.basis_vector_search)":[[11,"dials.algorithms.indexing.basis_vector_search.RealSpaceGridSearch",false]],"reason_for_termination (dials.algorithms.refinement.engine.journal attribute)":[[14,"dials.algorithms.refinement.engine.Journal.reason_for_termination",false]],"record_intensity_combination_imid() (dials.algorithms.scaling.model.model.scalingmodelbase method)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.record_intensity_combination_Imid",false]],"refine() (dials.algorithms.indexing.indexer.indexer method)":[[11,"dials.algorithms.indexing.indexer.Indexer.refine",false]],"refine() (dials.algorithms.indexing.stills_indexer.stillsindexer method)":[[11,"dials.algorithms.indexing.stills_indexer.StillsIndexer.refine",false]],"refine() (in module dials.algorithms.indexing.refinement)":[[11,"dials.algorithms.indexing.refinement.refine",false]],"refiner (class in dials.algorithms.refinement.refiner)":[[14,"dials.algorithms.refinement.refiner.Refiner",false]],"refinerfactory (class in dials.algorithms.refinement.refiner)":[[14,"dials.algorithms.refinement.refiner.RefinerFactory",false]],"refinery (class in dials.algorithms.refinement.engine)":[[14,"dials.algorithms.refinement.engine.Refinery",false]],"reflectionmanager (class in dials.algorithms.integration.integrator)":[[12,"dials.algorithms.integration.integrator.ReflectionManager",false]],"reflectionmanager (class in dials.algorithms.refinement.reflection_manager)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManager",false]],"reflectionmanagerfactory (class in dials.algorithms.refinement.reflection_manager)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManagerFactory",false]],"reflectionpredictor (class in dials.algorithms.spot_prediction.reflection_predictor)":[[17,"dials.algorithms.spot_prediction.reflection_predictor.ReflectionPredictor",false]],"reflections_after_outlier_rejection() (dials.algorithms.refinement.refiner.refinerfactory class method)":[[14,"dials.algorithms.refinement.refiner.RefinerFactory.reflections_after_outlier_rejection",false]],"reflections_and_experiments_from_files() (in module dials.util.options)":[[33,"dials.util.options.reflections_and_experiments_from_files",false]],"reject_outliers() (in module dials.algorithms.scaling.outlier_rejection)":[[15,"dials.algorithms.scaling.outlier_rejection.reject_outliers",false]],"remove_on_experiment_identifiers() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.remove_on_experiment_identifiers",false]],"remove_sources_default (dials.util.installer.installer attribute)":[[33,"dials.util.installer.installer.remove_sources_default",false]],"replace() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.replace",false]],"report() (dials.algorithms.integration.integrator.integrator method)":[[12,"dials.algorithms.integration.integrator.Integrator.report",false]],"report() (dials.algorithms.integration.integrator.integrator3dthreaded method)":[[12,"dials.algorithms.integration.integrator.Integrator3DThreaded.report",false]],"report_progress() (dials.algorithms.refinement.engine.levenbergmarquardtiterations method)":[[14,"dials.algorithms.refinement.engine.LevenbergMarquardtIterations.report_progress",false]],"reset_accepted_reflections() (dials.algorithms.refinement.reflection_manager.reflectionmanager method)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManager.reset_accepted_reflections",false]],"reset_scan_points() (dxtbx.model.goniometer.goniometer method)":[[25,"dxtbx.model.goniometer.Goniometer.reset_scan_points",false]],"resolution_filter_from_array() (in module dials.algorithms.symmetry)":[[18,"dials.algorithms.symmetry.resolution_filter_from_array",false]],"resolution_filter_from_reflections_experiments() (in module dials.algorithms.symmetry)":[[18,"dials.algorithms.symmetry.resolution_filter_from_reflections_experiments",false]],"restart() (dials.algorithms.refinement.engine.adaptlstbx method)":[[14,"dials.algorithms.refinement.engine.AdaptLstbx.restart",false]],"result (class in dials.algorithms.indexing.model_evaluation)":[[11,"dials.algorithms.indexing.model_evaluation.Result",false]],"rmsd_names (dials.algorithms.refinement.target.laueleastsquaresresidualwithrmsdcutoff attribute)":[[14,"dials.algorithms.refinement.target.LaueLeastSquaresResidualWithRmsdCutoff.rmsd_names",false]],"rmsd_names (dials.algorithms.refinement.target.target attribute)":[[14,"dials.algorithms.refinement.target.Target.rmsd_names",false]],"rmsd_names (dials.algorithms.refinement.target.tofleastsquaresresidualwithrmsdcutoff attribute)":[[14,"dials.algorithms.refinement.target.TOFLeastSquaresResidualWithRmsdCutoff.rmsd_names",false]],"rmsd_names (dials.algorithms.refinement.target_stills.leastsquaresstillsresidualwithrmsdcutoff attribute)":[[14,"dials.algorithms.refinement.target_stills.LeastSquaresStillsResidualWithRmsdCutoff.rmsd_names",false]],"rmsd_units (dials.algorithms.refinement.target.laueleastsquaresresidualwithrmsdcutoff attribute)":[[14,"dials.algorithms.refinement.target.LaueLeastSquaresResidualWithRmsdCutoff.rmsd_units",false]],"rmsd_units (dials.algorithms.refinement.target.target attribute)":[[14,"dials.algorithms.refinement.target.Target.rmsd_units",false]],"rmsd_units (dials.algorithms.refinement.target.tofleastsquaresresidualwithrmsdcutoff attribute)":[[14,"dials.algorithms.refinement.target.TOFLeastSquaresResidualWithRmsdCutoff.rmsd_units",false]],"rmsd_units (dials.algorithms.refinement.target_stills.leastsquaresstillsresidualwithrmsdcutoff attribute)":[[14,"dials.algorithms.refinement.target_stills.LeastSquaresStillsResidualWithRmsdCutoff.rmsd_units",false]],"rmsds (dials.algorithms.indexing.model_evaluation.result attribute)":[[11,"dials.algorithms.indexing.model_evaluation.Result.rmsds",false]],"rmsds() (dials.algorithms.refinement.refiner.refiner method)":[[14,"dials.algorithms.refinement.refiner.Refiner.rmsds",false]],"rmsds() (dials.algorithms.refinement.target.target method)":[[14,"dials.algorithms.refinement.target.Target.rmsds",false]],"rmsds_for_experiment() (dials.algorithms.refinement.target.target method)":[[14,"dials.algorithms.refinement.target.Target.rmsds_for_experiment",false]],"rmsds_for_panel() (dials.algorithms.refinement.target.target method)":[[14,"dials.algorithms.refinement.target.Target.rmsds_for_panel",false]],"rmsds_for_reflection_table() (dials.algorithms.refinement.refiner.refiner method)":[[14,"dials.algorithms.refinement.refiner.Refiner.rmsds_for_reflection_table",false]],"rmsds_for_reflection_table() (dials.algorithms.refinement.target.target method)":[[14,"dials.algorithms.refinement.target.Target.rmsds_for_reflection_table",false]],"rotate_around_origin() (dxtbx.model.detector method)":[[23,"dxtbx.model.Detector.rotate_around_origin",false]],"rotate_around_origin() (dxtbx.model.goniometer.goniometer method)":[[25,"dxtbx.model.goniometer.Goniometer.rotate_around_origin",false]],"rotate_crystal() (in module dials.util.export_mtz)":[[33,"dials.util.export_mtz.rotate_crystal",false]],"rotation_matrix_differences() (in module dials.algorithms.indexing.compare_orientation_matrices)":[[11,"dials.algorithms.indexing.compare_orientation_matrices.rotation_matrix_differences",false]],"rotation_scan_manager() (dials.algorithms.refinement.reflection_manager.reflectionmanagerfactory static method)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManagerFactory.rotation_scan_manager",false]],"run() (dials.algorithms.refinement.engine.gaussnewtoniterations method)":[[14,"dials.algorithms.refinement.engine.GaussNewtonIterations.run",false]],"run() (dials.algorithms.refinement.engine.lbfgscurvs method)":[[14,"dials.algorithms.refinement.engine.LBFGScurvs.run",false]],"run() (dials.algorithms.refinement.engine.levenbergmarquardtiterations method)":[[14,"dials.algorithms.refinement.engine.LevenbergMarquardtIterations.run",false]],"run() (dials.algorithms.refinement.engine.refinery method)":[[14,"dials.algorithms.refinement.engine.Refinery.run",false]],"run() (dials.algorithms.refinement.engine.simplelbfgs method)":[[14,"dials.algorithms.refinement.engine.SimpleLBFGS.run",false]],"run() (dials.algorithms.refinement.refiner.refiner method)":[[14,"dials.algorithms.refinement.refiner.Refiner.run",false]],"run() (dials.algorithms.scaling.outlier_rejection.outlierrejectionbase method)":[[15,"dials.algorithms.scaling.outlier_rejection.OutlierRejectionBase.run",false]],"run() (dials.algorithms.spot_finding.factory.backgroundgradientfilter method)":[[16,"dials.algorithms.spot_finding.factory.BackgroundGradientFilter.run",false]],"run() (dials.algorithms.spot_finding.factory.peakcentroiddistancefilter method)":[[16,"dials.algorithms.spot_finding.factory.PeakCentroidDistanceFilter.run",false]],"run() (dials.algorithms.spot_finding.factory.spotdensityfilter method)":[[16,"dials.algorithms.spot_finding.factory.SpotDensityFilter.run",false]],"run() (dials.algorithms.symmetry.cosym.cosymanalysis method)":[[18,"dials.algorithms.symmetry.cosym.CosymAnalysis.run",false]],"run_lbfgs() (dials.algorithms.refinement.engine.adaptlbfgs method)":[[14,"dials.algorithms.refinement.engine.AdaptLbfgs.run_lbfgs",false]],"scaling_models() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.scaling_models",false]],"scalingmodelbase (class in dials.algorithms.scaling.model.model)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase",false]],"scanfactory (class in dxtbx.model.scan)":[[29,"dxtbx.model.scan.ScanFactory",false]],"scans() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.scans",false]],"scanvaryingrefiner (class in dials.algorithms.refinement.refiner)":[[14,"dials.algorithms.refinement.refiner.ScanVaryingRefiner",false]],"score_by_fraction_indexed() (dials.algorithms.indexing.model_evaluation.modelrankweighted method)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRankWeighted.score_by_fraction_indexed",false]],"score_by_rmsd_xy() (dials.algorithms.indexing.model_evaluation.modelrankweighted method)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRankWeighted.score_by_rmsd_xy",false]],"score_by_volume() (dials.algorithms.indexing.model_evaluation.modelrankweighted method)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRankWeighted.score_by_volume",false]],"score_vectors() (dials.algorithms.indexing.basis_vector_search.realspacegridsearch method)":[[11,"dials.algorithms.indexing.basis_vector_search.RealSpaceGridSearch.score_vectors",false]],"scorecorrelationcoefficient (class in dials.algorithms.symmetry.laue_group)":[[18,"dials.algorithms.symmetry.laue_group.ScoreCorrelationCoefficient",false]],"scoresubgroup (class in dials.algorithms.symmetry.cosym)":[[18,"dials.algorithms.symmetry.cosym.ScoreSubGroup",false]],"scoresubgroup (class in dials.algorithms.symmetry.laue_group)":[[18,"dials.algorithms.symmetry.laue_group.ScoreSubGroup",false]],"scoresymmetryelement (class in dials.algorithms.symmetry.cosym)":[[18,"dials.algorithms.symmetry.cosym.ScoreSymmetryElement",false]],"scoresymmetryelement (class in dials.algorithms.symmetry.laue_group)":[[18,"dials.algorithms.symmetry.laue_group.ScoreSymmetryElement",false]],"search() (dxtbx.model.scan.scanfactory static method)":[[29,"dxtbx.model.scan.ScanFactory.search",false]],"search_directions (dials.algorithms.indexing.basis_vector_search.realspacegridsearch property)":[[11,"dials.algorithms.indexing.basis_vector_search.RealSpaceGridSearch.search_directions",false]],"search_vectors (dials.algorithms.indexing.basis_vector_search.realspacegridsearch property)":[[11,"dials.algorithms.indexing.basis_vector_search.RealSpaceGridSearch.search_vectors",false]],"select_on_experiment_identifiers() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.select_on_experiment_identifiers",false]],"selection_used_for_refinement() (dials.algorithms.refinement.refiner.refiner method)":[[14,"dials.algorithms.refinement.refiner.Refiner.selection_used_for_refinement",false]],"sensor() (dxtbx.model.detector.detectorfactory static method)":[[23,"dxtbx.model.detector.DetectorFactory.sensor",false]],"set_angles() (dxtbx.model.goniometer.multiaxisgoniometer method)":[[25,"dxtbx.model.goniometer.MultiAxisGoniometer.set_angles",false]],"set_axes() (dxtbx.model.goniometer.multiaxisgoniometer method)":[[25,"dxtbx.model.goniometer.MultiAxisGoniometer.set_axes",false]],"set_beam() (dxtbx.imageset.imagesequence method)":[[26,"dxtbx.imageset.ImageSequence.set_beam",false]],"set_beam() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.set_beam",false]],"set_beam() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.set_beam",false]],"set_cholesky_factor() (dials.algorithms.refinement.engine.adaptlstbx method)":[[14,"dials.algorithms.refinement.engine.AdaptLstbx.set_cholesky_factor",false]],"set_detector() (dxtbx.imageset.imagesequence method)":[[26,"dxtbx.imageset.ImageSequence.set_detector",false]],"set_detector() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.set_detector",false]],"set_detector() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.set_detector",false]],"set_dimensions() (dials.algorithms.symmetry.cosym.target.target method)":[[18,"dials.algorithms.symmetry.cosym.target.Target.set_dimensions",false]],"set_domain_size_ang() (dxtbx.model.mosaiccrystalsauter2014 method)":[[22,"dxtbx.model.MosaicCrystalSauter2014.set_domain_size_ang",false]],"set_error_model() (dials.algorithms.scaling.model.model.scalingmodelbase method)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.set_error_model",false]],"set_fixed_rotation() (dxtbx.model.goniometer.goniometer method)":[[25,"dxtbx.model.goniometer.Goniometer.set_fixed_rotation",false]],"set_format_class() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.set_format_class",false]],"set_goniometer() (dxtbx.imageset.imagesequence method)":[[26,"dxtbx.imageset.ImageSequence.set_goniometer",false]],"set_goniometer() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.set_goniometer",false]],"set_goniometer() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.set_goniometer",false]],"set_half_mosaicity_deg() (dxtbx.model.mosaiccrystalsauter2014 method)":[[22,"dxtbx.model.MosaicCrystalSauter2014.set_half_mosaicity_deg",false]],"set_last_cell() (dials.algorithms.refinement.engine.journal method)":[[14,"dials.algorithms.refinement.engine.Journal.set_last_cell",false]],"set_mosaicity() (dxtbx.model.mosaiccrystalkabsch2010 method)":[[22,"dxtbx.model.MosaicCrystalKabsch2010.set_mosaicity",false]],"set_nproc() (dials.algorithms.refinement.engine.disablempmixin method)":[[14,"dials.algorithms.refinement.engine.DisableMPmixin.set_nproc",false]],"set_nproc() (dials.algorithms.refinement.engine.refinery method)":[[14,"dials.algorithms.refinement.engine.Refinery.set_nproc",false]],"set_params() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.set_params",false]],"set_rotation_axis() (dxtbx.model.goniometer.goniometer method)":[[25,"dxtbx.model.goniometer.Goniometer.set_rotation_axis",false]],"set_rotation_axis_datum() (dxtbx.model.goniometer.goniometer method)":[[25,"dxtbx.model.goniometer.Goniometer.set_rotation_axis_datum",false]],"set_scaling_model_as_scaled() (dials.algorithms.scaling.model.model.scalingmodelbase method)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.set_scaling_model_as_scaled",false]],"set_scaling_model_as_unscaled() (dials.algorithms.scaling.model.model.scalingmodelbase method)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.set_scaling_model_as_unscaled",false]],"set_scan() (dxtbx.imageset.imagesequence method)":[[26,"dxtbx.imageset.ImageSequence.set_scan",false]],"set_scan() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.set_scan",false]],"set_scan() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.set_scan",false]],"set_setting_rotation() (dxtbx.model.goniometer.goniometer method)":[[25,"dxtbx.model.goniometer.Goniometer.set_setting_rotation",false]],"set_setting_rotation_at_scan_points() (dxtbx.model.goniometer.goniometer method)":[[25,"dxtbx.model.goniometer.Goniometer.set_setting_rotation_at_scan_points",false]],"set_shoebox_background_value() (in module dials.algorithms.background)":[[10,"dials.algorithms.background.set_shoebox_background_value",false]],"set_template() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.set_template",false]],"set_valid_image_range() (dials.algorithms.scaling.model.model.scalingmodelbase method)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.set_valid_image_range",false]],"set_vendor() (dxtbx.imageset.imagesetdata method)":[[26,"dxtbx.imageset.ImageSetData.set_vendor",false]],"setup_indexing() (dials.algorithms.indexing.indexer.indexer method)":[[11,"dials.algorithms.indexing.indexer.Indexer.setup_indexing",false]],"setup_mu() (dials.algorithms.refinement.engine.levenbergmarquardtiterations method)":[[14,"dials.algorithms.refinement.engine.LevenbergMarquardtIterations.setup_mu",false]],"shoebox_memory() (dials.algorithms.integration.integrator.joblist method)":[[12,"dials.algorithms.integration.integrator.JobList.shoebox_memory",false]],"shoeboxes_to_reflection_table() (in module dials.algorithms.spot_finding.finder)":[[16,"dials.algorithms.spot_finding.finder.shoeboxes_to_reflection_table",false]],"show() (dxtbx.model.crystal method)":[[22,"dxtbx.model.Crystal.show",false]],"show_experiments() (dials.algorithms.indexing.indexer.indexer method)":[[11,"dials.algorithms.indexing.indexer.Indexer.show_experiments",false]],"simple() (dxtbx.model.beam.beamfactory static method)":[[21,"dxtbx.model.beam.BeamFactory.simple",false]],"simple() (dxtbx.model.detector.detectorfactory static method)":[[23,"dxtbx.model.detector.DetectorFactory.simple",false]],"simple_directional() (dxtbx.model.beam.beamfactory static method)":[[21,"dxtbx.model.beam.BeamFactory.simple_directional",false]],"simplebackgroundext (class in dials.extensions.simple_background_ext)":[[31,"dials.extensions.simple_background_ext.SimpleBackgroundExt",false]],"simplecentroidext (class in dials.extensions.simple_centroid_ext)":[[31,"dials.extensions.simple_centroid_ext.SimpleCentroidExt",false]],"simplelbfgs (class in dials.algorithms.refinement.engine)":[[14,"dials.algorithms.refinement.engine.SimpleLBFGS",false]],"simplenormdevoutlierrejection (class in dials.algorithms.scaling.outlier_rejection)":[[15,"dials.algorithms.scaling.outlier_rejection.SimpleNormDevOutlierRejection",false]],"single_axis() (dxtbx.model.goniometer.goniometerfactory static method)":[[25,"dxtbx.model.goniometer.GoniometerFactory.single_axis",false]],"single_axis_goniometer_from_phil() (dxtbx.model.goniometer.goniometerfactory static method)":[[25,"dxtbx.model.goniometer.GoniometerFactory.single_axis_goniometer_from_phil",false]],"single_axis_reverse() (dxtbx.model.goniometer.goniometerfactory static method)":[[25,"dxtbx.model.goniometer.GoniometerFactory.single_axis_reverse",false]],"single_file() (dxtbx.model.scan.scanfactory static method)":[[29,"dxtbx.model.scan.ScanFactory.single_file",false]],"size() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.size",false]],"source_packages (dials.util.installer.installer attribute)":[[33,"dials.util.installer.installer.source_packages",false]],"sparsegradientsmixin (class in dials.algorithms.refinement.target)":[[14,"dials.algorithms.refinement.target.SparseGradientsMixin",false]],"split() (dials.algorithms.integration.integrator.joblist method)":[[12,"dials.algorithms.integration.integrator.JobList.split",false]],"split() (dials.algorithms.integration.integrator.reflectionmanager method)":[[12,"dials.algorithms.integration.integrator.ReflectionManager.split",false]],"split_jacobian_into_blocks() (dials.algorithms.refinement.engine.refinery method)":[[14,"dials.algorithms.refinement.engine.Refinery.split_jacobian_into_blocks",false]],"split_matches_into_blocks() (dials.algorithms.refinement.target.target method)":[[14,"dials.algorithms.refinement.target.Target.split_matches_into_blocks",false]],"spotdensityfilter (class in dials.algorithms.spot_finding.factory)":[[16,"dials.algorithms.spot_finding.factory.SpotDensityFilter",false]],"spotfinder (class in dials.algorithms.spot_finding.finder)":[[16,"dials.algorithms.spot_finding.finder.SpotFinder",false]],"spotfinderfactory (class in dials.algorithms.spot_finding.factory)":[[16,"dials.algorithms.spot_finding.factory.SpotFinderFactory",false]],"stars (dials.algorithms.symmetry.cosym.scoresubgroup property)":[[18,"dials.algorithms.symmetry.cosym.ScoreSubGroup.stars",false]],"stars (dials.algorithms.symmetry.cosym.scoresymmetryelement property)":[[18,"dials.algorithms.symmetry.cosym.ScoreSymmetryElement.stars",false]],"start() (dials.util.command_line.command class method)":[[33,"dials.util.command_line.Command.start",false]],"statisticalweightingstrategy (class in dials.algorithms.refinement.weighting_strategies)":[[14,"dials.algorithms.refinement.weighting_strategies.StatisticalWeightingStrategy",false]],"step_backward() (dials.algorithms.refinement.engine.adaptlstbx method)":[[14,"dials.algorithms.refinement.engine.AdaptLstbx.step_backward",false]],"step_forward() (dials.algorithms.refinement.engine.adaptlstbx method)":[[14,"dials.algorithms.refinement.engine.AdaptLstbx.step_forward",false]],"step_threshold (dials.algorithms.refinement.engine.gaussnewtoniterations attribute)":[[14,"dials.algorithms.refinement.engine.GaussNewtonIterations.step_threshold",false]],"stills_manager() (dials.algorithms.refinement.reflection_manager.reflectionmanagerfactory static method)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManagerFactory.stills_manager",false]],"stillsindexer (class in dials.algorithms.indexing.stills_indexer)":[[11,"dials.algorithms.indexing.stills_indexer.StillsIndexer",false]],"stillsindexerbasisvectorsearch (class in dials.algorithms.indexing.stills_indexer)":[[11,"dials.algorithms.indexing.stills_indexer.StillsIndexerBasisVectorSearch",false]],"stillsindexerknownorientation (class in dials.algorithms.indexing.stills_indexer)":[[11,"dials.algorithms.indexing.stills_indexer.StillsIndexerKnownOrientation",false]],"stillsindexerlatticesearch (class in dials.algorithms.indexing.stills_indexer)":[[11,"dials.algorithms.indexing.stills_indexer.StillsIndexerLatticeSearch",false]],"stillsreflectionmanager (class in dials.algorithms.refinement.reflection_manager)":[[14,"dials.algorithms.refinement.reflection_manager.StillsReflectionManager",false]],"stillsweightingstrategy (class in dials.algorithms.refinement.weighting_strategies)":[[14,"dials.algorithms.refinement.weighting_strategies.StillsWeightingStrategy",false]],"strategy (class in dials.algorithms.indexing.basis_vector_search)":[[11,"dials.algorithms.indexing.basis_vector_search.Strategy",false]],"strategy (class in dials.algorithms.indexing.lattice_search)":[[11,"dials.algorithms.indexing.lattice_search.Strategy",false]],"strategy (class in dials.algorithms.indexing.model_evaluation)":[[11,"dials.algorithms.indexing.model_evaluation.Strategy",false]],"subgroups_table() (dials.algorithms.symmetry.cosym.symmetryanalysis static method)":[[18,"dials.algorithms.symmetry.cosym.SymmetryAnalysis.subgroups_table",false]],"summary() (dials.algorithms.integration.integrator.integrator method)":[[12,"dials.algorithms.integration.integrator.Integrator.summary",false]],"summary() (dials.algorithms.integration.integrator.integrator3dthreaded method)":[[12,"dials.algorithms.integration.integrator.Integrator3DThreaded.summary",false]],"summary_table() (dials.algorithms.symmetry.cosym.symmetryanalysis static method)":[[18,"dials.algorithms.symmetry.cosym.SymmetryAnalysis.summary_table",false]],"sym_ops_table() (dials.algorithms.symmetry.cosym.symmetryanalysis static method)":[[18,"dials.algorithms.symmetry.cosym.SymmetryAnalysis.sym_ops_table",false]],"symmetry_base (class in dials.algorithms.symmetry)":[[18,"dials.algorithms.symmetry.symmetry_base",false]],"symmetryanalysis (class in dials.algorithms.symmetry.cosym)":[[18,"dials.algorithms.symmetry.cosym.SymmetryAnalysis",false]],"symmetryhandler (class in dials.algorithms.indexing.symmetry)":[[11,"dials.algorithms.indexing.symmetry.SymmetryHandler",false]],"system_phil (dials.util.options.argumentparser property)":[[33,"dials.util.options.ArgumentParser.system_phil",false]],"system_phil (dials.util.options.philcommandparser property)":[[33,"dials.util.options.PhilCommandParser.system_phil",false]],"target (class in dials.algorithms.refinement.target)":[[14,"dials.algorithms.refinement.target.Target",false]],"target (class in dials.algorithms.symmetry.cosym.target)":[[18,"dials.algorithms.symmetry.cosym.target.Target",false]],"targetedoutlierrejection (class in dials.algorithms.scaling.outlier_rejection)":[[15,"dials.algorithms.scaling.outlier_rejection.TargetedOutlierRejection",false]],"targetfactory (class in dials.algorithms.refinement.target)":[[14,"dials.algorithms.refinement.target.TargetFactory",false]],"tau (dials.algorithms.refinement.engine.levenbergmarquardtiterations attribute)":[[14,"dials.algorithms.refinement.engine.LevenbergMarquardtIterations.tau",false]],"test_for_termination() (dials.algorithms.refinement.engine.refinery method)":[[14,"dials.algorithms.refinement.engine.Refinery.test_for_termination",false]],"test_objective_increasing_but_not_nref() (dials.algorithms.refinement.engine.refinery method)":[[14,"dials.algorithms.refinement.engine.Refinery.test_objective_increasing_but_not_nref",false]],"test_rmsd_convergence() (dials.algorithms.refinement.engine.refinery method)":[[14,"dials.algorithms.refinement.engine.Refinery.test_rmsd_convergence",false]],"to_crystal() (in module dxtbx.serialize.xds)":[[30,"dxtbx.serialize.xds.to_crystal",false]],"to_dict() (dials.algorithms.scaling.model.model.scalingmodelbase method)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.to_dict",false]],"to_dict() (dxtbx.model.crystal method)":[[22,"dxtbx.model.Crystal.to_dict",false]],"to_dict() (dxtbx.model.detector method)":[[23,"dxtbx.model.Detector.to_dict",false]],"to_dict() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.to_dict",false]],"to_dict() (dxtbx.model.goniometer.goniometer method)":[[25,"dxtbx.model.goniometer.Goniometer.to_dict",false]],"to_dict() (dxtbx.model.goniometer.multiaxisgoniometer method)":[[25,"dxtbx.model.goniometer.MultiAxisGoniometer.to_dict",false]],"to_dict() (dxtbx.model.mosaiccrystalkabsch2010 method)":[[22,"dxtbx.model.MosaicCrystalKabsch2010.to_dict",false]],"to_dict() (dxtbx.model.mosaiccrystalsauter2014 method)":[[22,"dxtbx.model.MosaicCrystalSauter2014.to_dict",false]],"to_imageset() (in module dxtbx.serialize.xds)":[[30,"dxtbx.serialize.xds.to_imageset",false]],"to_json_file() (dials.algorithms.refinement.engine.journal method)":[[14,"dials.algorithms.refinement.engine.Journal.to_json_file",false]],"to_xds (class in dxtbx.serialize.xds)":[[30,"dxtbx.serialize.xds.to_xds",false]],"tofleastsquaresresidualwithrmsdcutoff (class in dials.algorithms.refinement.target)":[[14,"dials.algorithms.refinement.target.TOFLeastSquaresResidualWithRmsdCutoff",false]],"tofreflectionmanager (class in dials.algorithms.refinement.reflection_manager)":[[14,"dials.algorithms.refinement.reflection_manager.TOFReflectionManager",false]],"tofspotfinder (class in dials.algorithms.spot_finding.finder)":[[16,"dials.algorithms.spot_finding.finder.TOFSpotFinder",false]],"traceback (dials.util.options.argumenthandlingerrorinfo attribute)":[[33,"dials.util.options.ArgumentHandlingErrorInfo.traceback",false]],"trunccauchy_pdf() (in module dials.algorithms.symmetry.laue_group)":[[18,"dials.algorithms.symmetry.laue_group.trunccauchy_pdf",false]],"try_read_experiments() (dials.util.options.importer method)":[[33,"dials.util.options.Importer.try_read_experiments",false]],"try_read_experiments_from_images() (dials.util.options.importer method)":[[33,"dials.util.options.Importer.try_read_experiments_from_images",false]],"try_read_reflections() (dials.util.options.importer method)":[[33,"dials.util.options.Importer.try_read_reflections",false]],"two_theta() (dxtbx.model.detector.detectorfactory static method)":[[23,"dxtbx.model.detector.DetectorFactory.two_theta",false]],"type (dials.util.options.argumenthandlingerrorinfo attribute)":[[33,"dials.util.options.ArgumentHandlingErrorInfo.type",false]],"update() (dials.algorithms.scaling.model.model.arrayscalingmodel method)":[[15,"dials.algorithms.scaling.model.model.ArrayScalingModel.update",false]],"update() (dials.algorithms.scaling.model.model.dosedecay method)":[[15,"dials.algorithms.scaling.model.model.DoseDecay.update",false]],"update() (dials.algorithms.scaling.model.model.kbscalingmodel method)":[[15,"dials.algorithms.scaling.model.model.KBScalingModel.update",false]],"update() (dials.algorithms.scaling.model.model.physicalscalingmodel method)":[[15,"dials.algorithms.scaling.model.model.PhysicalScalingModel.update",false]],"update() (dials.algorithms.scaling.model.model.scalingmodelbase method)":[[15,"dials.algorithms.scaling.model.model.ScalingModelBase.update",false]],"update() (dials.util.command_line.progressbar method)":[[33,"dials.util.command_line.ProgressBar.update",false]],"update() (dials.util.command_line.progressbartimer method)":[[33,"dials.util.command_line.ProgressBarTimer.update",false]],"update_analysis() (dials.algorithms.indexing.model_evaluation.modelrankfilter method)":[[11,"dials.algorithms.indexing.model_evaluation.ModelRankFilter.update_analysis",false]],"update_detector_px_mm_data() (dxtbx.imageset.imagesequence method)":[[26,"dxtbx.imageset.ImageSequence.update_detector_px_mm_data",false]],"update_detector_px_mm_data() (dxtbx.imageset.imageset method)":[[26,"dxtbx.imageset.ImageSet.update_detector_px_mm_data",false]],"update_journal() (dials.algorithms.refinement.engine.refinery method)":[[14,"dials.algorithms.refinement.engine.Refinery.update_journal",false]],"update_matches() (dials.algorithms.refinement.target.target method)":[[14,"dials.algorithms.refinement.target.Target.update_matches",false]],"update_residuals() (dials.algorithms.refinement.reflection_manager.lauereflectionmanager method)":[[14,"dials.algorithms.refinement.reflection_manager.LaueReflectionManager.update_residuals",false]],"update_residuals() (dials.algorithms.refinement.reflection_manager.reflectionmanager method)":[[14,"dials.algorithms.refinement.reflection_manager.ReflectionManager.update_residuals",false]],"update_residuals() (dials.algorithms.refinement.reflection_manager.tofreflectionmanager method)":[[14,"dials.algorithms.refinement.reflection_manager.TOFReflectionManager.update_residuals",false]],"validation (dials.util.options.argumenthandlingerrorinfo attribute)":[[33,"dials.util.options.ArgumentHandlingErrorInfo.validation",false]],"warn_if_setting_unused_refinement_protocol_params() (dials.algorithms.indexing.stills_indexer.stillsindexer method)":[[11,"dials.algorithms.indexing.stills_indexer.StillsIndexer.warn_if_setting_unused_refinement_protocol_params",false]],"wavelengthgroup (class in dials.util.export_mtz)":[[33,"dials.util.export_mtz.WavelengthGroup",false]],"wavelengths (dials.util.export_mtz.wavelengthgroup attribute)":[[33,"dials.util.export_mtz.WavelengthGroup.wavelengths",false]],"weight() (dials.algorithms.background.radialaverage method)":[[10,"dials.algorithms.background.RadialAverage.weight",false]],"weighted_mean (dials.util.export_mtz.wavelengthgroup attribute)":[[33,"dials.util.export_mtz.WavelengthGroup.weighted_mean",false]],"where() (dxtbx.model.experimentlist method)":[[24,"dxtbx.model.ExperimentList.where",false]],"write_columns() (in module dials.util.export_mtz)":[[33,"dials.util.export_mtz.write_columns",false]],"xds_detector_name() (in module dxtbx.serialize.xds)":[[30,"dxtbx.serialize.xds.xds_detector_name",false]],"xds_inp() (dxtbx.serialize.xds.to_xds method)":[[30,"dxtbx.serialize.xds.to_xds.XDS_INP",false]],"xparm_xds() (dxtbx.serialize.xds.to_xds method)":[[30,"dxtbx.serialize.xds.to_xds.xparm_xds",false]]},"objects":{"dials.algorithms":[[10,0,0,"-","background"],[11,0,0,"-","indexing"],[13,0,0,"-","profile_model"],[15,0,0,"-","scaling"],[18,0,0,"-","symmetry"]],"dials.algorithms.background":[[10,1,1,"","RadialAverage"],[10,3,1,"","set_shoebox_background_value"]],"dials.algorithms.background.RadialAverage":[[10,2,1,"","__init__"],[10,2,1,"","add"],[10,2,1,"","inv_d2"],[10,2,1,"","mean"],[10,2,1,"","weight"]],"dials.algorithms.indexing":[[11,4,1,"","DialsIndexError"],[11,4,1,"","DialsIndexRefineError"],[11,0,0,"-","assign_indices"],[11,0,0,"-","basis_vector_search"],[11,0,0,"-","compare_orientation_matrices"],[11,0,0,"-","indexer"],[11,0,0,"-","lattice_search"],[11,0,0,"-","max_cell"],[11,0,0,"-","model_evaluation"],[11,0,0,"-","nearest_neighbor"],[11,0,0,"-","refinement"],[11,0,0,"-","stills_indexer"],[11,0,0,"-","symmetry"]],"dials.algorithms.indexing.assign_indices":[[11,1,1,"","AssignIndicesGlobal"],[11,1,1,"","AssignIndicesLocal"],[11,1,1,"","AssignIndicesStrategy"]],"dials.algorithms.indexing.assign_indices.AssignIndicesGlobal":[[11,2,1,"","__init__"]],"dials.algorithms.indexing.assign_indices.AssignIndicesLocal":[[11,2,1,"","__init__"]],"dials.algorithms.indexing.assign_indices.AssignIndicesStrategy":[[11,2,1,"","__init__"]],"dials.algorithms.indexing.basis_vector_search":[[11,1,1,"","FFT1D"],[11,1,1,"","FFT3D"],[11,1,1,"","RealSpaceGridSearch"],[11,1,1,"","Strategy"],[11,0,0,"-","combinations"],[11,0,0,"-","optimise"]],"dials.algorithms.indexing.basis_vector_search.FFT1D":[[11,2,1,"","__init__"],[11,2,1,"","find_basis_vectors"],[11,5,1,"","phil_help"],[11,5,1,"","phil_scope"]],"dials.algorithms.indexing.basis_vector_search.FFT3D":[[11,2,1,"","__init__"],[11,2,1,"","find_basis_vectors"],[11,5,1,"","phil_help"],[11,5,1,"","phil_scope"]],"dials.algorithms.indexing.basis_vector_search.RealSpaceGridSearch":[[11,2,1,"","__init__"],[11,2,1,"","compute_functional"],[11,2,1,"","find_basis_vectors"],[11,5,1,"","phil_help"],[11,5,1,"","phil_scope"],[11,2,1,"","score_vectors"],[11,6,1,"","search_directions"],[11,6,1,"","search_vectors"]],"dials.algorithms.indexing.basis_vector_search.Strategy":[[11,2,1,"","__init__"],[11,2,1,"","find_basis_vectors"],[11,5,1,"","phil_help"],[11,5,1,"","phil_scope"]],"dials.algorithms.indexing.basis_vector_search.combinations":[[11,3,1,"","candidate_orientation_matrices"],[11,3,1,"","filter_known_symmetry"],[11,3,1,"","filter_similar_orientations"]],"dials.algorithms.indexing.basis_vector_search.optimise":[[11,1,1,"","BasisVectorMinimiser"],[11,1,1,"","BasisVectorTarget"],[11,3,1,"","optimise_basis_vectors"]],"dials.algorithms.indexing.basis_vector_search.optimise.BasisVectorMinimiser":[[11,2,1,"","__init__"],[11,2,1,"","compute_functional_and_gradients"]],"dials.algorithms.indexing.basis_vector_search.optimise.BasisVectorTarget":[[11,2,1,"","__init__"],[11,2,1,"","compute_functional"],[11,2,1,"","compute_functional_and_gradients"]],"dials.algorithms.indexing.compare_orientation_matrices":[[11,3,1,"","difference_rotation_matrix_axis_angle"],[11,3,1,"","rotation_matrix_differences"]],"dials.algorithms.indexing.indexer":[[11,1,1,"","Indexer"],[11,3,1,"","apply_hkl_offset"]],"dials.algorithms.indexing.indexer.Indexer":[[11,2,1,"","__init__"],[11,2,1,"","export_as_json"],[11,2,1,"","export_reflections"],[11,2,1,"","find_lattices"],[11,2,1,"","find_max_cell"],[11,2,1,"","from_parameters"],[11,2,1,"","index"],[11,2,1,"","index_reflections"],[11,2,1,"","refine"],[11,2,1,"","setup_indexing"],[11,2,1,"","show_experiments"]],"dials.algorithms.indexing.lattice_search":[[11,1,1,"","FfbIndexer"],[11,1,1,"","LowResSpotMatch"],[11,1,1,"","PinkIndexer"],[11,1,1,"","Strategy"]],"dials.algorithms.indexing.lattice_search.FfbIndexer":[[11,2,1,"","__init__"],[11,2,1,"","find_crystal_models"],[11,5,1,"","phil_help"],[11,5,1,"","phil_scope"]],"dials.algorithms.indexing.lattice_search.LowResSpotMatch":[[11,2,1,"","__init__"],[11,2,1,"","find_crystal_models"],[11,5,1,"","phil_help"],[11,5,1,"","phil_scope"]],"dials.algorithms.indexing.lattice_search.PinkIndexer":[[11,2,1,"","__init__"],[11,2,1,"","find_crystal_models"],[11,5,1,"","phil_help"],[11,5,1,"","phil_scope"]],"dials.algorithms.indexing.lattice_search.Strategy":[[11,2,1,"","__init__"],[11,2,1,"","find_crystal_models"],[11,5,1,"","phil_help"],[11,5,1,"","phil_scope"]],"dials.algorithms.indexing.max_cell":[[11,3,1,"","find_max_cell"]],"dials.algorithms.indexing.model_evaluation":[[11,1,1,"","ModelEvaluation"],[11,1,1,"","ModelRank"],[11,1,1,"","ModelRankFilter"],[11,1,1,"","ModelRankWeighted"],[11,1,1,"","Result"],[11,1,1,"","Strategy"],[11,3,1,"","filter_doubled_cell"]],"dials.algorithms.indexing.model_evaluation.ModelEvaluation":[[11,2,1,"","__init__"],[11,2,1,"","evaluate"]],"dials.algorithms.indexing.model_evaluation.ModelRank":[[11,2,1,"","__init__"],[11,2,1,"","append"],[11,2,1,"","best_model"],[11,2,1,"","extend"]],"dials.algorithms.indexing.model_evaluation.ModelRankFilter":[[11,2,1,"","__init__"],[11,2,1,"","append"],[11,2,1,"","best_model"],[11,2,1,"","extend"],[11,2,1,"","filter_by_likelihood"],[11,2,1,"","filter_by_n_indexed"],[11,2,1,"","filter_by_volume"],[11,2,1,"","update_analysis"]],"dials.algorithms.indexing.model_evaluation.ModelRankWeighted":[[11,2,1,"","__init__"],[11,2,1,"","best_model"],[11,2,1,"","combined_scores"],[11,2,1,"","score_by_fraction_indexed"],[11,2,1,"","score_by_rmsd_xy"],[11,2,1,"","score_by_volume"]],"dials.algorithms.indexing.model_evaluation.Result":[[11,5,1,"","crystal"],[11,5,1,"","fraction_indexed"],[11,5,1,"","hkl_offset"],[11,5,1,"","model_likelihood"],[11,5,1,"","n_indexed"],[11,5,1,"","rmsds"]],"dials.algorithms.indexing.model_evaluation.Strategy":[[11,2,1,"","evaluate"]],"dials.algorithms.indexing.nearest_neighbor":[[11,1,1,"","NeighborAnalysis"]],"dials.algorithms.indexing.nearest_neighbor.NeighborAnalysis":[[11,2,1,"","__init__"],[11,2,1,"","plot_histogram"]],"dials.algorithms.indexing.refinement":[[11,3,1,"","refine"]],"dials.algorithms.indexing.stills_indexer":[[11,1,1,"","StillsIndexer"],[11,1,1,"","StillsIndexerBasisVectorSearch"],[11,1,1,"","StillsIndexerKnownOrientation"],[11,1,1,"","StillsIndexerLatticeSearch"],[11,3,1,"","calc_2D_rmsd_and_displacements"],[11,3,1,"","e_refine"],[11,3,1,"","plot_displacements"]],"dials.algorithms.indexing.stills_indexer.StillsIndexer":[[11,2,1,"","__init__"],[11,2,1,"","choose_best_orientation_matrix"],[11,2,1,"","experiment_list_for_crystal"],[11,2,1,"","identify_outliers"],[11,2,1,"","index"],[11,2,1,"","refine"],[11,2,1,"","warn_if_setting_unused_refinement_protocol_params"]],"dials.algorithms.indexing.symmetry":[[11,1,1,"","SymmetryHandler"],[11,3,1,"","calc_acentric_subgroups"],[11,3,1,"","find_matching_symmetry"],[11,3,1,"","groups_cache"],[11,3,1,"","metric_supergroup"]],"dials.algorithms.indexing.symmetry.SymmetryHandler":[[11,2,1,"","__init__"],[11,2,1,"","apply_symmetry"]],"dials.algorithms.integration":[[12,0,0,"-","integrator"]],"dials.algorithms.integration.integrator":[[12,1,1,"","Executor"],[12,1,1,"","Integrator"],[12,1,1,"","Integrator2D"],[12,1,1,"","Integrator3D"],[12,1,1,"","Integrator3DThreaded"],[12,1,1,"","IntegratorExecutor"],[12,1,1,"","IntegratorFlat3D"],[12,1,1,"","IntegratorSingle2D"],[12,1,1,"","IntegratorStills"],[12,1,1,"","JobList"],[12,1,1,"","Parameters"],[12,1,1,"","Processor2D"],[12,1,1,"","Processor3D"],[12,1,1,"","ProcessorFlat3D"],[12,1,1,"","ProcessorSingle2D"],[12,1,1,"","ProcessorStills"],[12,1,1,"","ProfileModellerExecutor"],[12,1,1,"","ProfileValidatorExecutor"],[12,1,1,"","ReflectionManager"],[12,3,1,"","frame_hist"],[12,3,1,"","generate_phil_scope"],[12,3,1,"","hist"],[12,3,1,"","nframes_hist"]],"dials.algorithms.integration.integrator.Executor":[[12,2,1,"","__init__"],[12,2,1,"","process"]],"dials.algorithms.integration.integrator.Integrator":[[12,2,1,"","__init__"],[12,2,1,"","fit_profiles"],[12,2,1,"","integrate"],[12,2,1,"","report"],[12,2,1,"","summary"]],"dials.algorithms.integration.integrator.Integrator2D":[[12,5,1,"","ProcessorClass"],[12,2,1,"","finalize_reflections"],[12,2,1,"","initialize_reflections"]],"dials.algorithms.integration.integrator.Integrator3D":[[12,5,1,"","ProcessorClass"],[12,2,1,"","finalize_reflections"],[12,2,1,"","initialize_reflections"]],"dials.algorithms.integration.integrator.Integrator3DThreaded":[[12,2,1,"","__init__"],[12,2,1,"","finalise"],[12,2,1,"","initialise"],[12,2,1,"","integrate"],[12,2,1,"","report"],[12,2,1,"","summary"]],"dials.algorithms.integration.integrator.IntegratorExecutor":[[12,2,1,"","__init__"],[12,2,1,"","data"],[12,2,1,"","finalize"],[12,2,1,"","initialize"],[12,2,1,"","process"]],"dials.algorithms.integration.integrator.IntegratorFlat3D":[[12,5,1,"","ProcessorClass"],[12,2,1,"","finalize_reflections"],[12,2,1,"","initialize_reflections"]],"dials.algorithms.integration.integrator.IntegratorSingle2D":[[12,5,1,"","ProcessorClass"],[12,2,1,"","finalize_reflections"],[12,2,1,"","initialize_reflections"]],"dials.algorithms.integration.integrator.IntegratorStills":[[12,5,1,"","ProcessorClass"],[12,2,1,"","finalize_reflections"],[12,2,1,"","initialize_reflections"]],"dials.algorithms.integration.integrator.JobList":[[12,2,1,"","__init__"],[12,2,1,"","add"],[12,2,1,"","shoebox_memory"],[12,2,1,"","split"]],"dials.algorithms.integration.integrator.Parameters":[[12,1,1,"","Filter"],[12,1,1,"","Profile"],[12,2,1,"","__init__"],[12,2,1,"","from_phil"]],"dials.algorithms.integration.integrator.Parameters.Filter":[[12,2,1,"","__init__"]],"dials.algorithms.integration.integrator.Parameters.Profile":[[12,1,1,"","Validation"],[12,2,1,"","__init__"]],"dials.algorithms.integration.integrator.Parameters.Profile.Validation":[[12,2,1,"","__init__"]],"dials.algorithms.integration.integrator.Processor2D":[[12,2,1,"","__init__"]],"dials.algorithms.integration.integrator.Processor3D":[[12,2,1,"","__init__"]],"dials.algorithms.integration.integrator.ProcessorFlat3D":[[12,2,1,"","__init__"]],"dials.algorithms.integration.integrator.ProcessorSingle2D":[[12,2,1,"","__init__"]],"dials.algorithms.integration.integrator.ProcessorStills":[[12,2,1,"","__init__"]],"dials.algorithms.integration.integrator.ProfileModellerExecutor":[[12,2,1,"","__init__"],[12,2,1,"","data"],[12,2,1,"","finalize"],[12,2,1,"","initialize"],[12,2,1,"","process"]],"dials.algorithms.integration.integrator.ProfileValidatorExecutor":[[12,2,1,"","__init__"],[12,2,1,"","data"],[12,2,1,"","finalize"],[12,2,1,"","initialize"],[12,2,1,"","process"]],"dials.algorithms.integration.integrator.ReflectionManager":[[12,2,1,"","__init__"],[12,2,1,"","accumulate"],[12,2,1,"","data"],[12,2,1,"","finished"],[12,2,1,"","job"],[12,2,1,"","num_reflections"],[12,2,1,"","split"]],"dials.algorithms.refinement":[[14,0,0,"-","engine"],[14,0,0,"-","refiner"],[14,0,0,"-","reflection_manager"],[14,0,0,"-","target"],[14,0,0,"-","target_stills"],[14,0,0,"-","weighting_strategies"]],"dials.algorithms.refinement.engine":[[14,1,1,"","AdaptLbfgs"],[14,1,1,"","AdaptLstbx"],[14,1,1,"","DisableMPmixin"],[14,1,1,"","GaussNewtonIterations"],[14,1,1,"","Journal"],[14,1,1,"","LBFGScurvs"],[14,1,1,"","LevenbergMarquardtIterations"],[14,1,1,"","Refinery"],[14,1,1,"","SimpleLBFGS"]],"dials.algorithms.refinement.engine.AdaptLbfgs":[[14,2,1,"","__init__"],[14,2,1,"","callback_after_step"],[14,2,1,"","compute_functional_and_gradients"],[14,2,1,"","compute_functional_gradients_and_curvatures"],[14,2,1,"","run_lbfgs"]],"dials.algorithms.refinement.engine.AdaptLstbx":[[14,2,1,"","__init__"],[14,2,1,"","build_up"],[14,2,1,"","calculate_esds"],[14,2,1,"","parameter_vector_norm"],[14,2,1,"","restart"],[14,2,1,"","set_cholesky_factor"],[14,2,1,"","step_backward"],[14,2,1,"","step_forward"]],"dials.algorithms.refinement.engine.DisableMPmixin":[[14,2,1,"","set_nproc"]],"dials.algorithms.refinement.engine.GaussNewtonIterations":[[14,2,1,"","__init__"],[14,5,1,"","convergence_as_shift_over_esd"],[14,5,1,"","damping_value"],[14,5,1,"","gradient_threshold"],[14,5,1,"","max_shift_over_esd"],[14,2,1,"","run"],[14,5,1,"","step_threshold"]],"dials.algorithms.refinement.engine.Journal":[[14,2,1,"","add_column"],[14,2,1,"","add_row"],[14,2,1,"","del_last_row"],[14,2,1,"","from_json_file"],[14,2,1,"","get_nrows"],[14,5,1,"","reason_for_termination"],[14,2,1,"","set_last_cell"],[14,2,1,"","to_json_file"]],"dials.algorithms.refinement.engine.LBFGScurvs":[[14,2,1,"","compute_functional_gradients_diag"],[14,2,1,"","run"]],"dials.algorithms.refinement.engine.LevenbergMarquardtIterations":[[14,2,1,"","add_constant_to_diagonal"],[14,6,1,"","mu"],[14,2,1,"","report_progress"],[14,2,1,"","run"],[14,2,1,"","setup_mu"],[14,5,1,"","tau"]],"dials.algorithms.refinement.engine.Refinery":[[14,2,1,"","__init__"],[14,2,1,"","get_correlation_matrix_for_step"],[14,2,1,"","get_num_steps"],[14,2,1,"","jacobian_condition_number"],[14,2,1,"","prepare_for_step"],[14,2,1,"","run"],[14,2,1,"","set_nproc"],[14,2,1,"","split_jacobian_into_blocks"],[14,2,1,"","test_for_termination"],[14,2,1,"","test_objective_increasing_but_not_nref"],[14,2,1,"","test_rmsd_convergence"],[14,2,1,"","update_journal"]],"dials.algorithms.refinement.engine.SimpleLBFGS":[[14,2,1,"","run"]],"dials.algorithms.refinement.refiner":[[14,1,1,"","Refiner"],[14,1,1,"","RefinerFactory"],[14,1,1,"","ScanVaryingRefiner"]],"dials.algorithms.refinement.refiner.Refiner":[[14,2,1,"","__init__"],[14,2,1,"","calc_exp_rmsd_table"],[14,2,1,"","get_experiments"],[14,2,1,"","get_free_reflections"],[14,2,1,"","get_matches"],[14,2,1,"","get_param_reporter"],[14,2,1,"","get_parameter_correlation_matrix"],[14,6,1,"","history"],[14,2,1,"","predict_for_indexed"],[14,2,1,"","predict_for_reflection_table"],[14,2,1,"","print_exp_rmsd_table"],[14,2,1,"","print_out_of_sample_rmsd_table"],[14,2,1,"","print_panel_rmsd_table"],[14,2,1,"","print_step_table"],[14,2,1,"","rmsds"],[14,2,1,"","rmsds_for_reflection_table"],[14,2,1,"","run"],[14,2,1,"","selection_used_for_refinement"]],"dials.algorithms.refinement.refiner.RefinerFactory":[[14,2,1,"","config_refinery"],[14,2,1,"","config_restraints"],[14,2,1,"","config_sparse"],[14,2,1,"","config_target"],[14,2,1,"","from_parameters_data_experiments"],[14,2,1,"","reflections_after_outlier_rejection"]],"dials.algorithms.refinement.reflection_manager":[[14,1,1,"","BlockCalculator"],[14,1,1,"","LaueReflectionManager"],[14,1,1,"","ReflectionManager"],[14,1,1,"","ReflectionManagerFactory"],[14,1,1,"","StillsReflectionManager"],[14,1,1,"","TOFReflectionManager"]],"dials.algorithms.refinement.reflection_manager.BlockCalculator":[[14,2,1,"","__init__"],[14,2,1,"","per_image"],[14,2,1,"","per_width"]],"dials.algorithms.refinement.reflection_manager.LaueReflectionManager":[[14,2,1,"","__init__"],[14,5,1,"","experiment_type"],[14,2,1,"","print_stats_on_matches"],[14,2,1,"","update_residuals"]],"dials.algorithms.refinement.reflection_manager.ReflectionManager":[[14,2,1,"","__init__"],[14,5,1,"","experiment_type"],[14,2,1,"","filter_obs"],[14,2,1,"","finalise"],[14,2,1,"","get_accepted_refs_size"],[14,2,1,"","get_centroid_analyser"],[14,2,1,"","get_free_reflections"],[14,2,1,"","get_indexed"],[14,2,1,"","get_matches"],[14,2,1,"","get_obs"],[14,2,1,"","get_sample_size"],[14,2,1,"","print_stats_on_matches"],[14,2,1,"","reset_accepted_reflections"],[14,2,1,"","update_residuals"]],"dials.algorithms.refinement.reflection_manager.ReflectionManagerFactory":[[14,2,1,"","from_parameters_reflections_experiments"],[14,2,1,"","get_weighting_strategy_override"],[14,2,1,"","laue_manager"],[14,2,1,"","rotation_scan_manager"],[14,2,1,"","stills_manager"]],"dials.algorithms.refinement.reflection_manager.StillsReflectionManager":[[14,5,1,"","experiment_type"],[14,2,1,"","print_stats_on_matches"]],"dials.algorithms.refinement.reflection_manager.TOFReflectionManager":[[14,2,1,"","__init__"],[14,2,1,"","update_residuals"]],"dials.algorithms.refinement.target":[[14,1,1,"","LaueLeastSquaresResidualWithRmsdCutoff"],[14,1,1,"","LeastSquaresPositionalResidualWithRmsdCutoff"],[14,1,1,"","LeastSquaresPositionalResidualWithRmsdCutoffSparse"],[14,1,1,"","SparseGradientsMixin"],[14,1,1,"","TOFLeastSquaresResidualWithRmsdCutoff"],[14,1,1,"","Target"],[14,1,1,"","TargetFactory"]],"dials.algorithms.refinement.target.LaueLeastSquaresResidualWithRmsdCutoff":[[14,2,1,"","__init__"],[14,2,1,"","achieved"],[14,5,1,"","rmsd_names"],[14,5,1,"","rmsd_units"]],"dials.algorithms.refinement.target.LeastSquaresPositionalResidualWithRmsdCutoff":[[14,2,1,"","__init__"],[14,2,1,"","achieved"]],"dials.algorithms.refinement.target.TOFLeastSquaresResidualWithRmsdCutoff":[[14,5,1,"","rmsd_names"],[14,5,1,"","rmsd_units"]],"dials.algorithms.refinement.target.Target":[[14,2,1,"","__init__"],[14,2,1,"","achieved"],[14,2,1,"","calculate_gradients"],[14,2,1,"","compute_functional_gradients_and_curvatures"],[14,2,1,"","compute_residuals"],[14,2,1,"","compute_residuals_and_gradients"],[14,2,1,"","compute_restraints_functional_gradients_and_curvatures"],[14,2,1,"","compute_restraints_residuals_and_gradients"],[14,6,1,"","dim"],[14,2,1,"","get_num_matches"],[14,2,1,"","get_num_matches_for_experiment"],[14,2,1,"","get_num_matches_for_panel"],[14,2,1,"","predict"],[14,2,1,"","predict_for_free_reflections"],[14,2,1,"","predict_for_reflection_table"],[14,5,1,"","rmsd_names"],[14,5,1,"","rmsd_units"],[14,2,1,"","rmsds"],[14,2,1,"","rmsds_for_experiment"],[14,2,1,"","rmsds_for_panel"],[14,2,1,"","rmsds_for_reflection_table"],[14,2,1,"","split_matches_into_blocks"],[14,2,1,"","update_matches"]],"dials.algorithms.refinement.target.TargetFactory":[[14,2,1,"","from_parameters_and_experiments"]],"dials.algorithms.refinement.target_stills":[[14,1,1,"","LeastSquaresStillsResidualWithRmsdCutoff"],[14,1,1,"","LeastSquaresStillsResidualWithRmsdCutoffSparse"]],"dials.algorithms.refinement.target_stills.LeastSquaresStillsResidualWithRmsdCutoff":[[14,2,1,"","__init__"],[14,2,1,"","achieved"],[14,2,1,"","predict_for_reflection_table"],[14,5,1,"","rmsd_names"],[14,5,1,"","rmsd_units"]],"dials.algorithms.refinement.weighting_strategies":[[14,1,1,"","ConstantWeightingStrategy"],[14,1,1,"","ExternalDelPsiWeightingStrategy"],[14,1,1,"","LaueMixedWeightingStrategy"],[14,1,1,"","LaueStatisticalWeightingStrategy"],[14,1,1,"","StatisticalWeightingStrategy"],[14,1,1,"","StillsWeightingStrategy"]],"dials.algorithms.refinement.weighting_strategies.ConstantWeightingStrategy":[[14,2,1,"","__init__"],[14,2,1,"","calculate_weights"]],"dials.algorithms.refinement.weighting_strategies.ExternalDelPsiWeightingStrategy":[[14,2,1,"","calculate_weights"]],"dials.algorithms.refinement.weighting_strategies.LaueMixedWeightingStrategy":[[14,2,1,"","__init__"],[14,2,1,"","calculate_weights"]],"dials.algorithms.refinement.weighting_strategies.LaueStatisticalWeightingStrategy":[[14,2,1,"","__init__"],[14,2,1,"","calculate_weights"]],"dials.algorithms.refinement.weighting_strategies.StatisticalWeightingStrategy":[[14,2,1,"","calculate_weights"]],"dials.algorithms.refinement.weighting_strategies.StillsWeightingStrategy":[[14,2,1,"","__init__"],[14,2,1,"","calculate_weights"]],"dials.algorithms.scaling":[[15,0,0,"-","outlier_rejection"]],"dials.algorithms.scaling.model":[[15,0,0,"-","model"]],"dials.algorithms.scaling.model.model":[[15,1,1,"","ArrayScalingModel"],[15,1,1,"","DoseDecay"],[15,1,1,"","KBScalingModel"],[15,1,1,"","PhysicalScalingModel"],[15,1,1,"","ScalingModelBase"],[15,3,1,"","calc_n_param_from_bins"],[15,3,1,"","calculate_new_offset"],[15,3,1,"","determine_auto_absorption_params"],[15,3,1,"","initialise_smooth_input"],[15,3,1,"","make_combined_plots"],[15,3,1,"","plot_scaling_models"]],"dials.algorithms.scaling.model.model.ArrayScalingModel":[[15,2,1,"","__init__"],[15,2,1,"","configure_components"],[15,6,1,"","consecutive_refinement_order"],[15,2,1,"","from_data"],[15,2,1,"","from_dict"],[15,5,1,"","id_"],[15,2,1,"","limit_image_range"],[15,5,1,"","phil_scope"],[15,2,1,"","plot_model_components"],[15,2,1,"","update"]],"dials.algorithms.scaling.model.model.DoseDecay":[[15,2,1,"","__init__"],[15,2,1,"","configure_components"],[15,6,1,"","consecutive_refinement_order"],[15,2,1,"","fix_initial_parameter"],[15,2,1,"","from_data"],[15,2,1,"","from_dict"],[15,2,1,"","get_shared_components"],[15,5,1,"","id_"],[15,2,1,"","limit_image_range"],[15,5,1,"","phil_scope"],[15,2,1,"","plot_model_components"],[15,2,1,"","update"]],"dials.algorithms.scaling.model.model.KBScalingModel":[[15,2,1,"","__init__"],[15,2,1,"","configure_components"],[15,6,1,"","consecutive_refinement_order"],[15,2,1,"","from_data"],[15,2,1,"","from_dict"],[15,5,1,"","id_"],[15,5,1,"","phil_scope"],[15,2,1,"","update"]],"dials.algorithms.scaling.model.model.PhysicalScalingModel":[[15,2,1,"","__init__"],[15,2,1,"","configure_components"],[15,6,1,"","consecutive_refinement_order"],[15,2,1,"","fix_initial_parameter"],[15,2,1,"","from_data"],[15,2,1,"","from_dict"],[15,2,1,"","get_shared_components"],[15,5,1,"","id_"],[15,2,1,"","limit_image_range"],[15,5,1,"","phil_scope"],[15,2,1,"","plot_model_components"],[15,2,1,"","update"]],"dials.algorithms.scaling.model.model.ScalingModelBase":[[15,2,1,"","__init__"],[15,6,1,"","components"],[15,6,1,"","configdict"],[15,2,1,"","configure_components"],[15,2,1,"","consecutive_refinement_order"],[15,6,1,"","error_model"],[15,2,1,"","fix_initial_parameter"],[15,6,1,"","fixed_components"],[15,2,1,"","from_data"],[15,2,1,"","from_dict"],[15,2,1,"","get_shared_components"],[15,5,1,"","id_"],[15,6,1,"","is_scaled"],[15,2,1,"","limit_image_range"],[15,2,1,"","load_error_model"],[15,6,1,"","n_params"],[15,2,1,"","plot_model_components"],[15,2,1,"","record_intensity_combination_Imid"],[15,2,1,"","set_error_model"],[15,2,1,"","set_scaling_model_as_scaled"],[15,2,1,"","set_scaling_model_as_unscaled"],[15,2,1,"","set_valid_image_range"],[15,2,1,"","to_dict"],[15,2,1,"","update"]],"dials.algorithms.scaling.outlier_rejection":[[15,1,1,"","NormDevOutlierRejection"],[15,1,1,"","OutlierRejectionBase"],[15,1,1,"","SimpleNormDevOutlierRejection"],[15,1,1,"","TargetedOutlierRejection"],[15,3,1,"","determine_Esq_outlier_index_arrays"],[15,3,1,"","determine_outlier_index_arrays"],[15,3,1,"","reject_outliers"]],"dials.algorithms.scaling.outlier_rejection.NormDevOutlierRejection":[[15,2,1,"","__init__"]],"dials.algorithms.scaling.outlier_rejection.OutlierRejectionBase":[[15,2,1,"","__init__"],[15,5,1,"","final_outlier_arrays"],[15,2,1,"","run"]],"dials.algorithms.scaling.outlier_rejection.SimpleNormDevOutlierRejection":[[15,2,1,"","__init__"]],"dials.algorithms.scaling.outlier_rejection.TargetedOutlierRejection":[[15,2,1,"","__init__"]],"dials.algorithms.spot_finding":[[16,0,0,"-","factory"],[16,0,0,"-","finder"]],"dials.algorithms.spot_finding.factory":[[16,1,1,"","BackgroundGradientFilter"],[16,1,1,"","FilterRunner"],[16,1,1,"","PeakCentroidDistanceFilter"],[16,1,1,"","SpotDensityFilter"],[16,1,1,"","SpotFinderFactory"],[16,3,1,"","generate_phil_scope"]],"dials.algorithms.spot_finding.factory.BackgroundGradientFilter":[[16,2,1,"","__init__"],[16,2,1,"","run"]],"dials.algorithms.spot_finding.factory.FilterRunner":[[16,2,1,"","__init__"],[16,2,1,"","check_flags"]],"dials.algorithms.spot_finding.factory.PeakCentroidDistanceFilter":[[16,2,1,"","__init__"],[16,2,1,"","run"]],"dials.algorithms.spot_finding.factory.SpotDensityFilter":[[16,2,1,"","__init__"],[16,2,1,"","run"]],"dials.algorithms.spot_finding.factory.SpotFinderFactory":[[16,2,1,"","configure_filter"],[16,2,1,"","configure_threshold"],[16,2,1,"","from_parameters"],[16,2,1,"","load_image"]],"dials.algorithms.spot_finding.finder":[[16,1,1,"","ExtractPixelsFromImage"],[16,1,1,"","ExtractPixelsFromImage2DNoShoeboxes"],[16,1,1,"","ExtractSpots"],[16,1,1,"","ExtractSpotsParallelTask"],[16,1,1,"","SpotFinder"],[16,1,1,"","TOFSpotFinder"],[16,3,1,"","pixel_list_to_reflection_table"],[16,3,1,"","pixel_list_to_shoeboxes"],[16,3,1,"","shoeboxes_to_reflection_table"]],"dials.algorithms.spot_finding.finder.ExtractPixelsFromImage":[[16,2,1,"","__init__"]],"dials.algorithms.spot_finding.finder.ExtractPixelsFromImage2DNoShoeboxes":[[16,2,1,"","__init__"]],"dials.algorithms.spot_finding.finder.ExtractSpots":[[16,2,1,"","__init__"]],"dials.algorithms.spot_finding.finder.ExtractSpotsParallelTask":[[16,2,1,"","__init__"]],"dials.algorithms.spot_finding.finder.SpotFinder":[[16,2,1,"","__init__"],[16,2,1,"","find_spots"]],"dials.algorithms.spot_finding.finder.TOFSpotFinder":[[16,2,1,"","__init__"]],"dials.algorithms.spot_prediction":[[17,0,0,"-","reflection_predictor"]],"dials.algorithms.spot_prediction.reflection_predictor":[[17,1,1,"","ReflectionPredictor"]],"dials.algorithms.spot_prediction.reflection_predictor.ReflectionPredictor":[[17,2,1,"","__init__"],[17,2,1,"","predictor"]],"dials.algorithms.symmetry":[[18,0,0,"-","cosym"],[18,0,0,"-","laue_group"],[18,3,1,"","median_unit_cell"],[18,0,0,"-","reindex_to_reference"],[18,3,1,"","resolution_filter_from_array"],[18,3,1,"","resolution_filter_from_reflections_experiments"],[18,1,1,"","symmetry_base"]],"dials.algorithms.symmetry.cosym":[[18,1,1,"","CosymAnalysis"],[18,1,1,"","ScoreSubGroup"],[18,1,1,"","ScoreSymmetryElement"],[18,1,1,"","SymmetryAnalysis"],[18,3,1,"","change_of_basis_op_to_best_cell"],[18,0,0,"-","engine"],[18,3,1,"","extract_reference_intensities"],[18,0,0,"-","target"]],"dials.algorithms.symmetry.cosym.CosymAnalysis":[[18,2,1,"","__init__"],[18,2,1,"","as_dict"],[18,2,1,"","as_json"],[18,2,1,"","run"]],"dials.algorithms.symmetry.cosym.ScoreSubGroup":[[18,2,1,"","__init__"],[18,2,1,"","as_dict"],[18,6,1,"","stars"]],"dials.algorithms.symmetry.cosym.ScoreSymmetryElement":[[18,2,1,"","__init__"],[18,2,1,"","as_dict"],[18,6,1,"","stars"]],"dials.algorithms.symmetry.cosym.SymmetryAnalysis":[[18,2,1,"","__init__"],[18,2,1,"","as_dict"],[18,2,1,"","subgroups_table"],[18,2,1,"","summary_table"],[18,2,1,"","sym_ops_table"]],"dials.algorithms.symmetry.cosym.engine":[[18,1,1,"","lbfgs_with_curvs"],[18,3,1,"","minimize_scipy"],[18,3,1,"","minimize_scitbx_lbfgs"]],"dials.algorithms.symmetry.cosym.engine.lbfgs_with_curvs":[[18,2,1,"","__init__"],[18,2,1,"","callback_after_step"],[18,2,1,"","compute_functional_and_gradients"],[18,2,1,"","compute_functional_gradients_and_curvatures"],[18,2,1,"","compute_functional_gradients_diag"]],"dials.algorithms.symmetry.cosym.target":[[18,1,1,"","Target"]],"dials.algorithms.symmetry.cosym.target.Target":[[18,2,1,"","__init__"],[18,2,1,"","compute_functional"],[18,2,1,"","compute_functional_score_for_dimension_assessment"],[18,2,1,"","compute_gradients"],[18,2,1,"","compute_gradients_fd"],[18,2,1,"","curvatures"],[18,2,1,"","curvatures_fd"],[18,5,1,"","dim"],[18,2,1,"","set_dimensions"]],"dials.algorithms.symmetry.laue_group":[[18,1,1,"","CorrelationCoefficientAccumulator"],[18,1,1,"","LaueGroupAnalysis"],[18,1,1,"","ScoreCorrelationCoefficient"],[18,1,1,"","ScoreSubGroup"],[18,1,1,"","ScoreSymmetryElement"],[18,3,1,"","trunccauchy_pdf"]],"dials.algorithms.symmetry.laue_group.CorrelationCoefficientAccumulator":[[18,2,1,"","__init__"],[18,2,1,"","accumulate"],[18,2,1,"","coefficient"],[18,2,1,"","denominator"],[18,2,1,"","n"],[18,2,1,"","numerator"]],"dials.algorithms.symmetry.laue_group.LaueGroupAnalysis":[[18,2,1,"","__init__"],[18,2,1,"","as_dict"],[18,2,1,"","as_json"]],"dials.algorithms.symmetry.laue_group.ScoreCorrelationCoefficient":[[18,2,1,"","__init__"],[18,6,1,"","p_cc_given_not_s"],[18,6,1,"","p_cc_given_s"],[18,6,1,"","p_s_given_cc"]],"dials.algorithms.symmetry.laue_group.ScoreSubGroup":[[18,2,1,"","__init__"],[18,2,1,"","as_dict"]],"dials.algorithms.symmetry.laue_group.ScoreSymmetryElement":[[18,2,1,"","__init__"],[18,2,1,"","as_dict"]],"dials.algorithms.symmetry.reindex_to_reference":[[18,3,1,"","determine_reindex_operator_against_reference"]],"dials.algorithms.symmetry.symmetry_base":[[18,2,1,"","__init__"],[18,2,1,"","kernel_normalisation"],[18,2,1,"","ml_aniso_normalisation"],[18,2,1,"","ml_iso_normalisation"]],"dials.array_family":[[20,0,0,"-","flex"]],"dials.extensions":[[31,0,0,"-","dispersion_spotfinder_threshold_ext"],[31,0,0,"-","gaussian_rs_profile_model_ext"],[31,0,0,"-","null_background_ext"],[31,0,0,"-","simple_background_ext"],[31,0,0,"-","simple_centroid_ext"]],"dials.extensions.dispersion_spotfinder_threshold_ext":[[31,1,1,"","DispersionSpotFinderThresholdExt"],[31,3,1,"","estimate_global_threshold"]],"dials.extensions.dispersion_spotfinder_threshold_ext.DispersionSpotFinderThresholdExt":[[31,2,1,"","__init__"],[31,2,1,"","compute_threshold"],[31,5,1,"","name"],[31,2,1,"","phil"]],"dials.extensions.gaussian_rs_profile_model_ext":[[31,1,1,"","GaussianRSProfileModelExt"]],"dials.extensions.gaussian_rs_profile_model_ext.GaussianRSProfileModelExt":[[31,2,1,"","algorithm"],[31,5,1,"","default"],[31,2,1,"","from_dict"],[31,5,1,"","name"],[31,2,1,"","phil"]],"dials.extensions.null_background_ext":[[31,1,1,"","NullBackgroundExt"]],"dials.extensions.null_background_ext.NullBackgroundExt":[[31,2,1,"","__init__"],[31,2,1,"","compute_background"],[31,5,1,"","name"]],"dials.extensions.simple_background_ext":[[31,1,1,"","SimpleBackgroundExt"]],"dials.extensions.simple_background_ext.SimpleBackgroundExt":[[31,2,1,"","__init__"],[31,2,1,"","compute_background"],[31,5,1,"","name"],[31,2,1,"","phil"]],"dials.extensions.simple_centroid_ext":[[31,1,1,"","SimpleCentroidExt"]],"dials.extensions.simple_centroid_ext.SimpleCentroidExt":[[31,2,1,"","__init__"],[31,2,1,"","compute_centroid"],[31,5,1,"","default"],[31,5,1,"","name"]],"dials.util":[[33,0,0,"-","command_line"],[33,0,0,"-","export_mtz"],[33,0,0,"-","export_text"],[33,0,0,"-","image"],[33,0,0,"-","installer"],[33,0,0,"-","ioutil"],[33,0,0,"-","nexus"],[33,0,0,"-","options"]],"dials.util.command_line":[[33,1,1,"","Command"],[33,1,1,"","ProgressBar"],[33,1,1,"","ProgressBarTimer"],[33,3,1,"","coloured"],[33,3,1,"","heading"]],"dials.util.command_line.Command":[[33,2,1,"","end"],[33,5,1,"","indent"],[33,5,1,"","max_length"],[33,5,1,"","print_time"],[33,2,1,"","start"]],"dials.util.command_line.ProgressBar":[[33,2,1,"","__init__"],[33,2,1,"","finished"],[33,2,1,"","update"]],"dials.util.command_line.ProgressBarTimer":[[33,2,1,"","__init__"],[33,2,1,"","get_elapsed_time"],[33,2,1,"","update"]],"dials.util.export_mtz":[[33,1,1,"","MADMergedMTZWriter"],[33,1,1,"","MTZWriterBase"],[33,1,1,"","MergedMTZWriter"],[33,1,1,"","WavelengthGroup"],[33,3,1,"","add_batch_list"],[33,3,1,"","convert_to_cambridge"],[33,3,1,"","export_mtz"],[33,3,1,"","log_summary"],[33,3,1,"","match_wavelengths"],[33,3,1,"","rotate_crystal"],[33,3,1,"","write_columns"]],"dials.util.export_mtz.MADMergedMTZWriter":[[33,2,1,"","add_dataset"]],"dials.util.export_mtz.MTZWriterBase":[[33,2,1,"","__init__"],[33,2,1,"","add_crystal"],[33,2,1,"","add_empty_dataset"]],"dials.util.export_mtz.MergedMTZWriter":[[33,2,1,"","add_dataset"]],"dials.util.export_mtz.WavelengthGroup":[[33,2,1,"","__init__"],[33,2,1,"","add_experiment"],[33,2,1,"","calculate_weighted_mean"],[33,5,1,"","exp_nos"],[33,5,1,"","identifiers"],[33,5,1,"","max_possible_wl"],[33,5,1,"","min_wl"],[33,5,1,"","wavelengths"],[33,5,1,"","weighted_mean"]],"dials.util.export_text":[[33,3,1,"","export_text"]],"dials.util.image":[[33,1,1,"","reader"]],"dials.util.image.reader":[[33,2,1,"","get_data"],[33,2,1,"","read_file"]],"dials.util.installer":[[33,1,1,"","installer"]],"dials.util.installer.installer":[[33,5,1,"","base_package_options"],[33,5,1,"","configure_modules"],[33,5,1,"","dest_dir_prefix"],[33,5,1,"","include_gui_packages"],[33,5,1,"","installer_dir"],[33,5,1,"","make_apps"],[33,5,1,"","product_name"],[33,2,1,"","product_specific_finalize_install"],[33,5,1,"","remove_sources_default"],[33,5,1,"","source_packages"]],"dials.util.ioutil":[[33,3,1,"","get_inverse_ub_matrix_from_xparm"],[33,3,1,"","get_space_group_type_from_xparm"]],"dials.util.nexus":[[33,3,1,"","dump"],[33,3,1,"","get_entry"],[33,3,1,"","load"]],"dials.util.options":[[33,1,1,"","ArgumentHandlingErrorInfo"],[33,1,1,"","ArgumentParser"],[33,1,1,"","ArgumentParserBase"],[33,1,1,"","Importer"],[33,4,1,"","InvalidPhilError"],[33,1,1,"","OptionParser"],[33,1,1,"","PhilCommandParser"],[33,3,1,"","flatten_experiments"],[33,3,1,"","flatten_reflections"],[33,3,1,"","reflections_and_experiments_from_files"]],"dials.util.options.ArgumentHandlingErrorInfo":[[33,5,1,"","exception"],[33,5,1,"","message"],[33,5,1,"","name"],[33,5,1,"","traceback"],[33,5,1,"","type"],[33,5,1,"","validation"]],"dials.util.options.ArgumentParser":[[33,2,1,"","__init__"],[33,6,1,"","diff_phil"],[33,2,1,"","format_help"],[33,2,1,"","parse_args"],[33,6,1,"","phil"],[33,6,1,"","system_phil"]],"dials.util.options.ArgumentParserBase":[[33,2,1,"","__init__"],[33,2,1,"","format_epilog"],[33,2,1,"","parse_known_args"]],"dials.util.options.Importer":[[33,2,1,"","__init__"],[33,2,1,"","try_read_experiments"],[33,2,1,"","try_read_experiments_from_images"],[33,2,1,"","try_read_reflections"]],"dials.util.options.OptionParser":[[33,2,1,"","__init__"]],"dials.util.options.PhilCommandParser":[[33,2,1,"","__init__"],[33,6,1,"","diff_phil"],[33,2,1,"","parse_args"],[33,6,1,"","phil"],[33,6,1,"","system_phil"]],"dxtbx":[[26,0,0,"-","imageset"]],"dxtbx.imageset":[[26,1,1,"","ExternalLookup"],[26,1,1,"","ExternalLookupItemBool"],[26,1,1,"","ExternalLookupItemDouble"],[26,1,1,"","ImageGrid"],[26,1,1,"","ImageSequence"],[26,1,1,"","ImageSet"],[26,1,1,"","ImageSetData"],[26,1,1,"","ImageSetFactory"],[26,1,1,"","ImageSetLazy"],[26,1,1,"","MemReader"]],"dxtbx.imageset.ExternalLookup":[[26,2,1,"","__init__"],[26,6,1,"","dx"],[26,6,1,"","dy"],[26,6,1,"","gain"],[26,6,1,"","mask"],[26,6,1,"","pedestal"]],"dxtbx.imageset.ExternalLookupItemBool":[[26,2,1,"","__init__"],[26,6,1,"","data"],[26,6,1,"","filename"]],"dxtbx.imageset.ExternalLookupItemDouble":[[26,2,1,"","__init__"],[26,6,1,"","data"],[26,6,1,"","filename"]],"dxtbx.imageset.ImageGrid":[[26,2,1,"","__init__"],[26,2,1,"","from_imageset"],[26,2,1,"","get_grid_size"]],"dxtbx.imageset.ImageSequence":[[26,2,1,"","__init__"],[26,2,1,"","complete_set"],[26,2,1,"","get_array_range"],[26,2,1,"","get_beam"],[26,2,1,"","get_detector"],[26,2,1,"","get_goniometer"],[26,2,1,"","get_scan"],[26,2,1,"","get_template"],[26,2,1,"","partial_set"],[26,2,1,"","set_beam"],[26,2,1,"","set_detector"],[26,2,1,"","set_goniometer"],[26,2,1,"","set_scan"],[26,2,1,"","update_detector_px_mm_data"]],"dxtbx.imageset.ImageSet":[[26,2,1,"","__init__"],[26,2,1,"","as_imageset"],[26,2,1,"","clear_cache"],[26,2,1,"","complete_set"],[26,2,1,"","data"],[26,6,1,"","external_lookup"],[26,2,1,"","get_beam"],[26,2,1,"","get_corrected_data"],[26,2,1,"","get_detector"],[26,2,1,"","get_detectorbase"],[26,2,1,"","get_format_class"],[26,2,1,"","get_gain"],[26,2,1,"","get_goniometer"],[26,2,1,"","get_image_identifier"],[26,2,1,"","get_mask"],[26,2,1,"","get_path"],[26,2,1,"","get_pedestal"],[26,2,1,"","get_raw_data"],[26,2,1,"","get_scan"],[26,2,1,"","get_spectrum"],[26,2,1,"","get_vendortype"],[26,2,1,"","has_dynamic_mask"],[26,2,1,"","indices"],[26,2,1,"","is_marked_for_rejection"],[26,2,1,"","mark_for_rejection"],[26,2,1,"","masker"],[26,2,1,"","params"],[26,2,1,"","partial_set"],[26,2,1,"","paths"],[26,2,1,"","reader"],[26,2,1,"","set_beam"],[26,2,1,"","set_detector"],[26,2,1,"","set_goniometer"],[26,2,1,"","set_scan"],[26,2,1,"","size"],[26,2,1,"","update_detector_px_mm_data"]],"dxtbx.imageset.ImageSetData":[[26,2,1,"","__init__"],[26,6,1,"","external_lookup"],[26,2,1,"","get_beam"],[26,2,1,"","get_data"],[26,2,1,"","get_detector"],[26,2,1,"","get_format_class"],[26,2,1,"","get_goniometer"],[26,2,1,"","get_image_identifier"],[26,2,1,"","get_master_path"],[26,2,1,"","get_params"],[26,2,1,"","get_path"],[26,2,1,"","get_scan"],[26,2,1,"","get_template"],[26,2,1,"","get_vendor"],[26,2,1,"","has_single_file_reader"],[26,2,1,"","is_marked_for_rejection"],[26,2,1,"","mark_for_rejection"],[26,2,1,"","masker"],[26,2,1,"","partial_data"],[26,2,1,"","reader"],[26,2,1,"","set_beam"],[26,2,1,"","set_detector"],[26,2,1,"","set_format_class"],[26,2,1,"","set_goniometer"],[26,2,1,"","set_params"],[26,2,1,"","set_scan"],[26,2,1,"","set_template"],[26,2,1,"","set_vendor"]],"dxtbx.imageset.ImageSetFactory":[[26,2,1,"","from_template"],[26,2,1,"","imageset_from_anyset"],[26,2,1,"","make_imageset"],[26,2,1,"","make_sequence"],[26,2,1,"","new"]],"dxtbx.imageset.ImageSetLazy":[[26,2,1,"","get_beam"],[26,2,1,"","get_corrected_data"],[26,2,1,"","get_detector"],[26,2,1,"","get_gain"],[26,2,1,"","get_goniometer"],[26,2,1,"","get_mask"],[26,2,1,"","get_scan"]],"dxtbx.imageset.MemReader":[[26,2,1,"","__init__"],[26,2,1,"","copy"],[26,2,1,"","identifiers"],[26,2,1,"","is_single_file_reader"],[26,2,1,"","master_path"],[26,2,1,"","paths"],[26,2,1,"","read"]],"dxtbx.model":[[22,1,1,"","Crystal"],[23,1,1,"","Detector"],[24,1,1,"","ExperimentList"],[22,1,1,"","MosaicCrystalKabsch2010"],[22,1,1,"","MosaicCrystalSauter2014"],[21,0,0,"-","beam"],[22,0,0,"-","crystal"],[23,0,0,"-","detector"],[24,0,0,"-","experiment_list"],[25,0,0,"-","goniometer"],[28,0,0,"-","profile"],[29,0,0,"-","scan"]],"dxtbx.model.Crystal":[[22,2,1,"","__init__"],[22,2,1,"","as_str"],[22,2,1,"","from_dict"],[22,2,1,"","get_crystal_symmetry"],[22,2,1,"","show"],[22,2,1,"","to_dict"]],"dxtbx.model.Detector":[[23,2,1,"","__init__"],[23,2,1,"","add_group"],[23,2,1,"","add_panel"],[23,2,1,"","from_dict"],[23,2,1,"","get_max_inscribed_resolution"],[23,2,1,"","get_max_resolution"],[23,2,1,"","get_names"],[23,2,1,"","get_panel_intersection"],[23,2,1,"","get_ray_intersection"],[23,2,1,"","has_projection_2d"],[23,2,1,"","hierarchy"],[23,2,1,"","is_similar_to"],[23,2,1,"","iter_levelorder"],[23,2,1,"","iter_panels"],[23,2,1,"","iter_preorder"],[23,2,1,"","rotate_around_origin"],[23,2,1,"","to_dict"]],"dxtbx.model.ExperimentList":[[24,2,1,"","__init__"],[24,2,1,"","all_laue"],[24,2,1,"","all_rotations"],[24,2,1,"","all_same_type"],[24,2,1,"","all_sequences"],[24,2,1,"","all_stills"],[24,2,1,"","all_tof"],[24,2,1,"","append"],[24,2,1,"","as_file"],[24,2,1,"","as_json"],[24,2,1,"","beams"],[24,2,1,"","change_basis"],[24,2,1,"","clear"],[24,2,1,"","crystals"],[24,2,1,"","detectors"],[24,2,1,"","empty"],[24,2,1,"","extend"],[24,2,1,"","find"],[24,2,1,"","from_file"],[24,2,1,"","from_templates"],[24,2,1,"","goniometers"],[24,2,1,"","identifiers"],[24,2,1,"","imagesets"],[24,2,1,"","indices"],[24,2,1,"","is_consistent"],[24,2,1,"","nullify_all_single_file_reader_format_instances"],[24,2,1,"","profiles"],[24,2,1,"","remove_on_experiment_identifiers"],[24,2,1,"","replace"],[24,2,1,"","scaling_models"],[24,2,1,"","scans"],[24,2,1,"","select_on_experiment_identifiers"],[24,2,1,"","to_dict"],[24,2,1,"","where"]],"dxtbx.model.MosaicCrystalKabsch2010":[[22,2,1,"","__init__"],[22,2,1,"","as_str"],[22,2,1,"","from_dict"],[22,2,1,"","get_mosaicity"],[22,2,1,"","is_similar_to"],[22,2,1,"","set_mosaicity"],[22,2,1,"","to_dict"]],"dxtbx.model.MosaicCrystalSauter2014":[[22,2,1,"","__init__"],[22,2,1,"","as_str"],[22,2,1,"","from_dict"],[22,2,1,"","get_A_as_sqr"],[22,2,1,"","get_A_inverse_as_sqr"],[22,2,1,"","get_domain_size_ang"],[22,2,1,"","get_half_mosaicity_deg"],[22,2,1,"","is_similar_to"],[22,2,1,"","set_domain_size_ang"],[22,2,1,"","set_half_mosaicity_deg"],[22,2,1,"","to_dict"]],"dxtbx.model.beam":[[21,1,1,"","BeamFactory"]],"dxtbx.model.beam.BeamFactory":[[21,2,1,"","complex"],[21,2,1,"","from_dict"],[21,2,1,"","from_phil"],[21,2,1,"","imgCIF"],[21,2,1,"","imgCIF_H"],[21,2,1,"","make_beam"],[21,2,1,"","make_polarized_beam"],[21,2,1,"","make_polychromatic_beam"],[21,2,1,"","simple"],[21,2,1,"","simple_directional"]],"dxtbx.model.crystal":[[22,1,1,"","CrystalFactory"]],"dxtbx.model.crystal.CrystalFactory":[[22,2,1,"","from_dict"],[22,2,1,"","from_mosflm_matrix"]],"dxtbx.model.detector":[[23,1,1,"","DetectorFactory"],[23,3,1,"","merge_panel_scope_extracts_by_id"]],"dxtbx.model.detector.DetectorFactory":[[23,2,1,"","complex"],[23,2,1,"","from_dict"],[23,2,1,"","from_phil"],[23,2,1,"","generate_from_phil"],[23,2,1,"","imgCIF"],[23,2,1,"","imgCIF_H"],[23,2,1,"","make_detector"],[23,2,1,"","overwrite_from_phil"],[23,2,1,"","sensor"],[23,2,1,"","simple"],[23,2,1,"","two_theta"]],"dxtbx.model.experiment_list":[[24,1,1,"","BeamComparison"],[24,1,1,"","DetectorComparison"],[24,1,1,"","ExperimentListFactory"],[24,1,1,"","GoniometerComparison"]],"dxtbx.model.experiment_list.BeamComparison":[[24,2,1,"","__init__"]],"dxtbx.model.experiment_list.DetectorComparison":[[24,2,1,"","__init__"]],"dxtbx.model.experiment_list.ExperimentListFactory":[[24,2,1,"","from_args"],[24,2,1,"","from_dict"],[24,2,1,"","from_filenames"],[24,2,1,"","from_imageset_and_crystal"],[24,2,1,"","from_json"],[24,2,1,"","from_json_file"],[24,2,1,"","from_pickle_file"],[24,2,1,"","from_sequence_and_crystal"],[24,2,1,"","from_serialized_format"],[24,2,1,"","from_stills_and_crystal"],[24,2,1,"","from_templates"],[24,2,1,"","from_xds"]],"dxtbx.model.experiment_list.GoniometerComparison":[[24,2,1,"","__init__"]],"dxtbx.model.goniometer":[[25,1,1,"","Goniometer"],[25,1,1,"","GoniometerFactory"],[25,1,1,"","KappaGoniometer"],[25,1,1,"","MultiAxisGoniometer"]],"dxtbx.model.goniometer.Goniometer":[[25,2,1,"","__init__"],[25,2,1,"","from_dict"],[25,2,1,"","get_fixed_rotation"],[25,2,1,"","get_num_scan_points"],[25,2,1,"","get_rotation_axis"],[25,2,1,"","get_rotation_axis_datum"],[25,2,1,"","get_setting_rotation"],[25,2,1,"","get_setting_rotation_at_scan_point"],[25,2,1,"","get_setting_rotation_at_scan_points"],[25,2,1,"","is_similar_to"],[25,6,1,"","num_scan_points"],[25,2,1,"","reset_scan_points"],[25,2,1,"","rotate_around_origin"],[25,2,1,"","set_fixed_rotation"],[25,2,1,"","set_rotation_axis"],[25,2,1,"","set_rotation_axis_datum"],[25,2,1,"","set_setting_rotation"],[25,2,1,"","set_setting_rotation_at_scan_points"],[25,2,1,"","to_dict"]],"dxtbx.model.goniometer.GoniometerFactory":[[25,2,1,"","from_dict"],[25,2,1,"","from_phil"],[25,2,1,"","imgCIF"],[25,2,1,"","imgCIF_H"],[25,2,1,"","kappa"],[25,2,1,"","known_axis"],[25,2,1,"","make_goniometer"],[25,2,1,"","make_kappa_goniometer"],[25,2,1,"","make_multi_axis_goniometer"],[25,2,1,"","multi_axis"],[25,2,1,"","multi_axis_goniometer_from_phil"],[25,2,1,"","single_axis"],[25,2,1,"","single_axis_goniometer_from_phil"],[25,2,1,"","single_axis_reverse"]],"dxtbx.model.goniometer.KappaGoniometer":[[25,2,1,"","__init__"],[25,2,1,"","get_alpha_angle"],[25,2,1,"","get_direction"],[25,2,1,"","get_kappa_angle"],[25,2,1,"","get_kappa_axis"],[25,2,1,"","get_omega_angle"],[25,2,1,"","get_omega_axis"],[25,2,1,"","get_phi_angle"],[25,2,1,"","get_phi_axis"],[25,2,1,"","get_scan_axis"]],"dxtbx.model.goniometer.MultiAxisGoniometer":[[25,2,1,"","__init__"],[25,2,1,"","from_dict"],[25,2,1,"","get_angles"],[25,2,1,"","get_axes"],[25,2,1,"","get_names"],[25,2,1,"","get_scan_axis"],[25,2,1,"","set_angles"],[25,2,1,"","set_axes"],[25,2,1,"","to_dict"]],"dxtbx.model.profile":[[28,1,1,"","ProfileModelFactory"]],"dxtbx.model.profile.ProfileModelFactory":[[28,2,1,"","from_dict"]],"dxtbx.model.scan":[[29,1,1,"","ScanFactory"]],"dxtbx.model.scan.ScanFactory":[[29,2,1,"","add"],[29,2,1,"","from_dict"],[29,2,1,"","from_phil"],[29,2,1,"","imgCIF"],[29,2,1,"","imgCIF_H"],[29,2,1,"","make_scan"],[29,2,1,"","make_scan_from_properties"],[29,2,1,"","search"],[29,2,1,"","single_file"]],"dxtbx.serialize":[[30,0,0,"-","imageset"],[30,0,0,"-","load"],[30,0,0,"-","xds"]],"dxtbx.serialize.imageset":[[30,3,1,"","basic_imageset_from_dict"],[30,3,1,"","basic_imageset_to_dict"],[30,3,1,"","filename_or_none"],[30,3,1,"","filename_to_absolute"],[30,3,1,"","imagesequence_from_dict"],[30,3,1,"","imagesequence_to_dict"],[30,3,1,"","imageset_from_dict"],[30,3,1,"","imageset_to_dict"]],"dxtbx.serialize.load":[[30,3,1,"","crystal"],[30,3,1,"","experiment_list"],[30,3,1,"","imageset"]],"dxtbx.serialize.xds":[[30,3,1,"","to_crystal"],[30,3,1,"","to_imageset"],[30,1,1,"","to_xds"],[30,3,1,"","xds_detector_name"]],"dxtbx.serialize.xds.to_xds":[[30,2,1,"","XDS_INP"],[30,2,1,"","__init__"],[30,2,1,"","get_beam"],[30,2,1,"","get_detector"],[30,2,1,"","get_goniometer"],[30,2,1,"","get_scan"],[30,2,1,"","get_template"],[30,2,1,"","xparm_xds"]]},"objnames":{"0":["py","module","Python module"],"1":["py","class","Python class"],"2":["py","method","Python method"],"3":["py","function","Python function"],"4":["py","exception","Python exception"],"5":["py","attribute","Python attribute"],"6":["py","property","Python property"]},"objtypes":{"0":"py:module","1":"py:class","2":"py:method","3":"py:function","4":"py:exception","5":"py:attribute","6":"py:property"},"terms":{"":[2,4,6,14,18,35,43,49,51,53,54,59,60,63,70,72,73,74,76,78,81,82,83,85,86,87,95],"0":[1,2,3,4,6,11,12,14,15,16,17,18,21,22,23,25,26,29,33,34,35,37,38,39,40,41,43,44,45,46,47,48,50,51,52,53,54,56,57,58,59,60,62,63,64,66,67,68,69,70,72,73,74,75,77,78,79,81,82,83,84,85,86,87,92,96],"00":[40,42,50,73,74,76,77,78,79,81,82,84,85,86,96],"000":[40,75,76,79,81,82,84,85,87],"0000":[73,74,78,81,82,84,85,87],"00000":[82,85],"00001":74,"0001":[33,63,72,82],"0001204":81,"0001218":85,"0001275":85,"0001285":85,"0001419":81,"0001711":85,"0002":[74,82,84],"0002209":85,"000235994":82,"000276":81,"0002764":85,"0002842":82,"0003111":85,"000345":82,"000363":85,"0003692":85,"000381":85,"0003868":82,"000406":85,"0004102":85,"0004467":85,"0004506":85,"0004518":81,"0004634":85,"00047":76,"0004804":85,"0004832":81,"0004946":85,"0005383":85,"0005439":85,"0005444":85,"0005848":85,"0006":81,"00062":76,"0006477":85,"0006649":85,"0006705":81,"0006723":85,"0007":14,"00072":74,"0007254":85,"0007329":85,"0007391":81,"00075":53,"0007655":81,"0007683":85,"00078":76,"0007897":85,"0008":84,"0008108":85,"0008164":81,"000831222":85,"0008647":81,"0008662":82,"0009":[81,85],"0009226":85,"0009726389448611214":3,"001":[14,53,59,60,73,82],"0010":85,"001011":82,"001016":82,"001034":85,"00104":[73,85],"00105601":82,"001114":85,"0012":[76,85],"001238":82,"0013":[76,81,82,84],"001314":82,"001455":82,"001485":83,"001499":83,"0015":[76,82],"001552":82,"0016":83,"001655":82,"00168":81,"00171":82,"001727":82,"001733":81,"001821":81,"00193":85,"00198884":82,"002":[16,46,47,50,51,82],"00206":73,"0021":82,"002108":81,"0021159302715049923":3,"0021250002879257116":3,"002153":82,"002168":82,"002213":81,"002306":82,"0025":53,"002529":85,"002579":82,"0026":82,"002637":82,"0027":82,"0028":78,"002804":82,"002887":85,"0029":[40,85],"003":73,"0030":[84,85],"00306":82,"0032":74,"003241":82,"0035":[81,84,85],"00355415":82,"0035544":82,"00356":87,"0036":85,"003802":82,"0039":84,"003907":74,"004":[41,51,54,58,73,76,84],"0040":82,"00401706":[53,59,60],"0041":[81,82,85],"00417":73,"0044":74,"0045":82,"0047":[84,85],"0048":84,"005":[54,73,79,82],"0051":74,"0052":82,"0053":[74,82,85],"005551":82,"00556573":85,"00567866":85,"005739":81,"005742":81,"006":[82,85],"0060":84,"0065":81,"0067":81,"0069":40,"007":[73,82,87],"0070":84,"0071":81,"0072":74,"0075":81,"0076":82,"0077":82,"0078":82,"007852057721998333":3,"008":[82,87],"008012":75,"0082":74,"0089":82,"0090":82,"0091":[78,82,84],"009233084500921031":3,"0093":84,"0094":84,"00945356":85,"0097":85,"0098":85,"009998":81,"00h":79,"01":[22,35,40,54,64,73,74,75,76,77,79,81,82,84,85,95,96],"010":87,"0101":74,"0102340":82,"01025":81,"01035":81,"0107":84,"0108":82,"0109":[81,82],"01092":81,"011":73,"01104":81,"0111":84,"01122":85,"0114":85,"0115":84,"0117":[74,82,84],"0118":84,"011929":85,"012":[79,84,85,87],"013":[82,84,85,86],"0131":84,"0134":85,"01357":85,"0137":74,"0139":85,"014":82,"0140":85,"0144":85,"0145":85,"015":[74,79,85,86],"0150":84,"0151":85,"0152":81,"015245":81,"015246":81,"015251":81,"015256":81,"015267":81,"015269":81,"015287":81,"0153":82,"01535":81,"015395":81,"0154":82,"0155":[82,85],"0156":[81,82],"015875":81,"016":82,"0163":85,"016585":84,"016592":84,"016653":84,"016897":84,"017":73,"0171":84,"0172":84,"0173":81,"017411":84,"0174515":40,"018":[76,82],"0180":85,"0181":[82,84],"018138":75,"018187":84,"0182":[82,84],"0185":84,"0187":82,"0188":[82,85],"0189":85,"019":[76,82,85,86],"0190":85,"0192":85,"019202":81,"0193":82,"0194":[74,82],"0195":82,"019552":81,"019553":81,"019579":81,"01966":81,"0198":85,"019867":81,"02":[1,14,40,41,51,53,54,58,59,60,74,76,79,81,82,84,85,95,96],"020":[73,76,79,85],"02000":[82,85],"0202":85,"0203":85,"0208905":40,"0209":74,"021":[76,78,84],"02159":81,"021919":81,"021931":81,"022":81,"02202":81,"02204":81,"022041":81,"0221":84,"02218":87,"0222":87,"0224":82,"0225":82,"02263":81,"0227":85,"022913":81,"02297":83,"023":[73,76,87],"0231":82,"02339":81,"0237":78,"024":87,"0243959":40,"0244":74,"0246":85,"0247":85,"0248":85,"0249":85,"025":[76,82,85,87],"0250":78,"02501":73,"0251":74,"0252":82,"02585":83,"02594":83,"026":[76,85,86],"027":[78,82,85],"0275":83,"02791":81,"027998":81,"028":[73,76,78,82,84,85],"0280":87,"028146":81,"02846":81,"0289":83,"029":[11,53,79,82,87],"0290806":40,"0293":[83,87],"02939":85,"02984":85,"02988":81,"02996":85,"02997":81,"02d":[76,83],"03":[38,40,73,76,79,81,82,84,85,95,96],"030":[82,84,86,87],"03001":85,"03012":85,"03019":85,"0303":85,"03034":85,"03063":85,"03096":85,"031":[78,82,84,85],"03118":85,"03122":85,"03123":85,"03127":85,"03148":85,"03157":85,"03158":85,"03182":85,"032":[73,79,85,87],"0320":81,"03208":85,"03209":85,"0321":74,"0322":85,"03243":85,"0326":85,"03272":85,"03288":85,"03295":85,"03297":85,"033":[73,76,78,86],"03302":85,"03338":85,"0337238":40,"03376":81,"03379":85,"03384":85,"034":[73,79,82],"03406":85,"03425":85,"0344":75,"03444":85,"03449":85,"034575":81,"03468":81,"0347":85,"03472":85,"03481":81,"03485":85,"03497":85,"035":[79,84,85,86],"03501":85,"03511":85,"03518":81,"03544":85,"0356":81,"03563":85,"03577":81,"03583":85,"03588":81,"036":[82,84,85],"03613":82,"0364":82,"03646":85,"03656":81,"03664":82,"03669":82,"03682":81,"03689":82,"037":[82,84,85,86],"03707":85,"03715":82,"0373":82,"0374":85,"03742":85,"03754":82,"037648":40,"0377":85,"038":[76,84,96],"038826":81,"03886":85,"039":[76,84],"0392":85,"039452":85,"039453":85,"039457":85,"039466":82,"039467":85,"03953":82,"039673":85,"03982":82,"03984":82,"03988":82,"04":[40,44,73,74,76,78,79,81,82,84,85,87,95,96],"040":[78,85,86],"04029":83,"040455":81,"040474":85,"040475":85,"04048":85,"04049":82,"040503":85,"040618":85,"040637":85,"040762":81,"041":[73,76,81,82,85],"04112":81,"041162":85,"04119":82,"04124":82,"04128":81,"04132":82,"04138":81,"041514":81,"04171":82,"04174":81,"04178":81,"0418":85,"04183":82,"04184":85,"04197":82,"042":[76,82,84],"04222":81,"042236":84,"0424":81,"042413":84,"042452":84,"04251":81,"042591":84,"04261":81,"042631":84,"042632":84,"042657":81,"0427":84,"04272":82,"04286":82,"0429":84,"04297":82,"043":[78,79,82,85],"043159":85,"043495":81,"044":73,"044179":85,"04424":82,"04425":82,"04434":82,"04435":82,"04466":[81,82],"044662":81,"044668":81,"04468":81,"044695":81,"044708":81,"044746":81,"04477":82,"04478":82,"044868":81,"04495":82,"045":[73,76,84,85],"045054":81,"04519":82,"045205":81,"045228":81,"04524":[81,82],"04528":82,"0453":84,"04537":82,"04538":81,"04539":[82,85],"0455":85,"045568":81,"0457":85,"0459":85,"045937":81,"046":[73,76,84],"04602":85,"04604":82,"046104":84,"046278":[85,86],"046286":[85,86],"046291":[85,86],"046292":[85,86],"04634":81,"046349":[85,86],"04642":82,"04673":82,"04679":82,"0468":83,"046957":85,"04698":85,"046981":85,"046993":85,"046997":85,"047":[73,74,76,82],"047719":81,"047721":81,"047726":81,"047736":81,"047738":81,"047759":81,"047825":85,"047833":81,"047864":[85,86],"047865":[85,86],"047872":[85,86],"047892":[85,86],"047934":[85,86],"04794":82,"048":76,"048059":[85,86],"0481":75,"048167":81,"04847":85,"048472":85,"048479":85,"048491":85,"0485":85,"048503":85,"048515":85,"04852":85,"048528":85,"048535":85,"048536":85,"048537":85,"04854":85,"04859":85,"048681":85,"048684":85,"048696":85,"048722":85,"048834":85,"049":[84,85,86],"049034":81,"04908":82,"049099":82,"04913":82,"049152":85,"049153":85,"049155":85,"049156":85,"049169":82,"049172":85,"0492":85,"049278":82,"049393":82,"049473":85,"049474":85,"049483":85,"049494":85,"049495":85,"049498":85,"049499":85,"049518":85,"049547":82,"0496":83,"0497":84,"04974":82,"049808":81,"05":[11,14,21,40,41,51,53,54,58,69,72,74,75,76,81,82,83,84,85,87,96],"050":[73,76,82,85,86],"050076":81,"050116":82,"05016":82,"05018":82,"05068":82,"050729":81,"05081":82,"05087":82,"050901":[85,86],"050906":[85,86],"05098":82,"051":[73,75,76,82,84],"051014":81,"05102":82,"051066":[85,86],"0511":82,"05114":82,"051142":81,"05138":82,"051408":81,"051485":82,"052":[73,76,84,85],"052336":[85,86],"052372":[85,86],"052378":[85,86],"052619":81,"052654":81,"05266":82,"05293":82,"053":[73,82,84,86],"053448":82,"05362":82,"05369":82,"054":[73,76,85],"05440":82,"05443":82,"05445":82,"0546":87,"054701":95,"055":[74,76,84,85],"05538":81,"055389":82,"055785":[85,86],"056":[76,84,85],"0561":87,"05629":82,"056976":81,"057":78,"057045":82,"05733":82,"057777":85,"057786":81,"057829":81,"05791":81,"05792":82,"057928":82,"057932":82,"057935":82,"057936":82,"057937":82,"057954":82,"058":[3,73,82],"058023":81,"058044":82,"058114":81,"058127":81,"058167":81,"058198":81,"058208":81,"05821":81,"05822":82,"0582901":40,"058387":82,"059":[73,82,84,85,86],"059236":82,"059567":[85,86],"0598562":85,"05ch11231":[0,89],"06":[18,23,24,25,40,48,53,63,73,74,76,81,82,83,84,85,95],"060":[76,79],"06016":85,"06024":85,"06025":85,"06032":85,"060489":81,"060702":82,"061":[76,84],"061756":81,"062":[73,79,82,85],"06229":81,"0626":[83,85],"06279":82,"06294":85,"063":[76,81,82,84,85,86,87],"063075":81,"063395":81,"063401":81,"063419":81,"063456":81,"06351":81,"063529":81,"063617":81,"063629":81,"063644":81,"063645":81,"063654":81,"063682":81,"063706":81,"063734":81,"06379":81,"0638":85,"063825":81,"063827":81,"0639":85,"063949":81,"064":[76,84],"064045":81,"064091":81,"06414":81,"06416":81,"06454":81,"06467":81,"06499":84,"065":85,"065253":84,"065257":84,"065282":84,"065412":84,"065727":84,"06574":81,"06585":82,"066":[84,85],"066176":84,"066238":81,"06625":82,"06627":81,"066445":82,"06694":85,"067":[73,76,82,85,87],"067273":81,"0673":83,"067369":81,"067371":81,"067439":81,"067531":81,"067587":81,"067607":81,"067617":81,"06762":81,"068":[73,82,84,85,86],"0684":78,"068866":81,"069":[76,84],"069179":82,"0692":82,"069204":82,"069224":82,"069276":82,"06931":81,"069337":82,"069348":82,"069361":82,"069491":81,"069819":82,"06m":79,"07":[40,48,74,75,76,77,81,82,83,85,95],"070":[79,85],"071":[73,76,77,84,85],"07167":81,"072":[73,76,84],"0723":85,"073":[73,76,85],"073655":81,"074":[73,76,84],"074814":81,"075":[73,76,79,84],"075038":81,"075342":82,"0754":81,"075581":82,"075584":82,"075602":82,"075647":82,"075711":82,"075782":82,"0758":85,"0759":85,"076":[73,75,76,82,84,87],"0761":85,"076245":82,"076246":82,"076252":82,"076266":82,"076268":82,"076281":82,"076296":82,"076313":82,"076338":82,"076361":82,"076424":82,"076534":81,"0766":82,"076606":82,"076641":82,"076743":82,"0768":83,"0769":87,"076915":82,"077":[73,76,79,84,96],"0772":[82,85],"0774":83,"0775510135829585":76,"077690418635804":3,"0777":87,"078":[73,76,78,79,84,85],"0783":85,"078347":82,"078348":82,"078361":82,"078446":82,"07875":82,"0787666":40,"079":[73,76,84],"079354":82,"07961":85,"079758":84,"07ghz":[81,83],"08":[73,76,81,82,84,85],"080":[73,74,76,84],"08015":82,"080441":81,"08048":85,"08055":85,"08067":85,"080697":81,"08071":85,"080738":82,"08096":85,"081":[76,82,84,85],"081075":82,"081138":82,"08118":85,"0812":85,"081227":82,"08125":82,"081288":82,"081303":82,"081305":82,"081315":82,"081329":82,"08134":82,"081346":82,"08135":85,"081356":82,"081358":82,"081373":82,"0814":85,"081403":82,"081412":82,"081442":82,"081466":82,"081471":82,"08148":85,"081515":82,"081591":82,"081722":81,"081958":81,"082":[73,74,76,84],"082035":82,"082036":82,"08205":85,"08213":85,"082152":82,"08228":82,"082315":82,"082318":82,"08254":85,"08264":85,"082715":81,"08282":85,"082836":81,"08292":85,"08299":85,"083":76,"08308":82,"0832":87,"083417":82,"08348":85,"083513":81,"083698":74,"0838":84,"0839":84,"08396":85,"084":[76,82,85],"0842":85,"08422":85,"08438":85,"084417":81,"08443":85,"0847":83,"084967":81,"084969":81,"08498":81,"085":[73,76,84,85],"085025":81,"085115":81,"085215":81,"085247":81,"085285":81,"085337":81,"085391":81,"085475":81,"085597":81,"0856":83,"085719":81,"085801":81,"085882":81,"085887":81,"085909":81,"085958":81,"086":[76,85],"086026":81,"086068":81,"08608":81,"086115":81,"086122":81,"086136":81,"086155":81,"086176":81,"086181":81,"086195":81,"086197":81,"08649":85,"08685":85,"086918":81,"087":[76,85],"088":[76,82,84,85],"088252":81,"089":[73,76,84],"09":[73,74,76,78,79,81,82,84,85,95],"090":[73,76,82,84,85],"090391":81,"091":[73,78,84,86],"0913":87,"091952":81,"092":76,"092076":81,"092555":81,"093":[82,84],"093342":81,"0934":83,"093519":81,"094":[76,82],"094318":81,"094714":81,"095":[76,84,85,87],"09509":81,"095596":82,"095601":82,"095677":82,"096":[73,85],"096297":82,"096504":82,"096506":82,"096656":82,"096919":81,"097":[76,84],"097393":81,"097735":81,"097838":82,"098":85,"098106":82,"098364":81,"0985":82,"09856":82,"098888":81,"098988":81,"099":[73,85,87],"09913":82,"099929":81,"1":[0,1,2,3,4,6,11,14,16,17,18,21,22,29,33,34,35,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,57,58,59,60,62,63,64,66,68,69,70,72,73,74,76,77,79,80,81,82,83,84,85,86,87,93,95,96,99],"10":[1,11,14,15,18,40,41,42,43,47,51,53,54,55,56,58,59,60,63,64,72,73,74,75,78,79,81,82,83,84,85,87,95,96],"100":[1,18,40,41,45,47,50,51,53,54,55,58,59,60,63,72,73,76,79,81,82,84,85,86,87],"1000":[38,47,53,54,59,60,73,82,83,84,85],"10000":[64,78],"1000000":[14,23,53,59,60],"10000000":14,"10007":82,"10009":81,"1001":82,"1003":[73,82],"1005":82,"1006":82,"10087":81,"1009":[73,82],"100um":63,"101":[73,77,82,85],"1010":82,"1011":[81,82],"101111":85,"101265":85,"1013":[73,82],"1014":82,"101460":85,"10162":81,"10167":81,"1017":[73,82],"10172":84,"10179":81,"101813":85,"102":[73,82,84,85],"1020":82,"102009":85,"10213":85,"10215":85,"10219":81,"1022":[73,82],"10221":81,"10225":85,"1024":73,"10244":81,"10246":85,"10249":82,"1025":82,"1026":[73,82],"1028":[82,85],"103":[40,73,82,84,85],"1030":82,"1031":[73,82,85],"1032":82,"10324":81,"1033":[82,83],"1034":[73,82],"10341":85,"1036":[11,73,82],"10363":81,"1037":82,"1038":79,"10398":81,"104":[73,74,75,82,84,85,86],"1040":[11,76],"10408":81,"1041":[82,84],"1042":[82,83],"1043":82,"10448":84,"1045":82,"10457":[85,86],"1046":83,"10461":[85,86],"10467":[85,86],"10469":85,"1047":[81,82,83,85,86],"1048":83,"10485670":[53,59,60],"1049":[82,83],"105":[73,82,84,85],"10505":[85,86],"10514":[85,86],"1052":[83,85],"10522":85,"10525":85,"10531":85,"105342":85,"1054":76,"1056":82,"1057":82,"105712":85,"105724":85,"1058":82,"1059":73,"106":[74,81,82,85],"1060":[82,83],"10606":82,"1061":[76,82],"10613":82,"10615":82,"1062":40,"10626":82,"1063":[76,82],"10631":82,"10632":82,"10638":85,"10639":85,"1064":[82,85],"10641":85,"10648":[85,86],"1065":[76,82],"1066":82,"1067":[82,85],"106715":85,"10673":85,"10676":85,"10677":85,"10678":82,"1068":[82,87],"10686":85,"10688":85,"106889":85,"106891":85,"1069":82,"10693":85,"107":[73,74,82,85],"1070":[82,83],"107089":85,"10709":82,"107097":85,"1071":82,"1072":[73,82],"107264":[85,86],"107277":85,"10732":82,"1074":82,"10746":81,"1075":82,"10754":84,"1076":[82,85],"1079":82,"107999":85,"108":[82,84,85,87],"1080":[53,59,60],"1081":[73,81],"1082":82,"108207":85,"1083":[82,83],"10848":82,"1086":[82,83],"10869":83,"1087":82,"10877":83,"10878":81,"10879":83,"10888":[85,86],"10889":83,"1089":82,"109":[73,81,82,84,85,95],"1090":82,"109070":85,"1092":82,"1093":[81,82],"1094":[82,83,85],"10958":82,"1096":81,"10965":81,"1097":[82,83],"1099":[82,85],"11":[40,73,74,76,78,81,82,83,84,85,86,87,95],"110":[73,82,85],"1100":[81,82],"1101":73,"1103":82,"11037":81,"1104":[76,81,82,84],"1105":83,"1107":[11,47,53,59,60,75],"11078":81,"1108":82,"1109":82,"11090":85,"111":[73,74,76,81,82,85,95],"1111":82,"11116":81,"1112":[73,82],"1112402970091422":76,"11128":81,"1114":73,"11146":81,"1115":73,"112":[81,82,84,85],"11202":84,"1121":[73,82,85],"1123":82,"1125":[81,82],"11259":85,"1126":82,"112677":85,"1127":40,"1128":[81,82],"11284":82,"113":[74,76,81,82,85,95],"1130":[82,83,85],"1131":81,"1132":82,"1133":84,"11336":81,"11345":81,"1135":85,"113599":85,"113621":85,"113637":85,"11368":81,"113784":85,"113803":85,"113865":85,"113880":85,"1139":82,"113906":85,"11391":81,"113913":85,"113958":85,"113990":85,"114":[73,82,84,85,95],"1140":82,"114013":85,"114017":85,"114024":85,"114060":85,"114065":85,"1141":82,"114109":85,"114110":85,"114113":85,"114123":85,"114124":85,"114137":85,"114140":85,"114144":85,"114150":85,"114151":85,"114154":85,"114178":85,"114191":85,"114199":85,"1142":[82,83],"114207":85,"114214":85,"114230":85,"114242":85,"114243":85,"114265":85,"114266":85,"114275":85,"114277":85,"114292":85,"114325":85,"11437":82,"1144":82,"114431":85,"114470":85,"114482":85,"1145":82,"114507":85,"114518":85,"114543":85,"114555":85,"11479":85,"1148":[81,82],"114816":85,"1149":76,"115":[74,82,85,87],"1151":82,"1152":83,"1154":82,"1155":85,"11564":81,"1157":82,"116":[73,78,82,85],"11626":83,"1163":82,"1165":82,"1166":82,"1167":85,"1168":85,"117":[74,82,84,85],"1170":82,"1171":85,"11716":81,"1172":83,"1174":[81,82],"1175":[81,82],"1176":81,"1177":85,"11775":81,"1178":[81,82],"11794":86,"118":[74,78,82,85],"1180":82,"1181":85,"11826":81,"1183":85,"11836":81,"1184":82,"1185":82,"11851":81,"11855":85,"1186":[82,85],"1187":85,"1189":[81,82,85],"119":[78,81,82,85,96],"1190":[83,84],"11907":81,"1191":[82,85],"11915":81,"1193":82,"1194":82,"11940":82,"1195":82,"1197":[82,85],"11972":81,"11975":81,"1198":85,"12":[11,40,73,74,76,78,81,82,83,84,85,87],"120":[0,1,45,46,47,50,51,78,82,85,86,96],"1200":[82,83],"1201":85,"120152":79,"1202":82,"12029":81,"1203":[76,82],"1204":[82,85],"1205":[83,85],"1207":82,"1208":[82,85],"1209":85,"121":[11,73,76,77,78,82,85],"1210":[81,83,85],"1211":[82,83],"1212":[76,82],"12121":81,"1213":82,"1214":[82,85],"12145":81,"1215":82,"1216":82,"12164":81,"12167":81,"1217":[84,85],"121788":82,"1219":[82,85],"12198":87,"122":[73,76,78,82,85],"1220":[76,85],"1221":[76,85],"1222":[81,82,85],"1223":[82,85],"12234":81,"12249":82,"1225":82,"1226":[82,85],"12279":82,"12281":82,"1229":85,"12291":81,"123":[40,73,78,82,85],"1230":[82,87],"1231":[82,85],"1232":[81,83],"1233":[82,85],"1234":[49,85],"1235":85,"1237":82,"1238":[82,85],"1239":82,"124":[73,74,76,78,82,84,85],"1240":[82,85],"1241":82,"1242":[82,85],"1243":81,"12431":81,"1245":85,"1246":82,"1248":85,"1249":82,"12494":81,"124946":85,"12495":81,"125":[0,73,76,78,81,82,84,85],"1252":[82,85],"12528":81,"1253":[82,85],"1254":82,"12543":81,"1255":[82,85],"1256":85,"1257":[82,85],"1258":[82,85],"12582":81,"1259":[82,85],"12590":85,"126":[0,2,73,78,82,85],"1260":82,"1261":[83,85],"12612":81,"1262":85,"1263":[82,85],"12632":82,"1264":[82,85],"12647":81,"1265":[82,85],"1266":82,"1267":[82,85],"1268":[82,85],"1269":[82,85],"12695":84,"127":[73,76,78,81,82,85],"1270":[82,85],"1271":85,"1272":[40,82,85],"1273":85,"12735":81,"1274":95,"1275":[82,85,87],"1276":[82,85],"12769":95,"1277":85,"12774":81,"1278":[76,85],"128":[73,76,78,81,82,85],"1280":82,"1281":[82,85],"12815":81,"1282":85,"12825":85,"1284":[40,85],"12845":81,"1285":[82,85],"1286":[81,82,85],"128604":85,"1287":[82,85],"1288":[82,85,87],"1289":85,"129":[73,76,78,82,85],"1290":85,"12906":85,"1291":85,"1292":85,"1293":[84,85],"12934":81,"1294":85,"12942":81,"1295":[82,85],"1296":[82,85],"1297":[82,83,85],"12972":85,"1298":[82,85],"12984":82,"129863":82,"1299":[81,82,85],"12th":99,"13":[40,73,74,76,77,81,82,83,84,85,95,96],"130":[76,78,82,85],"1300":85,"13001":81,"1301":82,"13039":82,"1304":85,"1306":[82,85],"1307":[82,85],"130748":82,"130749":82,"1308":[82,83],"130878":82,"1309":[82,85],"130920":82,"130947":82,"130961":82,"130988":82,"131":[76,78,81,82,85],"1310":85,"131032":82,"131069":82,"131072":82,"131075":82,"1311":[82,85],"131102":82,"131107":82,"131138":82,"131143":82,"131181":82,"1312":85,"131244":82,"131286":82,"1313":82,"131302":82,"131333":82,"131360":82,"131363":82,"131398":82,"131446":82,"13145":76,"131474":82,"131478":82,"1315":85,"131503":82,"131505":82,"131546":82,"131547":82,"131553":82,"131574":82,"1316":82,"131615":82,"131653":82,"131689":82,"131699":82,"1317":85,"131706":82,"131708":82,"131729":82,"131757":82,"131784":82,"1318":[82,85],"131818":82,"131849":82,"1319":85,"131909":82,"131936":82,"131949":82,"13198":[85,86],"132":[0,76,78,81,82,84,85],"1320":85,"132001":82,"132052":82,"1321":85,"1322":[82,85],"1323":85,"1324":85,"1325":[82,85],"13252":83,"13254":83,"13258":83,"1326":[83,85],"13265":83,"1327":85,"1328":[82,85],"13280":82,"13282":[83,87],"1329":82,"13291":82,"133":[81,82,85],"1331":[82,83,85],"1332":85,"1333":[82,85],"1334":[82,83],"13347":82,"1335":[82,85],"13357":95,"1336":[82,83],"13362":95,"1337":85,"13375":81,"1338":85,"1339":85,"134":[76,78,81,82,84,85],"1340":[82,85],"1341":[82,85],"13413":[85,86],"1342":82,"1343":[82,85],"134383":74,"1344":85,"1345":[82,85],"13459":81,"1346":85,"1347":[82,85],"13476":[85,86],"1348":[82,85],"1349":[82,85],"135":[76,81,82,85],"1350":85,"1351":[82,85],"1352":[82,85],"1353":[82,85],"13534":83,"1354":85,"1355":85,"13559":81,"1356":85,"1357":85,"1358":[83,85],"1359":82,"136":[0,2,73,78,82,84,85,95,96],"1360":82,"1360324992":3,"1360324993":3,"1360324994":3,"1361":[73,81,82],"1362":85,"1363":[81,82,85],"1364":[83,85],"1365":82,"1366":85,"1367":85,"1368":85,"1369":85,"137":[73,74,82,84,85,87],"1371":[82,85],"1372":82,"13728":81,"1373":[73,85],"13737":81,"1374":85,"1375":85,"1376":85,"1377":83,"1379":[82,85],"138":[82,84,85],"1380":85,"1381":[83,85],"13818":85,"1382":85,"1383":[82,85],"13833":84,"1384":[82,85],"1385":[82,85],"1386":82,"1388":85,"13887":81,"1389":[82,85],"139":[76,82,84,85],"1390":[82,85],"1391":[82,85],"1392":82,"1393":85,"1394":85,"1396":81,"1397":[81,82,85],"1398":85,"1399":[82,83,85],"13_integr":79,"13th":99,"14":[3,40,73,74,76,81,82,83,85,95],"140":[73,76,81,82,85],"1400":[82,95],"1401":82,"1403":85,"1404":[40,82,85],"1405":85,"1406":[82,85],"1407":[82,85],"14071":76,"1408":85,"1409":85,"141":[76,82,84,85],"1410":85,"14108":81,"1411":[82,85],"1412":82,"14122e":82,"1413":[83,85],"1414":[82,85],"1415":85,"1416":85,"14168":81,"1417":85,"1418":[82,85],"1419":[82,85],"142":[73,76,82,85],"1420":85,"1421":[82,85],"1422":[82,83],"1423":[82,85],"1424":[82,85],"1425":85,"1426":85,"1427":85,"1428":[73,82],"1429":[82,83,85],"143":[82,85],"1430":[82,83,85],"14306":81,"1431":85,"1432":85,"1433":85,"14334":85,"14339":81,"1434":[82,85],"1435":85,"1436":[82,85],"1437":85,"14379":81,"1438":[83,85],"1439":85,"144":[74,76,82,85],"1440":[82,85],"1441":85,"1442":85,"1444":85,"1445":85,"1446":82,"1447":[82,85],"14476":81,"1448":85,"1449":82,"145":[0,73,76,81,82,85],"14513":82,"1452":[82,85],"1453":85,"1454":[82,83,85],"1455":85,"1456":85,"1457":85,"1458":[82,85],"1459":[82,85,95],"146":[73,81,82,85],"1460":85,"1461":85,"14610":82,"14618":82,"1462":[82,83,85],"1463":85,"1464":[82,83,85],"1465":[85,95],"14653":81,"1466":[82,85],"1467":[83,85],"14673":81,"14689":81,"1469":[82,85],"147":[73,82,85],"1470":85,"1471":[83,85],"1472":[83,85],"1473":[82,83,85],"1474":[81,85],"1475":[82,85],"14752":84,"1476":[82,85],"14766":85,"1477":[82,83,85],"1478":[81,85],"14785":81,"1479":82,"148":[73,76,81,82,85],"1480":85,"14803":85,"1481":83,"1482":85,"1484":85,"14842":81,"1485":85,"1486":82,"1487":82,"148799":40,"1488":[82,85],"1489":85,"149":[73,76,79,82,85],"1490":[78,85],"1491":85,"14918":82,"1492":85,"1493":[82,85],"1495":82,"1496":82,"1497":85,"1498":[78,85],"1499":85,"15":[14,40,53,54,63,64,73,76,81,82,83,84,85,95],"150":[47,53,54,63,69,72,73,79,81,82,84,85,86,95],"1500":[82,85],"15001":81,"15006":81,"1501":85,"1502":85,"1503":[82,85],"15033":81,"15038":81,"1504":[85,95],"1505":[82,85],"1506":[84,85],"15064":86,"15067":82,"1507":[81,82,85],"15078":82,"1508":[78,83,85],"1509":85,"151":[73,76,81,82,84,85],"1510":[85,95],"1511":[81,85],"1512":[81,82,85],"151264":85,"1513":85,"1514":[82,95],"15140":76,"15144":82,"1515":85,"15151":81,"15165":84,"1517":95,"1518":85,"1519":85,"151998":85,"152":[78,81,82,85],"1520":85,"1521":85,"1522":82,"1523":[82,85],"1525":[18,82],"1526":85,"15264":82,"1528":85,"15286":82,"1529":[83,85],"15295":81,"153":[76,78,81,82,85],"1530":85,"1531":[82,85],"1532":85,"15320":76,"15323":81,"1533":[82,85],"1534":85,"1535":[78,82,85],"1536":[82,85],"15365":81,"1537":85,"15375":85,"15376":83,"1538":[84,85],"1539":84,"15397":82,"154":[74,76,78,81,82,84,85],"1540":85,"15417":81,"1542":85,"15427":81,"1544":82,"1545":85,"1546":85,"15463":81,"1547":81,"1549":85,"155":[73,76,81,82,85],"1550":[81,85],"1551":[82,83,85],"1552":85,"1553":85,"1555":[82,85],"15552":82,"15575":[85,86],"1558":85,"15582":84,"15589":81,"1559":85,"155e":82,"156":[76,82,85],"1560":[78,85],"1561":82,"1562":[78,82,85],"156248":85,"1563":[82,83,85],"1564":85,"1565":85,"15652":82,"1568":85,"1569":[83,85],"157":[3,76,82,85],"1570":[83,85],"15715":82,"1572":85,"1573":[78,85],"1574":85,"1575":85,"1576":[82,85],"1576060":78,"1577":85,"15775":82,"15776":81,"1578":82,"1579":85,"15798":73,"158":[73,76,81,82,85],"1580":85,"1581":[83,85],"15813":82,"1582":85,"1583":[85,87],"15836":82,"1584":[78,85],"158400":76,"15845":82,"1585":85,"1586":[82,85],"1587":[83,85],"1588":[83,85],"1589":[81,85],"159":[78,82,83,85],"1590":82,"1591":85,"1592":82,"1593":85,"1594":85,"1596":85,"1597":85,"15973":73,"1598":[82,85],"1599":85,"16":[3,40,48,73,74,76,78,79,81,82,83,84,85,86,95],"160":[73,82,84,85],"16002":82,"1601":85,"16016":81,"16026":82,"1603":85,"16049":82,"1605":85,"1606":85,"1608":85,"1609":85,"161":[73,76,82,85],"1610":85,"1611":82,"1612":85,"16125":81,"1613":85,"16130":81,"1614":85,"16141":82,"1615":[75,85],"1616":82,"1617":85,"1618":85,"16185":81,"1619":[73,85],"16199":83,"162":[78,81,82,83,85],"16204":83,"16205":73,"1621":[82,85],"16213":83,"1622":85,"16223":83,"1623":[82,85],"16239":81,"1625":[82,85],"16252":83,"1626":[81,84,85],"1627":85,"1628":85,"16288":81,"1629":85,"163":[76,82,85],"1630":[81,82,85],"1631":85,"1632":[81,84,85],"1633":85,"1634":[82,85],"1635":85,"1636":85,"1637":85,"16373":81,"16379":81,"1638":85,"164":[73,76,82,85],"1640":85,"1641":85,"1642":83,"1643":85,"1644":85,"1645":[83,85],"1646":85,"1648":[82,85],"1649":85,"16491":81,"165":[76,82,85],"1650":85,"1651":82,"1653":[82,85],"1654":83,"1655":[82,85],"1656":85,"16563":76,"1657":85,"16573":84,"1658":85,"1659":85,"16592":84,"166":[73,82,84,85,96],"1660":85,"1661":[82,85],"1662":[82,85],"1663":85,"16635":84,"16636":84,"1664":85,"16640":76,"16646":81,"1665":85,"1666":82,"1667":82,"1668":[82,85],"167":[73,78,82,85],"1671":85,"1672":[82,85],"167233":76,"167251":82,"16728":81,"1673":85,"16738":85,"1674":85,"1676":85,"16762":83,"1677":85,"1678":85,"1679":85,"167e":81,"168":[73,82,85,87],"1680":85,"1681":85,"1682":85,"1683":85,"16869":81,"1687":85,"16875":82,"1688":85,"1689":85,"169":[73,76,82,84,85],"169049":82,"1692":85,"1693":85,"16938":82,"1694":85,"16947":82,"1695":[83,85],"16954":81,"1696":[83,85],"16967":81,"1697":[82,85],"1699":85,"17":[73,74,76,79,81,82,83,84,85,95],"170":[73,76,82,85],"1700":83,"1701":[49,85],"1702":85,"1702991":78,"1703":[82,85],"1704":82,"1705":[82,85],"17067":81,"1707":85,"17078":81,"17079":83,"1708":85,"1709":85,"17099":81,"171":[78,82,84,85],"1710":85,"1711":85,"1712":85,"17122":95,"1713":85,"1715":85,"17155":82,"1716":85,"1717":85,"17175":81,"1719":85,"172":[3,78,82,85],"1720":82,"1721":85,"1722":85,"1723":85,"172388":82,"1724":[82,85],"17247":84,"17249":84,"1725":84,"17253":81,"17261":81,"1727":[83,85],"1728":[84,85],"1729":[82,85],"172953":82,"173":[73,74,82,85],"1730":85,"173000":82,"1731":[82,85],"1732":85,"1734":[82,83,85],"1735":85,"17357":81,"1736":85,"1738":[83,85],"1739":[81,82],"174":[82,85],"1740":85,"1741":[82,85],"17418":81,"1742":[82,85],"174272":82,"1743":82,"1744":85,"17440":82,"1745":82,"174524":82,"174571":82,"1746":[81,82],"17462":82,"1747":85,"17471":82,"17474":82,"174747":82,"1748":85,"17487":82,"1749":[81,85],"175":[73,81,82,85],"1750":85,"1751":85,"1752":[82,85],"17531":84,"17534":81,"1754":85,"1756":83,"1759":85,"176":[82,84,85],"1760":85,"1761030":78,"17611":82,"1762":[82,85],"176224":82,"1763":85,"1764":85,"1765":85,"176545":82,"1766":82,"1769":85,"177":[73,81,82,85],"1770":85,"17706":81,"1772":81,"1773":82,"1774":85,"1776":85,"1777":[82,85],"17778":82,"178":[73,78,82,85],"1781":85,"1782":[82,85],"1783":85,"1784":85,"17851":81,"1786":[83,85],"17861":81,"17864":81,"1787":[82,85],"17871":85,"1788":82,"17887":95,"179":[82,85,95],"1790":85,"1792":82,"1794":85,"1795":[82,85],"1796":84,"17961":81,"1798":[82,85],"1799":85,"18":[53,59,60,73,74,75,76,77,78,79,81,82,83,84,85,95],"180":[53,73,76,82,85],"1800":84,"18025":81,"1803":81,"1805":85,"1806":[81,85],"180658":84,"1807":[82,85],"181":[82,85],"1810":85,"1812":84,"1814":83,"1817":81,"1818":85,"182":[82,84,85,95],"1820":85,"18212":81,"1822":85,"18238":81,"18246":82,"18283":81,"18285":82,"18294":82,"183":[82,85],"1830":83,"1833":82,"18338":81,"18343":82,"18353":81,"1836":85,"1837":82,"1838":[82,85],"184":[73,82,85],"1841":85,"1842":[82,85],"1843":74,"18439":81,"1844":87,"1845":84,"18454":81,"18468":81,"1848":82,"185":[73,76,82,85,86],"1851":85,"1852":85,"1853":82,"1856":83,"1859":84,"186":[73,76,79,82,85],"18605":82,"186145":81,"186203":81,"1864":[],"18643":81,"1865":85,"18662":81,"1868":85,"187":[76,82,85],"1870":[81,84],"18709":81,"1871":[82,85],"1872":81,"1873":[82,84],"18741":82,"1876":81,"1879":85,"188":[82,85],"1881":81,"18814":81,"1882":85,"1883":82,"18840":85,"1885":85,"18862":81,"18887":81,"1889":85,"189":[73,82,84,85],"1890":75,"1893":85,"1894":85,"1896":85,"1897":85,"18971":81,"189e":85,"19":[73,78,79,81,82,83,84,85,86,89,95],"190":[73,79,82,85],"19025":85,"1903":85,"19032":73,"19036":81,"1904":85,"1905":85,"1907":81,"19084":81,"191":[82,85,96],"19105":81,"1912":[81,85,95],"1913":85,"19137":81,"1914":85,"19154":81,"19159":73,"1916":85,"19177":73,"1918":85,"19181":81,"192":[3,73,76,82,85],"1920":82,"1921":95,"19222":81,"1923":82,"1924":81,"19246":81,"19257":81,"192715":81,"1928":85,"1929":83,"193":[74,76,82,85],"1930":[82,85],"1931":81,"1933":85,"193375":82,"1934":[81,82,85],"19349":81,"1935":86,"1937":85,"194":[45,46,47,50,51,73,82,85],"19437":81,"1944":85,"19453":81,"1947":85,"19485":81,"1949":85,"19499":81,"195":[73,78,82,85],"1950":85,"1951":81,"1955":82,"19575":85,"19584":85,"196":[76,82,85],"1960":85,"1963":82,"1965":81,"19655":81,"1967":2,"1969":82,"197":[82,84,85],"1976":97,"1979":85,"198":[76,82,85],"1982":[18,40],"19848":81,"19856":81,"1986":[11,85,97],"19861":81,"1987":0,"198709":82,"199":[2,73,81,82,84,85],"1992":[2,95],"19928":78,"1993":81,"199389":82,"1994":81,"1995":[82,97],"1997":[11,53,81,85],"1998":[11,83],"19984":81,"1999":[2,53,54,59,60,95],"1_integr":63,"1a":63,"1d":[11,53,82,85,86],"1e":[14,18,23,24,25,38,41,44,51,53,54,58,63],"1e4":[53,59,60],"1e6":63,"2":[0,1,2,3,4,7,11,14,16,18,22,33,35,38,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,58,59,60,61,62,63,64,66,68,69,72,73,74,76,78,79,80,81,83,84,85,86,87,93,95,96,99],"20":[11,14,16,38,40,41,46,47,48,51,53,54,58,59,60,63,64,66,72,73,74,75,78,79,81,82,83,84,85],"200":[47,50,53,54,63,69,72,73,76,82,84,85],"2000":[63,72,82,84],"20000":[77,78,82,85],"20011":84,"2002":[0,2,82],"2003":85,"2004":[11,35,64],"2005":83,"2006":[2,18,69],"20061":81,"2007":0,"2008":85,"201":[73,76,81,82,85],"2010":[0,53,59,60,79],"2011":[18,69,79,95],"2012":[91,95,99],"2013":[95,99],"20130324":95,"20130590":95,"2014":[11,40,95,99],"20149":81,"2015":[95,99],"2015_11_10":48,"2016":[83,95],"2017":[40,95,99],"20171":81,"20176":81,"2018":[18,40,75,79,89,95],"20187":81,"2019":[84,95],"202":[82,85],"2020":[11,35,82,95],"2021":[73,74,95],"2022":[72,91,95],"2023":[85,95,99],"2024":[11,95],"20247":81,"2025":95,"2029":82,"203":[73,81,82,84,85],"20306":85,"20324":76,"2033":83,"20340":81,"20347":83,"20368":76,"2038":[82,83,85],"204":[78,82,85],"20401":81,"20426":85,"2043":[81,85],"2045":85,"20453":85,"2047":[82,85],"205":[2,73,76,78,81,82,85],"2052":[82,85],"20521":81,"2053":85,"2055":75,"20587":84,"206":[82,85],"20602":85,"20605":85,"2061":[81,85],"2063":[82,83],"2065":82,"20676":81,"2069":[82,85],"20695":81,"20696":81,"207":[75,82,85],"2071":82,"2076":85,"20765":85,"20779":85,"20791":78,"20793":81,"208":[73,78,82,85],"20815":82,"20816":81,"20817":82,"2082":85,"20821":81,"20834":81,"20836":82,"2084":75,"20848":81,"2087":85,"20874":82,"20887":82,"20899":82,"209":[82,85],"20903":82,"20905":82,"20924":82,"20929":82,"20934":82,"20935":82,"20936":82,"20938":82,"20941":[82,85],"20942":82,"20943":81,"20944":[82,85],"20949":82,"20950":82,"20952":82,"209577":84,"20958":82,"20961":82,"20964":82,"209642":84,"209657":84,"20966":82,"20967":82,"209673":84,"2097":85,"20971":82,"209715":84,"20972":82,"209725":84,"20973":82,"209735":84,"20974":82,"20975":82,"20976":82,"20977":82,"209773":84,"209775":84,"20978":82,"209787":84,"20979":82,"20982":82,"20983":82,"20984":82,"20985":82,"20986":82,"20988":82,"2099":82,"20990":82,"20992":81,"20999":82,"20k":1,"20th":[47,54,63,66,69,72],"21":[73,75,76,77,78,79,81,82,83,84,85,86,87],"210":[78,82,85,86],"21000":82,"21001":82,"21005":82,"2101":85,"21012":82,"21022":82,"21025":82,"21027":82,"21028":82,"21029":82,"21033":82,"21039":82,"2104":85,"21047":81,"2105":[82,85],"21054":82,"21088":81,"2109":85,"211":[3,82,84,85],"2110":85,"2111":81,"21135":85,"2114":83,"21163":82,"21167":81,"21174":82,"21179":81,"2118":82,"21185":82,"21193":81,"212":[73,78,82,85],"2120":85,"21202":82,"21222":[76,82],"21232":85,"21235":82,"21236":82,"21239":82,"2125":[74,85],"21263":82,"2128":82,"21281":85,"2129":82,"213":[73,76,82,85],"21324":81,"2134":85,"21344":85,"21351":81,"21355":85,"2136":85,"21363":76,"2137":[81,85],"21371":85,"2138":81,"21382":81,"21387":81,"213880":84,"2139":83,"214":[78,82,85],"21401":76,"21403":81,"21423":[81,85],"21426":81,"2143":[84,85],"21432":85,"21436":81,"21443":81,"21449":85,"2145":82,"21454":81,"21460":85,"21465":81,"2148":85,"2149":85,"215":[78,82,85],"21500":85,"21502":81,"21506":81,"2153":[83,85],"21534":85,"2154":85,"21540":76,"2157":[82,85],"216":[82,85],"2162":85,"21635":81,"21636":76,"21637":76,"21639":76,"2164":85,"21647":85,"21649":76,"21656":81,"2166":81,"2168":82,"21691":81,"217":[82,85],"21713":82,"2173":[83,85],"21735":81,"21740":82,"21747":83,"2176":[81,82],"21765":82,"2177":82,"21773":85,"21775":85,"2178":73,"2179":82,"21795":82,"218":[73,82,85],"2180":83,"21806":82,"21809":82,"21821":82,"21822":82,"21823":81,"21826":82,"21827":85,"218270":89,"2183":82,"21831":82,"21832":82,"21833":82,"2184":82,"21844":82,"21845":82,"218506":85,"218549":85,"21858":81,"2186":85,"2187":[82,85],"21889":82,"2189":76,"21894":81,"21896":82,"219":[3,73,82,85],"2191":85,"2192":85,"21923":81,"21926":81,"2193":74,"21934":82,"2194":82,"21948":82,"2196":85,"21965":85,"2197":79,"21991":85,"21a":84,"21b":84,"21c":84,"22":[2,3,73,75,76,77,78,81,82,83,84,85,95,96],"220":[73,82,85],"2202":82,"22074":82,"2208":84,"22084":76,"2209":85,"22093":81,"221":[82,85,96],"2211":85,"22118":81,"22119":85,"2213":82,"2214":85,"22178":85,"22185":85,"22193":81,"222":[75,76,82,84,85],"22220":85,"2223":85,"22246":81,"2226":83,"2227":83,"22276":85,"22286":85,"2229":85,"223":[73,82,85],"2231":81,"22329":81,"2233":85,"2234":[82,85,86],"2235":81,"22352":81,"2236":82,"2237":[82,84,85],"2238":82,"22388":85,"224":[73,81,82,85],"2242":82,"22424e":85,"2243":[82,85],"22430":85,"22443":81,"2245":85,"2246":[82,85],"22463":85,"2247":82,"22482":81,"225":[73,76,82,84,85],"2250":82,"2251":82,"2252":[81,82],"2253":82,"22531":81,"225332":85,"2254":81,"2255":[82,84],"22555":76,"22562":82,"22587":81,"2259":82,"226":[76,82,85],"2260":[82,85],"22605":82,"22611":81,"22621":85,"2263":85,"22640868":95,"2266":82,"22665786":95,"22668":81,"2267":85,"2268":82,"2269":85,"227":[76,81,82,84,85],"2270":[81,84],"22700":85,"2271":81,"22713":81,"2272":[82,84],"22722":81,"22740":81,"2275":82,"22759":85,"22761":81,"22762":85,"22766":85,"22780":85,"228":[82,85],"2280":85,"2281":85,"2282":85,"2283":85,"2284":82,"228434":85,"22844":82,"2285":84,"2287":85,"2288":84,"2289":81,"229":[82,85],"2290":82,"22907":85,"22936":81,"22938":85,"2294":85,"22943":76,"22949":85,"2296":85,"2298":82,"2299":82,"22nd":99,"23":[73,74,75,76,77,78,81,82,83,84,85],"230":[40,69,72,82,85],"2300":85,"23008":85,"2301":85,"2302":85,"2304":85,"23046":85,"2306":84,"2308":82,"23081":81,"2309":85,"231":[76,81,82,85],"23105":81,"23108":82,"2312":82,"23127":81,"2313":82,"2315":85,"2316":82,"2317":81,"2319":[82,85],"232":[73,82,83,85,95],"23215":81,"2327":82,"23278":85,"23289":81,"233":[82,85],"2330":[83,85],"2331":81,"23317":78,"2332":[82,85],"2333":[82,85],"23331":82,"2334":83,"23343":82,"2336":85,"23386":82,"23389":81,"2339":85,"23395":81,"234":[82,85],"23402":82,"23403":82,"23413188":95,"2342":[82,85],"23437":81,"2344":85,"2346":81,"2347":[82,85],"2348":81,"23485":81,"2349":85,"23494":81,"23495":81,"235":[79,82,84,85],"23507":84,"2351":82,"2352":82,"2353":85,"23531":85,"2354":85,"23553":81,"2357":85,"2359":[81,85],"236":[81,82,85],"2361":[81,82],"23623":81,"2363":82,"2364":[83,85],"2366":[84,85],"23663":81,"23689":81,"2369":85,"23691":81,"237":[82,84,85],"23706":81,"2371":82,"2372":84,"2373":85,"2374":83,"23751":85,"2376":83,"2377":82,"2378":85,"23781811553089":3,"23793153":95,"238":[76,81,82,85],"2380":85,"23809":81,"2381":82,"2382":81,"23820":81,"2383":81,"2384":85,"23841":81,"2385":81,"2386":85,"23864":81,"2387":[84,87],"23872":81,"23873":81,"23877":85,"2388":82,"23881":81,"23884":81,"23887":85,"2389":81,"23895":83,"239":[76,82,84,85,95],"2390":81,"2392":81,"23965":81,"2398":[83,85],"23983":81,"23985":85,"24":[73,76,77,78,81,82,83,84,85,95],"240":[76,82,85],"24000":81,"24005":81,"2401":85,"24016":81,"24019":81,"24022":81,"2403":85,"24032":73,"240463":84,"2406":85,"24069":84,"2409":[83,85],"241":[78,81,82,85],"2410":82,"2412":[83,85],"24126":81,"2414":82,"2418":85,"242":[73,79,82,84,85,95],"24206":81,"2421":85,"24217":81,"2424":82,"2425":85,"24255":83,"2426":85,"24269":81,"24276":81,"24289":81,"243":[82,85],"24300":82,"24303":81,"24305":81,"2431":85,"24326":81,"24331":[81,84],"24338":[85,86],"2434":85,"24341":85,"2435":85,"2437":85,"24376":81,"24379":81,"2438":[82,85],"24389":81,"2439":82,"24397":81,"244":[78,82,85],"24425":81,"2443":85,"24452":85,"2447":81,"2448":85,"245":[0,82,84,85],"2450":85,"24507":81,"24507780":95,"24510":81,"2453":83,"24538":81,"24540":81,"24541":83,"24546":81,"2455":85,"24552":81,"2456":[74,82],"2457":85,"24576":85,"2458":85,"24586":81,"2459":85,"24597":81,"246":[73,76,82,83,85],"2460":85,"24607":81,"24614":81,"2462":85,"24623":81,"24629":81,"2463":[3,82,85],"24631":81,"24633409":95,"2464":85,"24652":81,"2466":[81,85],"247":[81,82,85],"2470":85,"24704":85,"24706":81,"2474":82,"24742":81,"24748":81,"2475":[75,84],"24755":81,"24757":81,"247651":76,"2478":85,"24780":81,"2479":85,"24795":81,"248":[73,82,85],"2480":[84,85],"2481":[82,84],"24812":81,"24816":84,"2482":85,"24826":81,"2484":85,"24848":84,"2486":82,"24860":81,"24863":81,"2488":[81,85],"24889":81,"249":[73,82,85],"2490":84,"24901":81,"2491":85,"24914152":95,"24914169":95,"24929":81,"2494":[82,84],"24972":81,"24978":81,"2498":85,"24988":81,"2499":[82,83,85],"24999":81,"25":[1,11,43,47,53,63,73,74,75,76,78,79,81,82,83,84,85],"250":[47,54,63,69,72,76,81,82,85,95],"25006873":95,"2501":85,"25013":83,"25018":81,"2502":85,"25023":81,"25027":84,"2503":82,"25031":81,"25051":81,"25053":85,"25058":81,"25059":81,"2506":85,"25067":81,"2508":85,"25098":85,"251":[73,82,85,87],"2510":83,"25119":81,"2512":[82,84],"2513":82,"25135":81,"25136092":95,"25139":83,"25140":81,"251517":84,"2516":85,"25183":85,"25187":81,"25193":81,"25198":81,"252":[76,81,82,85],"25214":81,"2522":85,"25226":81,"2523":85,"25232":84,"25238":81,"25242914":95,"2525":85,"2526":83,"2527":[3,82,85],"2528":85,"25285":81,"25286849":95,"2529":85,"253":[73,82,85],"2530":85,"2531":[81,82],"25318":81,"2532":82,"25323":81,"2533":85,"25357":81,"2536":85,"25362050":95,"2539":85,"254":[76,78,81,82,85],"2540":84,"25415":79,"2542":85,"2543":85,"25438":81,"25442":81,"2545":85,"25453":81,"25453071":95,"2546":85,"25461":81,"25474":81,"25478847":95,"25479":81,"2548":85,"25484844":95,"2549":85,"255":[40,73,75,82,85],"25506":81,"2551":85,"25511":81,"255222":85,"2554":85,"25547":81,"2555":83,"25565":81,"2557":82,"25577":81,"2558":85,"255800":76,"25585":81,"2559":85,"25596":81,"256":[53,73,75,78,82,85,86],"2560":85,"25608":85,"2564":[78,85],"2565":[82,85],"25657":81,"2566":85,"25661":81,"25664746":95,"25664747":95,"2567":85,"25673":81,"25676":81,"25686":83,"25694":81,"25696":81,"25697":85,"256\u00b3":[82,85,86],"257":[73,78,79,82,85],"2570":85,"25710":81,"25717":81,"25720":81,"25723925":95,"2573":85,"25735":81,"2574":85,"25741":81,"25744":81,"25751308":95,"2576":[82,85],"25765":81,"25766":81,"2577":85,"2578":74,"25781":81,"25781634":95,"25787":81,"258":[76,81,82,85],"2582":85,"25844":81,"25846":81,"2585":82,"2588":81,"2589":85,"259":[73,78,81,82,85],"25901":81,"25925":81,"2593":85,"25938":81,"2594":82,"259450":82,"2595":85,"2596":83,"25965":81,"2597":[82,85],"25988":81,"26":[73,74,75,77,78,81,82,83,84,85,95,96],"260":[73,75,81,82,85],"26008":81,"2601":85,"26023":81,"2603":85,"2604":82,"26057680":95,"2606":85,"26069":81,"2607":85,"2608":81,"2609":81,"261":[73,78,82,85,95],"2610":85,"2611":81,"26118":81,"26121":83,"2613":82,"26130":85,"2614":85,"2615":85,"2618":85,"2619":85,"26191":81,"262":[73,75,82,83,85],"2620":[83,85],"2621":84,"26214":85,"26215":81,"2623":82,"26244":81,"2625":[84,85],"2626":85,"26279":85,"26280336":95,"26289":81,"2629":85,"263":[49,73,76,82,84,85],"26305":85,"2631":85,"2632":82,"26334":81,"2634":85,"26341":81,"2635":85,"26352473":95,"2639":84,"264":[73,82,85],"2640":85,"26413":84,"26422513":95,"2643":81,"2645":85,"2646":85,"26476":81,"2648":82,"26482":81,"26494":81,"265":[73,78,81,82,85],"26503":[85,86],"26504":81,"2651":85,"2652":[11,95],"2653":85,"26549":81,"26569":81,"2657":85,"26575":81,"2658":[82,85],"266":[73,78,82,85],"2660":85,"26616":81,"26646":81,"26659":81,"2666":[11,81,85],"26661":81,"26682":81,"2669":85,"267":[73,81,82,84,85],"2671":81,"2673":85,"2675":85,"267504":74,"26755":83,"26774":81,"2679":82,"268":[73,78,81,82,85],"2680":85,"2681":85,"2684":84,"2685":85,"2686":81,"2687":85,"26874":82,"26887":81,"2689":82,"26898":81,"269":[81,82,85],"2690":85,"2691":[81,82],"26914":85,"2692":85,"26933":81,"26934":83,"2698":85,"2699":85,"27":[73,75,77,78,81,82,83,84,85],"270":[82,85,95],"2700":85,"2701":[82,85],"2705":[74,85],"27050135":95,"2706":[82,85],"2708":[83,85],"27085":81,"271":[81,82,85],"2711":83,"27121":81,"27127":81,"2714":85,"27143":81,"27169":81,"27181":81,"27191":83,"272":[73,76,78,82,85],"2721":85,"2723":76,"2724":81,"2726":85,"27266":81,"2727":83,"27272":81,"2728":[81,82],"2729":78,"273":[82,85],"2731":85,"2732":85,"27324":85,"27368":81,"274":[73,81,82,85],"27402":81,"2741":85,"2742":85,"27443":83,"27452":83,"2747":85,"27486":81,"27493":81,"275":[76,82,85],"27504":84,"2751":81,"2752":85,"27533":83,"2757":81,"27575":81,"2758":[81,85],"276":[73,82,85],"2761":85,"2763":81,"2765":85,"2766":85,"27665":81,"2767":[82,85],"2768":84,"27680699":95,"2769":85,"277":[73,82,85],"2770":82,"2772":81,"27743":81,"278":[76,81,82,84,85],"27804":[81,84],"2782":85,"27828":85,"2784":82,"27842":83,"27855":83,"27862":83,"2787":85,"27871088":95,"2788":82,"2789":85,"279":[82,85],"2790":85,"2791":85,"2792":78,"27939":81,"2794":85,"2796":85,"27977":81,"2798":[81,85],"27980508":95,"2799":[74,85],"27_dial":76,"27_refined_cel":76,"28":[11,73,78,81,82,83,84,85,86,95],"280":[82,85,86],"2800":85,"2802":85,"2804":[82,85],"2806":[81,85],"2807":85,"281":[81,82,85],"2810":[83,85],"2811":85,"2812":85,"2814":85,"2816":85,"2817":85,"2818":85,"28197":85,"282":[18,69,73,82,85],"2820":85,"28205":81,"28219":85,"2822":84,"2824":81,"28243":83,"28257":84,"2826":81,"2827":85,"2828":85,"2829":81,"28293":83,"283":[78,82,85],"28303":85,"28308":81,"2832":85,"283277":86,"2835":81,"2837":85,"284":[82,85],"28409":81,"2841":85,"2842":82,"2843":85,"28466":81,"285":[73,82,85],"2851":78,"28525":81,"28535":82,"28538":83,"2856":[83,85],"28579":85,"28586":81,"286":[73,81,82,84,85],"2863":85,"2867":85,"2868":85,"2869":83,"28695":81,"287":[73,82,85,95],"2870":85,"2873":[81,85],"2874":85,"2875":85,"2876":[78,82,85],"28764":85,"28766":81,"28776":85,"2878":84,"28785":83,"288":[73,82,85],"2881":85,"2882":[84,85],"2883":85,"28835537":95,"2886":85,"28874":81,"2889":85,"289":[73,82,85],"28915":81,"2893":85,"28935":74,"2894":85,"2896":85,"28981":83,"28989718":95,"28_dial":76,"28_scale":76,"28_scaled_unmerg":76,"29":[73,74,75,77,78,81,82,83,84,85,86,96],"290":[73,82,85],"29002":81,"29009":81,"2902":85,"2903":85,"2904":78,"2908":85,"29087":81,"291":[73,74,82,85],"2911":85,"29114":84,"2912":83,"2916":[73,81],"292":[18,69,73,76,81,82,85],"2920":82,"2921":85,"2922":85,"2924":78,"2928":83,"293":[82,85],"29306":81,"29307":83,"29309":81,"2931":85,"2933":81,"2936":82,"2937":[73,82],"2938":[82,85],"294":[73,81,82,85],"29400":73,"2941":85,"2946":85,"2947":85,"2948":85,"2949":85,"2949728":78,"295":[73,82,85],"2951":[84,85],"2952":81,"2953":85,"29533234":95,"29543":81,"29556":81,"295803077552249":3,"29589":81,"2959":82,"29594":85,"296":[73,82,85],"2961":85,"29632":83,"2964":85,"2965":85,"2966":85,"29662":83,"29667":83,"2967":85,"29673":81,"29676":84,"2968":85,"29682":81,"29697":81,"297":[81,82,83,85],"2971":85,"29717711":95,"2975":85,"2976":81,"29764":83,"2977":85,"2978":83,"2979":82,"298":[81,82,85],"2981":[82,85],"2985":[83,85],"29869":81,"29872002":[75,95],"2988":85,"29881":81,"299":[73,82,83,85],"29905":81,"2992":78,"29952":83,"2996":[78,85],"29998":82,"29_dial":76,"29m36":83,"2_1":[75,77],"2_integr":63,"2d":[1,2,12,14,47,54,63,98],"2f":44,"2ul":[10,12,26],"2\u03b8":[47,51,70,72],"3":[0,1,2,3,6,11,15,18,22,33,35,37,39,40,41,43,45,47,48,50,51,52,53,54,57,58,59,60,61,62,63,64,68,72,73,74,76,77,78,79,80,81,82,83,84,85,86,87,95,96,99],"30":[11,45,53,66,73,74,75,81,82,83,84,85,86,95,97],"300":[53,59,60,75,76,82,83,85],"3004":85,"30046":81,"3005":[78,85],"30057":81,"3006":85,"30075":81,"3008":85,"300879":76,"3009":85,"301":[82,85],"3010":85,"3013":85,"301412":76,"3016":85,"3019":85,"30198898":95,"302":[73,82,85],"3020":85,"3022":85,"30225":83,"30251":81,"30274":81,"3028":85,"3029":81,"303":[81,82,85],"3033":82,"30346":81,"3035":[81,85],"30358":83,"3036":85,"3037":85,"30376":82,"30387":83,"304":[73,82,85],"30405241":95,"3044":85,"3045":85,"30452":85,"3046":85,"30468":85,"304888":76,"30499":85,"305":[75,82,85],"3051":82,"30513":85,"3052":85,"30539":81,"3054":85,"3055":85,"30551":81,"3056":81,"3057":85,"3057089":78,"3059":85,"306":[73,82,85],"3061":85,"3062":85,"30649":83,"307":[73,81,82,85],"3072":85,"3073":78,"3075":85,"3076":81,"3077":85,"3079":81,"308":[82,85,86],"3080":85,"3082":[82,84],"3083":85,"30869":81,"3087":85,"309":[75,82,85,95],"3091":82,"3093":85,"3095":85,"30950396":95,"3096":85,"3097":[78,85],"30996":81,"31":[11,35,73,74,76,81,82,83,84,85,95],"310":[73,82,85],"3100":85,"31004":81,"3103":85,"3106":85,"3108":85,"31088":81,"3109":85,"311":[82,85],"3110":85,"3111":85,"3112":85,"3114":85,"3119":85,"312":[73,82,85],"3120":85,"312217":85,"31232":81,"3126":85,"31271":81,"3129":85,"313":[82,84,85],"31331":81,"3134":85,"3135":78,"3139":[78,85],"313909":85,"314":[73,82,85],"3140":85,"3143":85,"3145":[82,85],"3147":78,"315":[73,76,82,85],"3151":[78,85],"3155":85,"3156":78,"3157":85,"31578":83,"316":[76,82,84,85],"31601":81,"3161":85,"31614":81,"3165":85,"3166":85,"3167":85,"31692470":95,"317":[74,82,85],"3171":85,"31716":81,"31728":81,"31729":81,"317393":81,"317541":81,"3176":83,"3177":[84,85],"3178":85,"3179":85,"318":[73,82,85],"3181":83,"3184":85,"3186":85,"3187":85,"3189":85,"31898":83,"319":[76,82,85],"3190":85,"3191":85,"31911":81,"3193":85,"31962":81,"3198":85,"3199":85,"32":[53,73,75,76,81,82,83,84,85,96],"320":[82,85],"3200":82,"32007":81,"32036":81,"3205385":78,"3206":85,"3207":[84,85],"3208":85,"3209":81,"32094":81,"321":[76,82,85],"3210":85,"3212":85,"32129":81,"321472":79,"3216":81,"3217":85,"321968":76,"322":[73,76,82,85],"3221":85,"3223":85,"3225":85,"32254063":95,"3226":84,"32288":83,"3229":[82,84],"323":[73,82,85],"3230":82,"3232":78,"3233":[78,85],"3234":85,"3235":85,"3236":85,"3237":[82,85],"3238":81,"3239":85,"324":[73,81,82,85],"3240":83,"3246":84,"324982":85,"325":[82,85],"325074":85,"325075":85,"325191":85,"3252":85,"325380":85,"325381":85,"325386":85,"32568":81,"3258":85,"326":[73,82,85],"3261":85,"3262":85,"32623":83,"3263":85,"3264":85,"32645":81,"32658":84,"3266":85,"3267":85,"327":[73,78,81,82,85],"3270":85,"327040":85,"327078":85,"3271":85,"3272":85,"3275":85,"3276":81,"32768":53,"328":[73,74,79,82,85],"3280":85,"3281":[81,85],"3285":81,"32850967":95,"3286":85,"32879":81,"3288791":78,"3289":[78,84],"329":[82,85],"329035":82,"3291":85,"3294":85,"3295":85,"3296":85,"3297":84,"3297608":78,"3299":[85,95],"33":[73,75,76,77,81,82,83,84,85,96],"330":[82,85],"3301":85,"33030237":[73,95],"3307":85,"331":[73,76,78,81,82,84,85],"3311":83,"3314":85,"33153":81,"3317":85,"331750":81,"3318":85,"3319":82,"331984":81,"332":[73,82,85],"3321":[82,85],"3324":85,"3328":85,"3329":85,"333":[73,81,82,85],"33333":14,"33371":81,"33398":81,"334":[73,82,85],"33404":81,"3341":85,"3342":[83,85],"33424":81,"3346":[83,85],"3347":85,"3348":85,"335":[74,76,82,85],"3353":85,"33544":81,"3355":85,"3357":85,"3358310":78,"33596":84,"336":[74,82,85],"3360":85,"3362":87,"33684":82,"3369":84,"337":[82,85],"3375":84,"338":[45,46,47,50,51,76,82,85],"33809":83,"3381":85,"33843":81,"338446":81,"3385":85,"338516":77,"338720":81,"338728":77,"33883":84,"33884":84,"339":[78,79,82,85],"3392":85,"33972532":74,"34":[73,76,78,81,82,83,84,85],"340":[73,81,82,85,95],"3400":[84,85],"3401":82,"3403":85,"3404":85,"3406":85,"3408":82,"341":[82,85],"3414":85,"342":[82,85],"34229":73,"3423":85,"34241":81,"3427":85,"34275":82,"3428":85,"3429":85,"343":[81,82,84,85],"34304":81,"3431":85,"34327213":[73,95],"3433":85,"344":[82,85],"3441":85,"3443":85,"34444":83,"3446":85,"34464":83,"345":[54,73,75,82,84,85],"3451":85,"34512":81,"3454":82,"34551":84,"3459":85,"346":[40,73,76,82,85],"34611":81,"3462":85,"3466":85,"3466356":78,"34664":81,"3468":85,"347":[73,82,85],"3471":85,"34747533":95,"3477":85,"3479":85,"348":[82,85],"3484342":78,"3489":81,"349":[82,85],"3490":81,"3491":85,"34911":83,"3493":85,"3494":85,"3495":[82,85],"3499":83,"35":[0,2,3,73,74,77,81,82,83,84,85],"350":[64,73,82,85],"35019":81,"35046599":95,"3507":82,"3508":83,"3509":85,"351":[82,85],"3510":35,"3512":85,"35145":81,"3515":85,"352":[49,73,82,85,95],"35204":83,"35249":81,"3525":[75,85],"353":[73,78,82,85],"35304":83,"3531":85,"35339":81,"3535":85,"3538":85,"3539":85,"35395":83,"354":[82,85],"35422":84,"3544":85,"3545":85,"35469":85,"3547":85,"3548":85,"35488":81,"3549":85,"35492":84,"355":[82,85],"3551":85,"3554":85,"3555":83,"3558":81,"35593":84,"356":[79,82,85],"3560":81,"3561":81,"35610":85,"3562":85,"35647922":95,"3565":81,"357":[82,85,95],"3570":85,"3574":82,"3576":85,"3578":85,"35789":81,"358":[75,82,85],"3581":[81,85],"3584":85,"3589":[82,85],"359":[73,76,82,83,85],"35943":83,"3599":85,"36":[40,53,59,60,73,76,81,82,83,84,85],"360":[40,81,82,85,86,95],"36000":[85,86],"3601":85,"3602":85,"3603":85,"361":[73,82,85],"3611":85,"36137":83,"3619":85,"362":[82,85,86],"3621":85,"3623":85,"3624":85,"3624346":78,"36268":81,"363":[73,82,85],"3631":85,"3632":85,"36377":81,"36386":83,"364":[73,81,82,85],"3640":85,"3641":85,"3645":85,"36458":81,"3646":85,"3648":85,"36483":81,"365":[73,76,82,85,95],"3653":85,"36559":81,"3658":85,"3659":85,"366":[73,76,81,82,85],"366021":85,"36619":81,"3662":85,"36662":74,"367":[82,85],"36708":81,"3671":85,"36731":81,"3674":85,"3674101744536096":76,"3677":85,"36776":81,"3678":85,"36795":81,"368":[82,85],"3681":85,"3682":85,"3683":81,"3685":85,"36858":81,"368590":85,"368701":85,"3688":85,"36893":81,"369":[82,84,85,95],"3690":85,"3691":85,"36952226":95,"36983":81,"3699":82,"37":[11,53,64,73,74,76,77,81,82,83,84,85],"370":[76,81,82,85],"37002":81,"3701":85,"3707":85,"37074":83,"371":[73,76,82,84,85],"3711":85,"37138085":95,"37139":83,"3717":85,"3718":[78,85],"372":[82,84,85],"3723":74,"3725":81,"3729":85,"373":[82,85],"3730":85,"37309":81,"3730940":82,"3733":82,"37366":81,"3737":[81,85],"37377":81,"374":[73,82,85],"37408":81,"3745":[82,85],"37466":84,"375":[73,82,85,86],"3752":85,"37528":81,"37536337":95,"3754":85,"37577":81,"37586":83,"376":[82,85],"3765":83,"3767":85,"377":[82,85],"3771":85,"3772":85,"3776":[81,85],"37797025":95,"378":[82,83,85],"37822":81,"37838":81,"37843":81,"3788":85,"379":[73,82,85],"3790":85,"38":[3,40,73,76,78,81,82,83,84,85,96],"380":[82,85],"3800":81,"3803":81,"3806":82,"3808":82,"3809":85,"381":[82,85],"3810":84,"3811":85,"3813":84,"38155":81,"3816":85,"382":[82,85,95],"3822":85,"3828":85,"383":[82,85],"38322":81,"3834":85,"3835":81,"3836":85,"38365":81,"3837":85,"38373":81,"384":[82,84,85],"385":[82,85,95],"38505":81,"38555":81,"3857":85,"38596":83,"386":[73,82,85],"38606":83,"3861":85,"3862":82,"3864":85,"3865":[82,85],"3866":85,"3867":85,"387":[82,85],"3873":85,"3876":85,"388":[82,85],"3881":85,"38874":81,"38875":81,"38894":81,"38899":81,"389":[73,76,82,85],"3894":[82,85],"38962":81,"3898":82,"3899":[82,85],"39":[73,77,78,81,82,83,84,85,96],"390":[82,83,85],"39065":81,"3908":81,"3909":81,"391":[82,85,86],"3911":85,"3916":82,"392":[82,83,85],"39219":81,"39220700":95,"39228":81,"39245":83,"39246":81,"3926":85,"3928":85,"39294":83,"393":[73,82,85],"39314":81,"3932":85,"3933":82,"3934":85,"3935":81,"39386198":95,"3939":82,"394":[73,81,82,84,85],"3943":82,"39465":81,"39499":81,"395":[82,85],"3951":85,"3959":85,"396":[82,85],"39641675":95,"39675":81,"3968":82,"39692":81,"397":[73,82,85],"39711":81,"3973":85,"39733":85,"398":[82,85],"39851":81,"399":[11,64,76,82,83,84,85,95],"39922":83,"3d":[1,11,12,47,52,53,63,74,82,83,85,86,95,96,98],"3ded":[74,80],"3deg":40,"3e":87,"3rd":97,"4":[0,1,2,3,11,16,18,22,33,35,40,43,44,45,46,47,48,50,51,53,54,60,63,64,69,70,72,73,74,76,77,78,79,81,82,83,84,85,86,87,95,97],"40":[62,73,74,76,81,82,83,84,85,86,96],"400":[64,76,81,82,84,85],"400223":76,"40028":81,"40052":81,"401":[82,83,85],"40106":81,"4011":82,"40123":83,"40137":81,"4014":[82,85],"40149":81,"4015":82,"40151":81,"4018":82,"40185":81,"40191":81,"402":[82,85],"4020":0,"40232":82,"4024":85,"4026":82,"4029":81,"40298":83,"403":[74,82,83,85],"4034":82,"40342":81,"4038":81,"404":[82,85],"4041":82,"4049":81,"405":[18,40,81,82,83,85,95],"4052":85,"40525":81,"4055":85,"4056":85,"40577":81,"4059":[84,85],"406":[81,82,85],"40658":81,"4068":85,"407":[11,82,85],"4071":85,"40725":81,"4074":85,"4075":[82,85],"4076":[82,85],"4079":82,"408":[73,82,85],"40816":81,"4082":85,"40848":81,"4085":85,"40867":81,"4089":82,"409":[11,64,73,81,82,84,85],"4093":85,"40955":81,"41":[0,73,75,78,79,81,82,83,85,87],"410":[18,40,82,85,95],"41024":81,"4103":81,"4104":[82,85],"4105":85,"41055":81,"411":[81,82,85],"4111":[81,82],"4112":82,"41136":86,"4114":82,"41145":81,"41177":81,"412":[82,84,85],"4121":82,"4122":81,"4128":81,"413":[11,73,82,85],"4130":82,"41311":81,"414":[82,85],"4141":82,"41469":83,"4147":82,"4148":82,"415":[82,85],"4150":82,"41568":83,"41585":81,"415898":76,"416":[82,85],"4161":82,"41623":85,"4164":85,"41673":81,"417":[81,82,84,85],"41713":81,"4172":82,"418":[82,85],"41832":84,"419":[73,74,82,85],"42":[4,53,59,60,64,72,76,78,81,82,83,84,85,86,96],"420":[82,85],"42044":81,"42048":76,"421":[73,76,82,84,85,95],"4212":87,"42183":87,"422":[73,76,82,85],"4229":79,"423":[73,82,85],"424":[73,82,85],"4242":4,"4243":82,"42447":81,"4247":81,"42478":[82,83],"4249":81,"425":[81,82,84,85,95],"4256":82,"42575":81,"426":[73,82,85],"4263":[84,85],"4265":81,"4266":85,"42663":81,"42672":81,"4268":85,"427":[73,82,85],"42778":81,"428":[73,82,85],"42802":81,"42803":81,"42879":85,"42881":81,"4289":85,"429":[73,74,81,82,85],"4290":85,"43":[73,78,79,81,82,83,84,85,95],"430":[82,85],"4306":85,"43068":81,"431":[82,85],"4310":81,"43153":81,"432":[73,82,85],"43205":81,"4328":74,"433":[82,85],"43312":81,"4332":85,"43388":81,"434":[82,85],"4340":82,"43408":81,"4341":85,"4345":78,"43483":81,"435":[74,82,85],"4352":83,"43547":81,"436":[73,82,85],"43612":82,"43642":82,"43661":82,"4368":85,"437":[78,82,85],"4371":95,"4372":85,"43778":82,"4378":81,"4379":81,"438":[75,82,85],"4380":85,"439":[73,76,82,85],"43944":82,"4396":82,"44":[48,78,81,82,83,84,85],"440":[82,85],"44019":81,"44084":81,"441":[82,84,85],"44117":81,"442":[73,82,85],"44268":81,"443":[82,85],"44329":82,"4433":82,"44341":82,"444":[2,76,82,83,85],"4446":85,"445":[82,84,85],"44533":81,"44535":82,"4455":85,"446":[82,85],"44653":81,"447":[81,82,85],"44711":81,"44719":81,"4474":82,"44757":81,"448":[76,82,85],"449":[82,85],"44911":81,"44932":81,"4497":85,"44994":81,"45":[11,53,73,74,75,76,78,81,82,83,84,85,87],"450":[82,85],"45054":81,"4508":74,"451":[82,85],"4516":85,"452":[73,74,82,85],"453":[82,85,95],"45303890619488":3,"45355":81,"454":[74,82,85],"455":[73,74,82,84,85],"45501":81,"45551":82,"45564":81,"4557":82,"456":[82,85],"45694":84,"457":[2,81,82,85,95],"4575":82,"458":[2,81,82,85],"459":[73,82,85],"46":[49,73,76,79,81,82,83,84,85],"460":[74,82,84,85],"46071":81,"461":[76,82,85],"46152":84,"46181":81,"462":[82,85],"46232":81,"46252":81,"46257":83,"4629":82,"46291":83,"463":[76,82,85],"46301":81,"46307e":85,"46332":84,"46365":81,"464":[2,82,85],"465":85,"466":[82,85],"466492":84,"46698":81,"467":[81,82,85],"4675":85,"468":[82,85],"46806":82,"46855":83,"469":[82,85],"46902":83,"46907":81,"46951":83,"4698317405529955":3,"47":[40,74,75,81,82,83,84,85,95],"470":[82,85],"4701":81,"4707":81,"47078":81,"471":[73,82,85],"47124":81,"4718":73,"472":[73,81,82,85],"472000":84,"47213":83,"47216":81,"47248":81,"4727":82,"4729":[79,85],"473":[82,85],"47301":82,"47338":81,"47367":82,"474":[82,85],"47416":82,"4747":81,"475":[73,82,85],"47572":81,"476":[81,82,85],"47639":82,"47678":83,"477":[73,82,85],"47752":82,"47797":81,"478":[81,82,85],"47841":81,"47859":82,"4786":82,"479":[82,85],"48":[73,76,77,78,81,82,83,84,85,95],"480":[81,82,85],"4802":82,"48028":81,"48053":83,"48077":81,"48078":81,"48084":81,"481":[73,82,85],"48132":81,"4815":82,"48186":81,"4819":83,"482":[76,82,85],"4822":85,"483":[73,82,85],"4836":81,"4838":81,"484":[82,85],"4840":82,"4849":74,"485":[75,78,82,85],"48533":85,"4856":73,"48569":81,"486":[73,82,85,95],"48625":83,"48667":81,"487":[81,82,84,85],"487536":84,"48767":82,"488":[82,85],"48806":84,"4886":85,"4889":73,"489":[82,85],"48906":81,"4895":82,"48977":82,"49":[73,81,82,83,84,85,87,95],"490":[73,76,82,85],"491":[73,82,85,95],"49115":81,"49117":85,"4917":[74,81],"492":[73,81,82,85],"49243":85,"493":[73,82,85],"49387":83,"494":[81,82,83,84,85],"4940":82,"4945":81,"49473":82,"4949":82,"495":[73,82,85],"495976":3,"496":[81,82,85],"49667":82,"497":[82,85],"498":[45,46,47,50,51,82,84,85],"49823":82,"498876":84,"499":[82,84,85],"499425":84,"4a":99,"4b":99,"4e":40,"5":[0,1,2,3,6,11,21,33,40,41,44,45,46,47,48,50,51,53,54,58,59,60,63,64,66,72,73,74,76,77,78,79,81,82,83,84,85,86,87,95,97,99],"50":[1,16,40,41,43,50,51,53,54,55,58,72,73,78,81,82,83,84,85],"500":[53,59,60,73,75,82,85],"5000":[40,72,73],"50000":[63,73],"500054":84,"50058":81,"501":[82,85],"50131":83,"50161":83,"502":[82,83,85],"50236":82,"50239":85,"50244":85,"50249":82,"50269":[82,85],"503":[73,79,82,85],"504":[75,82,85],"50436":81,"5046":84,"505":[73,82,85],"5056":85,"50568":81,"506":[73,75,82,85,95],"50635":81,"5064":83,"50654":81,"50688":82,"50699":83,"507":[73,82,85],"50746":81,"5078":82,"5079":85,"508":[76,82,84,85],"50846":83,"509":[82,85],"50948":78,"51":[0,73,75,76,77,78,79,81,82,83,84,85],"510":[82,85],"5100":81,"51078":83,"511":[82,85],"51129":81,"5117":85,"512":[82,85],"5123":81,"51263":81,"513":[73,82,85],"51306":81,"51380":82,"514":[73,75,82,85],"51405":87,"5144":81,"51458":82,"5147":84,"515":[75,82,85],"51574":81,"516":85,"51628":83,"517":[82,84,85],"51747":74,"51758":83,"518":[75,82,85,95],"5181":83,"51832":81,"51841":82,"519":[73,76,78,81,82,85],"5198":84,"52":[40,73,78,81,82,83,84,85],"520":[73,82,85],"521":[78,81,85],"52198":82,"522":[76,78,82,85],"52206":82,"52255":83,"5227":83,"523":[73,82,85],"5239":85,"524":[82,85],"525":[76,81,82,85,95],"52573":83,"526":[82,84,85],"52671":81,"527":[76,82,85],"52709":82,"52713":82,"52725":82,"52753":82,"52758":82,"52795":81,"52798":83,"528":[74,76,82,85],"5281":82,"52838":82,"52856":81,"529":[73,84,85],"52904":82,"5294":82,"52944":82,"53":[78,79,81,82,83,84,85],"530":[82,85,87],"53019":82,"53036":82,"53095":82,"531":[82,85],"53118":82,"5312":85,"53138":82,"532":85,"53203":83,"53209":82,"53239":82,"53272":82,"533":[74,85],"53322":81,"53346":82,"53374":82,"534":[73,76,81,82,85],"53413":82,"5343":85,"53448":82,"53474":82,"535":[75,82,85],"53503":82,"53523":82,"53535":82,"53545":82,"53576":82,"53596470096178":3,"536":[82,85],"5362":81,"53629":82,"5364":85,"53659":82,"53669":81,"537":[73,82,85],"53728":82,"53738":81,"53754":82,"5379":[],"538":[73,85],"53843":82,"53877":40,"539":[82,84,85,95],"53914":82,"53916":81,"53938":81,"54":[73,74,81,82,83,84,85],"540":[74,79,82,85,95],"54075":82,"541":85,"54143":83,"5416":81,"542":[82,85],"54276":82,"54278":83,"543":[2,82,85],"54356":85,"54367":40,"544":[73,85],"54461":40,"54465":83,"5448":81,"545":[85,95],"5450":81,"54531":83,"546":85,"5469":85,"547":[82,85],"5470":81,"54736":83,"5477":82,"548":[82,85],"54845":40,"5485":81,"549":[76,81,85],"5491":83,"54944":81,"54992":81,"55":[2,73,74,78,81,82,83,84,85,87],"550":[73,82,85],"5500":38,"55006":83,"55025":83,"551":[82,85],"5513":85,"55131":[85,86],"5519":85,"552":85,"5520":85,"55212":81,"55289":81,"553":85,"55331":83,"55378":83,"554":[73,85],"55413":81,"555":85,"55579":82,"556":[73,82,85],"5563":81,"557":[2,81,82,85],"5578":85,"558":[82,85,95],"5583":85,"5585":85,"5588":85,"55891":83,"559":[82,85],"5591":85,"5595":84,"56":[73,75,77,78,81,82,83,85],"560":[73,82,84,85],"5604":85,"5605":82,"56097":82,"561":[84,85],"56107":82,"56122":81,"56197":[85,86],"562":[74,82,83,85],"56215":49,"5626":85,"562e":81,"563":[85,95],"564":[78,82,85],"5646":82,"5649":83,"565":[81,85],"56529":83,"5659":81,"566":[82,83,85],"56625":81,"567":[82,85],"56722":78,"56749":83,"5679":81,"568":[82,85],"5685":81,"569":[73,82,84,85],"5690":81,"56917":81,"57":[11,73,74,78,79,81,82,83,84,85],"570":85,"57026":81,"57076":81,"571":[73,85],"5715":82,"57195":81,"572":[73,85],"5721":82,"57234":81,"573":[82,85],"57376":83,"574":85,"575":85,"5751":82,"576":[81,85],"577":[73,82,85],"578":[82,85],"57819":81,"5782":83,"5789":87,"579":[81,84,85],"57959":82,"57962":82,"57968":82,"57974":82,"57982":82,"57989":82,"57995":82,"58":[73,81,82,83,84,85,87],"580":[82,85],"5801":[83,84],"58011":82,"58017":82,"58041":83,"58063":82,"58083":82,"581":[85,86],"582":[82,85],"58217":82,"58238":[82,83],"583":85,"58327e":82,"584":[73,85],"585":85,"58521":83,"586":[82,85],"5869":81,"587":[82,85],"5875":[54,81],"588":[76,82,84,85],"589":[84,85],"59":[74,81,82,84,85,87],"590":[82,85],"59074":83,"591":[82,85],"59145":83,"59184":82,"5919306617286774e":3,"592":[81,82,85],"5925":35,"593":[73,85],"59331":[81,82],"594":[82,85],"595":85,"596":85,"597":[82,85],"59713":83,"5975":85,"598":[73,85],"599":[76,82,85],"5991":81,"5992":81,"5994":85,"5e":[38,87],"5e5":63,"5i3l":77,"5rel":82,"5th":77,"6":[1,2,3,15,18,38,40,44,45,47,51,53,59,60,63,68,69,72,73,74,76,78,79,81,82,83,84,85,86,87,95,96,99],"60":[1,40,63,73,75,78,79,82,84,85,96],"600":[53,82,85],"600614003857873":3,"6009":85,"601":[78,85,95],"60111":82,"6013":74,"6014":82,"602":[73,76,78,85],"603":85,"60375":83,"604":85,"605":[73,82,85],"606":85,"6069":83,"607":[73,78,82,85],"608":[73,85],"60805":81,"609":[81,82,85],"60951":83,"60967":81,"61":[73,74,81,82,84,85],"610":85,"611":[81,85],"6115":83,"612":[73,85],"6121":85,"613":85,"614":85,"615":[82,85],"616":[76,83,85],"617":[85,95],"61707":81,"6172":[81,82],"61762":82,"6178":81,"618":[82,85],"6180":84,"6182":84,"6185":84,"6186":84,"61876":82,"619":[76,85],"6192":82,"62":[73,78,82,85,95],"620":85,"621":85,"62128":83,"622":[73,76,81,85],"62205":82,"622571":74,"6227":84,"6228":84,"6229":82,"623":[82,84,85],"624":[81,85],"6249":82,"625":[76,85],"6254":87,"626":[76,85,95],"62669":78,"627":85,"627963":74,"628":[73,82,85],"629":[73,82,85,95],"62916":83,"63":[73,74,81,82,84,85],"630":[82,85],"63002":83,"631":[73,74,76,84,85],"6314":0,"6317":82,"632":85,"6321":81,"6328":81,"633":[74,85],"634":[81,85],"635":[73,82,85],"636":[73,85,95],"637":[73,74,76,82,83,85],"6375":81,"6379":82,"638":[85,95],"63827":83,"639":[76,85],"64":[73,74,75,78,81,82,85,96],"640":[82,85],"6408":83,"641":[82,83,85],"642":[73,85],"6425":85,"64259":83,"643":[74,85,86],"6433":81,"6435":95,"644":[82,85],"64495":83,"645":85,"6455":82,"646":85,"6461":81,"64632":83,"64633":83,"647":[73,85],"6476":81,"648":[73,85],"648603":[73,95],"6487":85,"64887":83,"649":85,"64934":82,"6495":74,"65":[73,78,81,82,84,85,87],"650":[73,83,85],"651":[84,85],"652":[83,85],"65283":81,"653":85,"654":[81,85],"655":85,"6552":78,"656":[81,85],"6562":82,"6569":87,"65693038892429":3,"657":[74,85],"657129890916668":3,"65721":83,"65796":81,"658":[81,82,84,85],"6589":81,"659":[84,85],"6591":81,"659883":85,"66":[78,81,82,84,85,86,95],"660":[82,85],"661":[82,85],"662":[82,85],"663":[73,85],"664":85,"6643":82,"665":85,"6651":83,"666":[73,76,85],"667":[82,85],"668":[82,85],"669":85,"669628":85,"67":[40,73,78,82,84,85],"670":[73,85],"6707":[],"671":85,"6714":84,"67141":74,"672":[73,82,85],"6720":82,"67233":81,"673":[73,82,85],"6737":82,"674":[76,85],"6749":87,"675":[81,82,85],"67537":81,"676":[76,85],"67612":81,"677":85,"678":85,"678373":77,"678570":78,"678646":78,"67878":85,"678848":77,"67885":81,"678914":77,"679":[73,85],"679306":78,"679516":78,"679612":78,"68":[40,49,73,75,78,82,84,85],"680":[81,82,85],"6804":81,"6806":81,"681":85,"68191":83,"68198":83,"682":[78,85],"683":85,"684":[82,85],"6842":85,"685":[82,85],"686":85,"687":85,"6874":84,"6875":84,"6878":81,"688":[81,82,85],"6880":81,"6885":78,"689":85,"69":[73,81,82,84,85,86,95],"690":85,"69007":83,"6902":81,"691":[82,85],"6911":85,"69191":81,"692":85,"693":[83,85],"6936":82,"694":[82,85],"695":[82,85],"6958":85,"696":[73,85],"6965":81,"6969":81,"697":[81,82,85],"69743":81,"6978":82,"698":[82,85],"6983":87,"699":[73,76,85],"7":[2,3,37,40,45,46,47,48,50,51,64,73,74,76,78,79,81,82,83,84,85,86,87,95,96],"70":[73,74,76,82,84,85,95],"700":[1,64,79,82,85],"7000":11,"70048":83,"701":[81,85],"702":85,"70272":83,"703":[82,85,86],"704":[82,85,86],"70452":81,"70469":82,"705":[76,79,82,85],"70538":85,"7057":83,"706":[73,82,85],"7062494437063":3,"706694":85,"707":85,"7070":74,"7072":81,"7075":81,"70752":81,"708":[73,82,85],"70801":79,"7085":83,"709":[82,84,85],"71":[73,74,79,81,82,83,84,85,95],"710":[73,82,85],"711":[82,85],"712":[82,85],"713":[82,85],"71331":83,"714":[73,85],"7142":83,"715":[73,85],"716":[82,85],"717":[82,85],"71785":81,"718":[73,85],"719":[73,85],"72":[18,69,73,74,79,81,82,83,85,86,95],"720":[82,85],"721":[82,85],"72162":81,"722":[73,82,85],"723":85,"7235":81,"724":76,"7241":81,"72428":81,"72438":83,"725":84,"726":[82,85],"7267":81,"72705":81,"728":[76,82],"7289":81,"729":81,"7293":81,"73":[40,73,74,81,82,83,85],"730":85,"731":[82,85],"732":82,"73284":81,"733":[82,85,86],"734":82,"735":[73,85],"736":[73,77,82,85],"737":82,"73719":83,"738":82,"738e":82,"739":[73,77],"74":[74,75,78,79,81,82,85,89,95],"740":84,"74028":85,"741":[73,82],"7410":84,"742":83,"7429":87,"744":73,"745":[81,82],"74578":83,"746":[73,74,78],"747":85,"7479":85,"748":[82,85],"749":[76,82],"7490":78,"75":[12,45,54,73,78,79,81,82,84,85,95],"751":[73,82],"752":[72,73,95],"7521":81,"75458":83,"755":[73,82],"75607":40,"7571":82,"758":[76,81,82],"759":82,"7599":81,"76":[11,73,74,78,79,81,82,84,85,95],"760":[73,82,84],"7603":74,"76079":40,"7608":81,"761":[73,82],"76136":83,"7620":82,"763":[73,82,84],"7630":84,"7632":84,"7644":81,"76468":40,"7648":85,"7675":82,"769":[72,73,95],"77":[73,74,75,78,79,81,82,84,85,86],"770":76,"771":[81,82],"772524827250213e":3,"773":[74,76],"7747":81,"7749":81,"775":[73,82,84],"776":82,"777":[73,82],"77775":83,"778":81,"778243":74,"779":85,"77983":40,"78":[73,74,76,77,79,81,82,83,84,85,95],"7811":82,"7812":84,"7813":84,"782":82,"782563":74,"78346":79,"7837":82,"7844":82,"785":82,"7854":82,"786":[81,85],"7863":82,"787":74,"7872":82,"788":82,"78839":83,"79":[1,40,53,73,76,79,81,82,83,84,85],"790":[73,85],"79025":73,"791":73,"79118":83,"7919":81,"792":[82,84],"793":76,"794":[73,82,84],"79466":85,"79474":85,"79484":85,"79495":85,"795":85,"79503":85,"79529":85,"79546":85,"796":73,"7962":85,"79677":85,"7972":82,"798":[73,82],"799":[73,85],"7beq":74,"7e":87,"8":[1,2,11,22,40,44,47,49,53,63,73,74,75,76,78,79,81,82,83,84,85,86,87,95],"80":[12,33,40,64,73,78,79,81,82,84,85,86],"800":[64,73,82],"8000":53,"80027":83,"80045":85,"801":76,"801406_1":73,"801574_1":73,"802":[73,81,82],"802003_1":73,"80208":81,"803":82,"804":82,"80437":83,"805":[73,82],"806":84,"8072":76,"808":[73,82,85],"81":[73,74,79,81,82,84,85,95],"8101":85,"810542_1":73,"811":[74,82,84],"812":[73,82],"8125":48,"8127":82,"813":82,"81377":83,"814":[74,82],"81495":81,"81513":85,"81589":83,"816":[73,82],"817":[73,82],"8170":82,"818":84,"81814":83,"8183":82,"8184":82,"819":82,"82":[18,40,69,73,78,79,81,82,84,85,95],"821":85,"82146":83,"823":76,"8234":85,"824":76,"8256":85,"826":82,"8264":83,"827":73,"8270":85,"828":82,"82846":81,"829":82,"82982":85,"8299":85,"83":[40,73,78,82,84,85],"830":74,"831":[73,76,81,82],"83106":83,"83108":85,"83162":85,"833":[75,82,84],"83305":85,"8339":83,"834":[81,85],"835":82,"8353":81,"8365":73,"83681":85,"838":82,"839":[77,83],"84":[73,74,81,82,84,85,86],"840":84,"8417":85,"842":[73,78],"8429":85,"843":[76,85],"8436":82,"844":82,"845":84,"846":82,"849":82,"84910":73,"8498":73,"85":[40,73,75,76,78,79,81,82,84,85,89,95,96],"8507":76,"851":[73,82],"853":82,"8531":73,"85351":81,"854":[76,82],"8541":85,"85421":82,"85448":81,"8559":83,"856":[73,82],"857":82,"8570":82,"85708":81,"8572":82,"858":82,"859":82,"86":[40,73,82,84,85],"860":82,"861":82,"86348":83,"864":[76,82],"865":73,"8650":76,"86526":81,"866":[73,76],"8668":82,"867":82,"868":82,"869":[73,82,85],"8694":82,"86945":83,"87":[73,76,78,81,82,83,84,85],"870":73,"8706":82,"871":83,"872":82,"873":[73,82],"874":82,"87496":83,"875":82,"876":73,"87615":18,"877":[82,95],"87799":82,"878":82,"879":[73,82],"88":[73,74,78,81,82,84,85],"8800":81,"8807":83,"881":[73,82,84,85],"8813":82,"883":85,"885":73,"886":[74,78,82,83,85],"8863":84,"887":[82,86],"8871":84,"8873":82,"888":[73,82],"889":[82,85],"89":[74,75,77,78,79,82,83,84,85,86],"890":[73,85],"891":[73,82],"892":76,"893":[82,84,85],"894":[82,95],"895":[82,84],"8951":82,"8952":81,"8957":82,"896":82,"89652":85,"897":[73,82],"8971":82,"898":[76,82],"8986":81,"899":82,"8996":82,"8997":82,"8m3":83,"9":[3,11,40,45,52,53,64,73,74,78,79,81,82,83,84,85,86,87,95],"90":[1,40,45,46,47,50,51,53,54,73,74,75,76,77,78,79,81,82,84,85,86,87,95,96],"900":[73,82],"9000":82,"901":[82,85],"9013":84,"9018":81,"902":82,"903":[81,82],"9039":82,"904":[82,84],"904199434387693e":3,"9045":[],"90458":83,"905":73,"9054":82,"906":[73,82,85],"9067":82,"907":[82,85],"90710":85,"908":[73,82,85],"90807":83,"90889":85,"909":[82,85,86],"91":[40,78,82,84,85],"910":73,"91089":85,"911":[73,82],"91153":85,"912":84,"91203":85,"91236":83,"9126":82,"9133":82,"91362":81,"914":[73,82,85],"915":73,"9155":76,"91555":85,"91579":83,"91595":85,"916":[38,82],"917":[38,73,82],"918":82,"91895":85,"919":[74,82,85],"91913":83,"9195":82,"92":[49,73,74,76,79,81,82,84,85,95],"920":[73,82],"92029":85,"92093":85,"921":[73,82],"9212":81,"9213":81,"92165":85,"92194":81,"922":[82,85],"92296":85,"923":82,"9239":85,"924":[82,83],"9244":84,"9245":84,"9247":85,"926":85,"92639":85,"9265":82,"92656":85,"927":[81,82,85],"928":82,"9281":74,"929":[82,85],"92940":85,"93":[76,78,81,82,84,85,87,95],"930":81,"9301":85,"93047":85,"93092":85,"931":[73,76,85],"93126":85,"93138":85,"932":[73,82],"93248":85,"933":82,"93302":85,"93340":85,"93360":85,"934":82,"93419":85,"935":[73,82],"9351":82,"9352":83,"93595":85,"936":[40,74,82],"937":[73,82,84,85],"93703":85,"93709":85,"93712":85,"93742":85,"93749":85,"93816":85,"93838":85,"9385":81,"9386":81,"93862":85,"93867":85,"93870":85,"93872":85,"93886":85,"93890":85,"939":[73,83,85],"93959":85,"93960":85,"93970":85,"94":[40,73,74,76,81,82,84,85,86,96],"940":82,"94017":85,"94031":85,"94057":85,"94063":85,"94065":85,"94077":85,"94089":85,"94097":85,"941":[40,73,82],"94101":85,"94103":85,"9416":82,"94166":85,"94172":82,"94173":85,"94187":83,"94188":85,"94194":85,"942":[73,76,82],"94215":85,"94275":85,"943":[73,82,84],"94373":85,"944":[40,82,83],"945":82,"946":[40,76,82],"947":[40,73,76,82,85],"948":[82,85],"94809":81,"949":82,"95":[1,37,40,45,54,63,69,73,76,81,82,84,85],"950":[74,82],"95027":81,"9504":81,"951":[73,75,82],"952":[75,82],"9522":81,"953":[40,73,74],"954":[73,78],"95408":85,"95409":85,"95410":85,"955":82,"956":[73,75,84,85],"9560":85,"95632":[85,86],"9567":81,"95698":85,"957":73,"958":82,"959":[81,82,84,85,95],"9593":81,"96":[40,73,76,78,81,82,84,85,87,96],"960":[73,75],"961":73,"9614":85,"962":[82,84],"963":82,"964":[73,85],"9645":81,"965":[73,82,85],"965028":85,"96574":85,"966":[73,82],"9672":85,"9673":85,"968":[73,95],"96848":83,"969":[82,84],"97":[40,73,74,76,78,79,81,82,84,85,86,89,95],"970":73,"97069":82,"97072":82,"97094":82,"971":[73,81,82,83],"9712":81,"9716":85,"97163":82,"972":82,"97204":83,"9721":95,"9722":85,"9725":85,"9727":82,"972795822746061":3,"9728":85,"973":[76,82,84],"97306":83,"9731":85,"974":[74,81,85],"97476":83,"97485":82,"975":[41,51,53,54,58,59,60,73,81,82],"9752":85,"976":[82,85],"97625":79,"9765":78,"977":[81,84],"9778":84,"978":[0,82,84,85],"9784":85,"979":[73,82,84],"9794":82,"97949":84,"9795":3,"97969":82,"98":[40,73,74,75,76,78,79,81,82,84,85,86],"980":[73,82,85],"98056":83,"981":[82,83,84],"9810":85,"9814":84,"982":[82,84,85],"983":[73,84],"9835":82,"98352":85,"9839":82,"984":[81,82],"98416":78,"98469":81,"985":[85,87],"9850":84,"98551":82,"986":[73,84],"987":[82,83,85],"9877":85,"988":[73,82,84,85],"989":[73,82],"9895":82,"9899":82,"99":[40,44,73,74,76,77,78,79,82,83,84,85,86,96],"990":73,"9907":82,"991":[73,82,85,87],"99117":82,"9914":78,"99142":82,"992":[73,76,82,84],"99286":82,"993":[73,74,76,84],"9931":82,"99349":82,"9938":85,"994":[73,76,82],"99428":82,"9943":79,"99436":82,"99441":82,"9949":85,"995":[73,76,82,84,85],"996":[73,76,78,82,83,85],"997":[76,82,84,85],"997300":[41,51,54,58],"998":[73,79,85,86],"9982":85,"99873":85,"9989":85,"99895":85,"999":[3,21,82,85,86],"99901":85,"99902":85,"99903":85,"99952334925477":3,"999803":75,"9999":44,"999913":85,"999939":85,"9999551354884303":3,"9999691721195861":3,"999993":82,"999994":82,"999997269169901":3,"999998":82,"999999":44,"9999999":44,"9m":76,"9m56":83,"A":[0,1,2,3,4,6,11,12,14,15,16,17,18,21,22,23,24,25,26,28,29,30,31,33,35,40,43,44,47,49,52,53,54,59,60,61,63,64,70,72,73,74,75,78,80,81,82,84,85,87,91,92,94,95,96,97],"AND":[33,91],"AS":[89,91,95],"AT":95,"As":[1,2,4,7,35,40,44,47,74,78,79,81,82,83,84,85,86,96,97],"At":[0,2,7,53,59,60,74,77,78,81,82,83,85,86,87,97],"BE":91,"BUT":91,"BY":91,"But":74,"By":[1,2,7,34,52,53,55,59,60,61,63,66,68,70,74,76,81,82,83,84,85,86,87],"FOR":91,"For":[1,2,7,9,11,14,15,38,41,42,44,47,48,51,52,53,54,55,58,59,60,72,73,74,75,76,78,79,81,82,83,84,85,87,89,90,93,96],"IF":91,"IN":91,"If":[1,4,7,9,11,14,15,16,18,22,24,33,34,35,38,40,43,44,46,47,48,50,52,53,54,59,60,63,64,66,68,69,70,72,73,74,76,77,78,79,81,82,83,84,85,86,87,96],"In":[0,1,2,4,7,11,14,15,21,23,40,47,52,53,54,59,60,61,73,74,76,77,78,81,82,83,84,85,86,87,92,93,97],"It":[2,3,11,14,35,37,40,41,50,53,54,59,60,63,71,72,73,74,76,77,78,81,82,83,84,85,86,87],"Its":[2,36],"NO":91,"NOT":[18,91],"Near":74,"No":[38,40,82,83,84,85,96],"Not":[38,45,51,52,53,59,60],"OF":91,"ON":91,"OR":91,"Of":2,"On":[2,49,74,75,77,83,86],"One":[1,38,74,75,76,78,83],"Or":[71,90],"SUCH":91,"Such":2,"THE":91,"TO":91,"That":[2,14,74,83],"The":[0,1,3,4,6,7,9,11,12,14,15,16,17,18,22,23,24,25,26,29,30,31,33,35,36,38,40,41,43,44,45,46,47,48,49,50,51,52,53,54,57,58,59,60,61,62,63,64,66,69,70,72,73,74,75,76,77,78,79,81,82,83,84,85,86,87,89,90,92,93,94,95,96,97,98],"Then":[9,14,53,59,60,75,76,82,85,86,90,96],"There":[1,2,7,9,74,75,76,77,78,81,82,83,85,86,89,97],"These":[1,2,3,4,14,15,33,38,48,53,60,63,72,74,75,76,78,80,82,83,85,86,96],"To":[0,1,2,4,7,11,14,47,49,72,74,75,77,78,82,83,84,85,86,89,90,92,96,97],"Will":1,"With":[14,35,73,74,75,76,81,83],"_":[2,22,35],"_0":35,"_1":[2,35],"_2":2,"_3":2,"__cxx11":[22,23,24,25,26],"__future__":[4,6],"__id__":3,"__init__":[4,6,10,11,12,14,15,16,17,18,22,23,24,25,26,30,31,33],"__main__":[6,83],"__name__":[6,83],"_compon":4,"_detector":26,"_do_outlier_reject":15,"_goniomet":4,"_goniometer_factori":4,"_i":[2,35],"_n":2,"_object":[10,12,14,22,23,24,25,26],"_outlier_indic":15,"_processor":12,"_processorrot":12,"_reindex":40,"_rmsds_core":14,"_src_path_root":4,"_\u03ba":2,"_\u03c6":2,"_\u03c9":2,"a1":[18,82,85],"a2":[7,18,96],"a222":77,"aaron":[0,93],"ab":[2,82,85],"abandon":79,"abbei":74,"abc":2,"abil":42,"abl":[40,82,85,86,87],"about":[2,4,7,14,15,23,25,47,48,57,62,64,74,76,78,81,82,83,84,85,86,98],"abov":[1,4,9,37,38,40,41,44,47,51,54,58,63,64,69,70,73,74,76,82,85,86,87,91],"abraham":[75,95],"abruptli":83,"absenc":[35,69,72,79,82,85,87],"absent":[18,40,68,72,82,84,85],"absolut":[1,18,30,44,53,59,60,72,83],"absolute_angle_toler":[11,18,40,53,69,72],"absolute_cutoff":[14,53,59,60],"absolute_import":4,"absolute_num_interv":[53,59,60,73,75],"absolute_toler":33,"absorb":63,"absorpt":[1,15,35,54,63,72,82,85,86,87],"absorption_correct":[1,54,63],"absorption_level":[1,63,72,87],"abspath":83,"abstract":[0,2,14,15],"ac":[2,90,95],"ac02":[0,89],"acad":95,"acceler":[11,53,93],"accept":[2,7,14,47,50,51,53,72,73,82,85,86],"access":[1,9,14,21,48,81,83,86,89],"accessor":14,"accord":[11,14,18,42,46,47,76],"accordingli":77,"account":[1,2,35,47,50,51,53,82,85,86,87],"accumul":[0,12,18],"accur":[14,47,50,51,73,78,83,87,95,97],"accuraci":[53,59,60],"achiev":[7,14,35,53,56,59,60,81,87],"acknowledg":89,"acronym":44,"across":[0,1,43,53,59,60,63,72,74,75,82,87,96],"act":[47,51,66],"acta":[0,2,11,18,40,69,72,75,79,89,95],"action":[53,59,60],"actual":[2,14,15,73,76,81,83,85],"ad":[33,44,59,70,73,74,76,81,82,85,94,95],"ada":94,"adam":[0,2,11,95],"adapt":[14,75,94],"adaptlbfg":[14,19],"adaptlstbx":[14,19],"add":[4,9,10,12,14,15,29,33,44,47,53,73,76,82,85,86,90,96],"add_batch_list":[32,33],"add_column":14,"add_constant_to_diagon":14,"add_cryst":33,"add_dataset":33,"add_empty_dataset":33,"add_experi":33,"add_group":23,"add_panel":23,"add_row":14,"addit":[0,1,7,14,15,26,33,41,43,44,46,47,49,53,54,59,60,63,75,81,82,85,86,87,94,96],"addition":[14,82,85,93],"additional_stat":63,"address":[0,78,93,97],"addsym":73,"adher":[82,85,86],"adjust":[1,64,73,74,75,82,85,86,87],"adob":71,"adopt":2,"advanc":[0,16,80,82,83,85,86,88,97],"advantag":[82,83,85,86],"adventur":97,"advic":[0,77],"advis":[1,91],"advisori":93,"adxv":[81,85],"ae":95,"af":[10,12,14,23,24,25,26],"affect":[1,42,53,59,60,72,74,75,78,82,83,85,86,93],"afonin":95,"after":[0,1,14,18,35,39,44,48,53,54,59,60,61,63,66,72,73,74,75,78,81,82,83,84,85,86,87,92,96],"ag":84,"again":[64,73,74,78,81,82,83,84,85,86,87,92],"against":[11,15,18,47,59,63,70,76,77,81,82,83,85,87,88],"aggreg":11,"agre":[1,2,76],"agreement":[53,82,85,86,87],"aguila":95,"ah":95,"ahead":[26,74,77,78,83],"ai":95,"aim":[1,76,87],"aimless":[1,44,75,82,85,86],"ak":74,"al":[11,64,72,79],"albula":81,"alcv":83,"algorithm":[0,1,2,4,31,32,38,40,41,42,47,50,51,53,54,58,59,60,63,71,74,78,81,82,83,84,85,86,89,94,95,96,98],"algoritm":93,"alguel":83,"alia":[11,12,15,33,63],"align":[2,11,21,23,25,34,75,76,77,78,87],"align_cryst":71,"all":[0,1,2,3,4,7,11,14,15,18,23,24,25,26,33,35,38,40,44,45,47,48,49,51,52,53,54,59,60,62,63,64,68,69,70,72,73,74,75,76,77,78,79,81,82,83,84,85,86,87,91,93,96],"all_lau":24,"all_rot":24,"all_same_typ":24,"all_sequ":24,"all_stil":24,"all_tof":24,"aller":[83,95],"alloc":[22,23,24,25,26,54],"allow":[1,3,11,14,16,18,23,24,34,38,44,46,48,52,53,59,60,61,63,73,74,75,76,77,81,82,83,85,86,87,89,92,93,94,96],"allow_multiple_sequ":[52,92],"allow_non":[35,37,38,40,41,42,43,44,45,46,47,49,50,51,52,53,54,55,56,58,59,60,62,63,64,65,66,67,68,69,70,72],"almost":[53,74,76,77,82,85],"along":[2,11,23,33,34,40,52,53,64,74,75,77,81],"alongisd":63,"alongsid":[1,73,92],"alonso":95,"alpha":[2,25,40,53,59,60,87],"alpha_i":35,"alreadi":[1,4,14,16,21,23,25,26,29,53,59,60,63,72,74,76,78,82,85,86,87],"also":[1,2,3,4,7,9,11,14,15,18,21,22,23,25,26,33,37,44,48,50,53,59,60,61,63,66,68,70,72,73,74,75,76,77,78,81,82,83,84,85,86,87,90,96],"alter":[45,74,76,86],"altern":[1,4,7,11,52,53,59,60,61,63,66,77,79,82],"although":[1,38,60,73,75,77,78,81,82,83,85,86,92],"altogeth":18,"altruism":0,"alun":[0,97],"alwai":[1,9,47,54,77,78,83,86],"am":95,"ambigu":[18,40,61,72,76,77,95],"ami":0,"ammaar":0,"amongst":[42,83],"amount":[35,41,51,54,58,63,73],"amplifi":14,"amplitud":[33,63,77,84],"amyloid":95,"an":[1,2,3,4,7,9,11,14,15,16,18,21,23,24,25,26,29,30,31,33,35,37,38,40,41,42,43,44,45,46,47,48,50,51,52,53,54,58,59,60,61,62,63,64,66,67,72,73,74,75,76,77,78,79,81,82,83,85,86,87,89,92,93,95,96,97],"analogi":2,"analys":[18,37,40,52,53,59,60,72,74,82,83,85,86,89,93],"analyse_output":81,"analysi":[14,18,37,40,49,53,56,59,60,63,69,72,77,78,80,81,84,86,87,89,93,95,96,97],"analysis_lev0":81,"analysis_lev1":81,"analytical_correct":63,"analyz":[48,93],"anastassi":97,"ancestor":4,"andi":95,"andrei":77,"andrew":[0,40,97,98],"ang":53,"angl":[2,6,11,18,21,23,25,33,39,40,52,53,54,60,63,68,69,70,72,73,74,76,82,85,86,87],"angle_toler":22,"angstrom":[1,11,41,47,50,51,53,54,58,72,77,78,81,82,83,85,86],"angular":[2,11,18,53,59,60,81,82,85],"ani":[3,7,11,14,15,18,24,33,38,40,44,47,49,52,53,59,60,61,63,66,72,74,76,77,79,81,82,83,84,85,86,87,89,91,92],"anisotrop":18,"annlib":33,"annlib_adaptbx":33,"annot":6,"annoy":83,"annual":93,"anom_amplitud":33,"anom_arrai":33,"anom_multipl":33,"anomal":[1,33,43,63,72,74,76,79,82,85,86,87],"anoth":[1,53,61,74,75,78,82,85,96],"ansitowin32":33,"anticip":[35,82,85],"anvil":35,"anvil_correct":71,"anyon":0,"anywai":[82,85,86],"ao":95,"ap":[73,74,77,78,79,82,84,85],"apach":71,"apache_install_di":48,"apart":[7,81,82,85,86],"api":[22,24,25,26,83],"app":79,"appar":[76,81,85,86],"apparatu":[2,4],"appear":[2,29,36,45,71,73,74,76,79,82,85,86],"append":[4,11,14,24,44],"appendix":18,"appl":[2,11,40,64,79,95],"appli":[0,1,3,4,11,14,15,18,21,24,44,46,52,53,54,59,60,61,63,72,73,75,76,78,82,83,85,86,87],"applic":[0,44,54,72,73,82,85,86,90],"apply_hkl_offset":11,"apply_mask":71,"apply_sigma_correct":18,"apply_symmetri":11,"appreci":11,"approach":[1,11,76,95],"appropri":[2,7,11,12,14,15,23,40,43,53,59,60,63,66,74,75,76,79,81,83,86,87],"approxim":[14,35,37,43,63,72,74,77,81],"apr":[48,95],"aquila":[74,95],"ar":[0,1,2,3,4,7,9,11,14,15,16,18,22,23,24,25,26,33,35,38,40,41,43,44,46,47,48,51,52,53,54,55,57,58,59,60,61,62,63,64,65,66,69,70,72,73,74,75,76,77,78,79,81,82,83,84,85,86,87,89,90,91,92,93,94,95,96,97],"arb":95,"arbitrari":31,"arbitrarili":2,"arc":[51,74],"architectur":95,"archiv":[7,75,78],"area":[1,47,74,85,86,97],"aren":40,"arg":[4,11,14,24,33],"arg1":[10,12,14,22,23,24,25,26],"arg2":[10,12,22,23,24,25,26],"arg3":[10,12,23,24,25,26],"arg4":[10,12,25,26],"arg5":[10,12,25],"arg6":[10,25],"arg7":25,"argpars":33,"argu":2,"argument":[7,14,15,26,31,33,50,52,53,64,66,93],"argumenthandlingerrorinfo":[32,33],"argumentpars":[6,32,33],"argumentparserbas":[32,33],"argv":83,"arima":95,"aris":91,"arm":25,"around":[1,18,34,47,50,51,53,59,60,74,76,78,83,86,97],"arrai":[1,4,11,14,15,18,32,33,42,54,55,63,72,89,95,97],"arrang":[2,81,93],"array_famili":[3,4,11,83],"arrayscalingmodel":15,"art":[74,86],"artefact":81,"articl":74,"as_dict":18,"as_fil":24,"as_imageset":26,"as_json":[18,24],"as_str":22,"ascii":[3,74,86],"ascrib":11,"ashton":[0,95,97],"asid":78,"ask":[48,76,83],"asmit":0,"aspect":[2,75,93],"assembl":93,"assembli":74,"assert":[6,52],"assert_is_compatible_unit_cel":22,"assess":[11,48,73,74,76,82,83,85,86,93,95,96],"assign":[11,22,53,72,77,82,83,85,86,87],"assign_indic":11,"assignindicesglob":11,"assignindicesloc":11,"assignindicesstrategi":11,"assist":[0,72,89],"associ":[4,11,14,15,53,59,60,68,83,92],"assum":[1,2,7,14,21,22,23,25,29,35,37,46,48,64,74,75,79,81,83,87],"assumpt":[1,23,35,76,78,83],"assur":53,"asu":[37,73],"asymmetr":[44,56,77,94],"asymptot":[82,85],"atom":[0,2,63,76],"attach":25,"attempt":[4,24,34,35,53,63,76,83,87,96],"attende":99,"attent":[74,76,86],"attenu":35,"attribut":[14,15,33],"attributes_level":7,"aug":95,"augment":36,"aureliu":95,"author":73,"auto":[1,11,18,40,44,45,47,49,51,52,53,54,59,60,62,63,64,69,72,82,83,85,86],"auto_reduct":[53,59,60],"autoindex":[53,79,82,85,86],"autom":[0,97],"automat":[1,9,11,18,33,40,48,53,59,60,66,72,74,75,79,82,83,84,85,86,87,95],"automatic_default_fre":79,"automatic_default_scaled_unmerg":79,"autotyp":18,"auxiliari":14,"avail":[0,1,4,9,14,21,26,35,47,54,63,74,75,77,78,79,81,82,83,84,85,86,87,90,93,94,96],"averag":[1,38,42,55,63,64,82,85,86],"average_detector":38,"average_hierarchy_level":38,"average_imag":64,"avoid":[0,14,33,53,59,60,72,74,81,82,83,85],"aw":95,"awai":[75,81],"awkward":74,"ax":[2,14,25,34,35,52,57,62,74,75,76,78],"axford":[11,83,95],"axi":[2,4,6,21,22,23,25,33,34,38,52,53,59,60,64,72,73,75,76,77,78,82,84,85,86],"axial":[69,87],"axis_and_angle_as_r3_rotation_matrix":6,"aydin":95,"a\u00b2":[82,85],"b":[1,2,14,15,18,21,22,40,53,59,60,61,63,72,73,74,76,77,78,79,81,82,84,85,86,87,95],"b_cart":[82,85],"b_factor":11,"b_iso":[11,53],"ba":95,"bacaj":95,"back":[1,54,63,73,74,76,81,83,86],"background":[3,19,31,32,41,47,51,54,74,78,82,84,85,86,95],"background_cutoff":64,"background_gradi":47,"background_s":[16,47],"backgroundgradientfilt":[16,19],"backstop":[50,81],"bacteri":95,"bad":[14,54,74,78,79,81,82,83,85,86,92],"bad_pixel_threshold":64,"bad_refer":54,"badli":[78,86],"balanc":48,"band":[53,74],"bandwidth":53,"bank":74,"bar":33,"barad":95,"barn":95,"base":[0,1,4,9,10,11,12,14,15,16,17,18,21,22,23,24,25,26,28,29,30,31,33,38,43,46,53,59,60,63,64,70,72,79,82,83,85,86,87,95,97],"base_package_opt":33,"bash":[7,74,75,76,83],"basi":[2,11,18,24,39,53,60,61,73,74,76,77,82,83,84,85,87],"basic":[1,2,7,14,76,82,85,86],"basic_imageset_from_dict":[27,30],"basic_imageset_to_dict":[27,30],"basic_str":[22,23,24,25,26],"basis_vector":11,"basis_vector_combin":53,"basis_vector_search":[4,19],"basis_vector_search_strategi":4,"basisvectorminimis":11,"basisvectorsearch":11,"basisvectortarget":11,"batch":[1,33,44,52,63,72,73,76,79,87,96],"batch_offset":[29,33,52],"batch_rang":43,"batch_siz":96,"batenburg":97,"batteri":0,"batyuk":95,"baxter":95,"bbox":[3,12],"bc":2,"beal":95,"beam":[0,1,2,3,4,6,11,22,23,24,26,27,32,33,34,35,37,38,41,47,51,52,53,54,57,58,59,60,64,68,74,75,76,77,81,82,83,85,86,92,94,95,97],"beam_centr":23,"beam_posit":64,"beam_position_method":64,"beam_prob":52,"beam_restraint":53,"beam_typ":52,"beambas":[10,24,26],"beamcomparison":[24,27],"beamfactori":[21,27],"beamlin":[2,4,35,44,48,78,81,82,84,85,86,89,93,95,97],"beamstop":73,"bean":95,"beaten":97,"becaus":[2,11,42,73,74,78,81,82,83,85,86],"becker":95,"becom":[1,2,14,63,76,78,83],"bedem":95,"been":[1,15,23,25,29,40,47,52,53,59,60,73,74,75,76,77,81,82,83,84,85,86,87,96],"befor":[2,7,23,35,37,38,41,53,54,59,60,63,64,68,73,74,75,76,77,81,82,83,84,85,86,87,90],"beforehand":74,"begin":[1,2,53,73,82,85,86],"behav":[42,82,85],"behaviour":[53,59,60,74],"behen":51,"bei":83,"beilsten":[0,95],"being":[3,6,12,14,18,25,42,53,55,59,60,63,73,74,76,78,81,82,83,85,86,87,92,93,94],"belong":[37,52,77,83],"below":[1,3,11,35,38,40,44,47,52,53,54,59,60,63,64,72,73,78,82,83,85,86,87],"benefici":[73,86],"benefit":[0,89,97],"benjamin":0,"benschoten":95,"bergmann":95,"berkelei":[0,89,91,93,99],"bernstein":[2,40,93,95],"best":[1,2,4,11,18,40,44,45,53,59,60,63,70,72,73,74,76,81,82,83,84,85,86,95],"best_model":11,"best_monoclinic_beta":[11,18,40,60,69,72,74,82],"best_subgroup":18,"best_unit_cel":[33,44,63],"beta":[2,18,40,60,69,72,82,85,86,87],"betalactamase_sum":85,"better":[0,48,64,73,74,76,82,83,85,86,92],"between":[0,1,2,3,11,14,15,18,21,35,37,39,40,41,44,45,47,51,52,53,54,58,59,60,61,63,64,72,73,74,75,76,77,78,81,82,83,85,86,87,92],"bewar":81,"beyond":[73,82,85,86,94],"bfg":[14,18],"bh":95,"bhowmick":[0,95],"bi":[82,85],"bia":[53,59,60],"bias":72,"bib":79,"bibliograph":2,"bibtex":79,"bideshi":95,"big":[74,82,85,86],"billi":0,"bin":[1,15,37,38,43,45,47,48,51,53,54,60,63,64,72,73,74,79,81,82,83,84,85,86],"bin_size_fract":[53,59,60,81],"bin_step":64,"bin_width":64,"binab":95,"binari":91,"bind":95,"binning_method":[43,72],"biol":[75,89,95],"biolog":95,"biologi":[0,89,97,98],"biomed":89,"biosci":[73,95],"biostruct":[95,97],"biotin":80,"biotin16":73,"biotin_p212121":73,"biotin_p222":73,"biran":95,"bit":[3,24,74,76],"bitmap":45,"bk":95,"bl":95,"bl32xu_group2_data":76,"blah_":92,"blame":76,"blank":75,"blaschk":95,"blend":80,"blind":76,"block":[14,24,53,54,59,60,63,66,76,81,82,83,85,86,92],"block_centr":14,"block_siz":[12,66,82,85],"block_size_unit":12,"block_width":[53,59,60,73,75],"blockcalcul":[14,19],"blockwis":1,"blue":[45,74,82,85,86],"blur":[47,51],"bm":95,"bn":[73,95],"bodi":[53,59,60,93],"bogacz":95,"bogan":95,"bold":72,"bolotovski":[0,11,95],"bool":[4,10,11,12,14,15,16,18,21,22,23,24,25,26,37,38,40,41,43,44,45,46,47,50,51,52,53,54,55,57,58,59,60,62,63,64,65,67,68,69,70,72],"boolean":[15,31,46],"boost":[0,22,23,24,25,26,35,73],"boost_python":12,"bootstrap":[9,83],"bootstrap_cryst":53,"border":[47,50,51,53],"boston":99,"both":[0,2,18,35,52,53,59,60,63,70,72,73,74,78,82,84,85,86,89,93],"botha":95,"bother":83,"bottom":[73,74,78,86],"bound":[3,11,12,18,47,50,51,53,54,66],"boundari":[82,85],"bourenkov":0,"bourn":7,"boutet":95,"box":[3,12,47,53,73,74,86],"bq":[73,95],"bracket":40,"bragg":78,"branch":86,"bravai":[40,60,74,78,84],"bravais_setting_":60,"bravais_setting_1":[60,82,85],"bravais_setting_2":[74,82,85],"bravais_setting_3":85,"bravais_setting_4":85,"bravais_setting_5":[75,77,84,85],"bravais_setting_n":[82,85],"bravais_summari":[82,85],"bravais_t":11,"breadth":23,"break":[74,92],"brehmer":95,"brewster":[0,89,93,95],"bricogn":[0,11,97],"bright":[45,51,73,82,85],"brilliant":97,"bring":[73,76,83,93],"brookhaven":2,"brookner":95,"brotat":72,"brought":97,"browser":[71,73,76,82,85],"bruhn":[73,95],"brunger":95,"br\u00e4uer":95,"buffer":[58,72],"buffer_s":58,"bug":89,"buijss":95,"build":[0,9,14,79,93],"build_dial":33,"build_up":14,"built":[4,93],"bullet":97,"buse":2,"busi":91,"butryn":95,"button":[78,82,85,86],"bypass":55,"bz2":[44,78,84],"c":[0,1,2,7,10,12,14,22,23,24,25,26,35,40,53,60,61,64,66,73,74,76,77,78,81,82,84,85,86,87,91,93,95],"c2":[18,40,60,69,72,74,82,85],"c222":85,"c2221":85,"c2sum_1":[85,86],"c2sum_1_":85,"c3h7no2":44,"c_grid":10,"ca":[95,99],"calc_2d_rmsd_and_displac":11,"calc_acentric_subgroup":11,"calc_exp_rmsd_t":14,"calc_n_param_from_bin":15,"calcul":[0,1,2,6,11,12,14,15,18,34,35,37,39,40,41,43,47,51,53,54,58,59,60,61,63,64,68,72,74,76,78,82,84,85,86,87,95],"calculate_esd":14,"calculate_gradi":14,"calculate_new_offset":15,"calculate_weight":14,"calculate_weighted_mean":33,"calero":95,"calibr":[51,66,73,74,75,81],"calibrate_pdb":51,"calibrate_silv":51,"calibrate_unit_cel":51,"call":[2,14,16,35,40,47,48,53,54,72,74,76,82,83,85,86,96],"callback":14,"callback_after_step":[14,18,82,85],"cambridg":[33,99],"came":74,"camera":73,"camp":0,"campaign":82,"campbel":11,"can":[1,2,3,4,7,9,11,14,16,21,23,24,33,35,37,38,40,42,44,45,47,48,50,51,52,53,54,55,59,60,61,63,64,68,69,72,73,74,75,76,77,78,79,81,82,83,84,85,86,87,90,92,93,96,97],"candid":[4,11,53,82,83,85,86],"candidate_basis_vector":4,"candidate_crystal_model":4,"candidate_orientation_matric":11,"candidate_outlier_reject":53,"candidate_spot":53,"cannot":[47,73,74,78,81,92],"canon":25,"capabl":[48,74,89],"caption":35,"captur":[82,83,85,86],"carbajo":95,"carbon":[0,35],"care":[76,81,82,83,85,86],"carefulli":[73,74,76],"careless":78,"carragh":[73,95],"carri":[40,82,83,85,86],"carrier":83,"cartesian":[2,11],"cascio":95,"case":[1,2,4,7,11,14,15,21,23,25,35,40,47,52,53,54,59,60,61,63,73,74,75,76,77,78,81,82,83,84,85,86,87,92,93,96,97],"cat":75,"catalyst":95,"cauchi":18,"caus":[14,15,74,77,78,82,85,86,91,92],"caution":14,"cautionari":78,"cb_op":[11,18,60,73,74,77,78,82,84,85],"cb_op_inp_min":18,"cbf":[3,4,21,23,25,33,45,47,48,49,51,52,55,65,75,79,81,82,83,84,85,87,92,93,96],"cbf_handl":[21,23,25,29],"cbf_handle_struct":21,"cbflib":33,"cc":[18,40,43,72,73,74,77,78,79,81,82,84,85,86,87],"cc1":[1,18,73,82,84,85],"cc_against":18,"cc_ano":[73,82,84,85],"cc_for":18,"cc_half":[43,72,79],"cc_half_fit":[43,72],"cc_half_method":[43,72],"cc_half_significance_level":[43,72],"cc_n_bin":60,"cc_pearson":[74,82,84,85],"cc_ref":[43,72],"cc_sig_fac":18,"cc_spearman":[74,82,84,85],"cc_true":18,"cc_weight":[18,40,72],"ccd":[23,42,78,82,85,86],"ccdc":73,"cchalf":[63,72],"cci":[9,48],"ccp4":[0,72,73,75,76,77,79,83,85,86,89,95,97,98],"ccp4_scr":79,"ccp4i2":86,"ccref":[43,72],"cctbx":[0,1,2,4,9,11,14,18,22,24,48,79,83,93,95],"cctbx_bundl":33,"cctbx_project":48,"cc\u00bd":[18,40,43,72,73,76,82,85],"cd":[7,9,33,48,73,74,76,79,81,83,90,95],"cdot":[2,35],"ce2":[1,96],"ceas":76,"cell":[2,11,14,18,22,33,35,40,41,44,45,46,47,50,51,53,54,57,58,59,60,63,64,69,70,72,73,74,75,77,78,79,81,82,83,84,85,86,95,96],"cent":95,"center":[18,40,60,64,69,72,77,82,85],"cento":48,"centr":[14,18,23,37,41,47,51,52,53,54,57,58,59,60,64,74,75,76,80,82,85,86,94,97],"central":[77,79,81],"centre_xi":75,"centroid":[3,4,11,31,41,44,47,50,51,53,54,58,59,60,66,70,78,81,82,83,84,85,86],"centroid_":3,"centroid_definit":[41,51,54,58],"centroid_diff_i":[62,81],"centroid_diff_max":62,"centroid_diff_x":[62,81],"centroidanalysi":14,"certain":[11,35,38,53,54,59,60,63,72,73,87],"certainli":53,"ceta":73,"cgi":48,"ch":[44,74],"chain":[4,77],"challeng":[73,74,77,78,86,95,97],"chanc":[76,82,85,86,96],"chang":[1,2,9,18,24,33,39,41,51,53,54,58,60,61,63,66,72,73,74,75,76,77,81,82,84,85,86,93,95,96,97],"change_basi":24,"change_of_basis_op":[11,18,24,61,69,74,77,82,85],"change_of_basis_op_to_best_cel":[18,19],"channel":95,"chapui":2,"char":[22,23,24,25,26],"char_trait":[22,23,24,25,26],"charact":[12,51,52],"characteris":81,"characterist":95,"characteristic_grid":[11,53],"charg":93,"chatterje":95,"chdir":83,"cheah":95,"cheat":74,"check":[1,4,7,9,16,18,24,26,33,37,38,53,63,69,74,76,79,81,82,83,85,92],"check_consistent_index":63,"check_doubled_cel":[11,53],"check_flag":16,"check_format":[6,24,26,30,33,83],"check_head":26,"check_indexing_symmetri":[71,78],"check_misindex":53,"check_reference_geometri":52,"checkbox":[74,86],"checkout":9,"checkpoint":[53,59,60],"chem":95,"chemic":[44,95],"chen":95,"cheng":[73,95],"chernev":95,"chi":[53,59,60],"chiang":[73,95],"chiral":[73,74,82,85,87,95],"chmod":74,"chno":[73,87],"choi":95,"choic":[1,2,15,18,34,38,39,40,41,43,44,45,47,51,52,53,54,57,58,59,60,62,63,68,69,72,73,76,77,82,85,86,87],"choleski":14,"chollet":95,"choos":[2,18,38,44,53,59,60,63,72,73,74,77,81,82,85,86,88],"choose_best_orientation_matrix":11,"chose":[75,81,86],"chosen":[1,2,4,11,14,15,18,35,38,43,53,57,59,60,62,63,74,76,77,82,84,85,86],"choudhuri":83,"christian":0,"chunksiz":[47,82,85],"cif":[2,40,44,61,63,70,72,76],"cif_fil":[21,23,25,29],"cif_pet":44,"circ":2,"circl":[2,47,50,51,73,76,82,85],"circular_grid":[41,51,54,58],"circumst":[29,53,59,60,92],"circumv":78,"citat":79,"cite":72,"cj":95,"cl":4,"clabber":[74,75,95],"claim":[4,74],"clarif":7,"clark":[0,89,95],"clash":33,"class":[2,6,10,11,12,14,15,16,17,18,21,22,23,24,25,26,28,29,30,31,33,41,45,47,51,52,54,55,58,73,74,75,82,83,84,85],"classifi":[15,47],"classmethod":[4,14,15,22,31,33],"clean":[53,74,81],"cleanup":33,"clear":[2,24,40,77,78,81,83,86,87,92,97],"clear_cach":26,"clearli":[2,74,78,81,82,83,85,86],"clibd":79,"click":[71,73,74,77,78,79,80,81,83,84,85,86,87,90],"client":71,"client_serv":48,"clock":95,"close":[1,14,24,53,59,60,66,73,74,75,77,81,82,83,85,86],"close_to_spindle_cutoff":[14,53,59,60,81],"closer":[48,74,81,83],"closest":[48,82],"cloud":86,"clumsi":29,"cluster":[16,18,38,40,47,48,54,72,82,83,85,93,96],"cluster_1":[40,96],"cluster_2":96,"cluster_20":76,"cluster_analysi":53,"cluster_id":[40,96],"cm":95,"cmd":83,"co":[2,35,72,76,95],"coars":[53,64],"code":[0,2,4,6,9,51,74,83,91,93,95,96],"codebas":93,"coeffici":[18,35,37,40,60,72,78,81,82,85,86],"cohen":95,"coincid":[2,25],"col":6,"col_select":[14,59,70],"colin":85,"collabor":[0,89,97,98],"collabra":18,"collat":35,"collect":[0,11,15,49,66,74,76,77,78,81,82,83,84,85,86,87,89,93,95,96,97],"colleti":95,"collinear":11,"color_cutoff":64,"color_schem":51,"colorama":33,"colorbar":64,"colour":[32,33,45,62,68,82,85,86],"colour_map":68,"colour_schem":45,"colspot":30,"column":[1,3,6,14,33,53,54,59,60,63,70,77,78,84],"com":[9,41,48,51,54,58,73,75,79],"comb":38,"combin":[1,2,11,15,18,38,40,44,46,47,50,51,53,54,59,60,63,70,72,73,74,75,76,78,81,82,83,84,85,87,92],"combine0":76,"combine_crystal_model":[70,72],"combine_experi":[71,81,83,92],"combine_parti":[33,44],"combine_scan":53,"combined_scor":11,"come":[76,83],"comfort":[83,86],"comma":64,"command":[1,4,7,9,32,33,48,52,63,71,73,74,75,76,79,80,81,82,83,84,85,86,87,90,93,96],"command_lin":[33,83],"committe":99,"common":[2,18,29,40,63,72,73,78,82,85,88],"commonli":[1,14,74,76,77,86],"commun":[2,74,95],"comp":[73,82,84,85],"compact":[2,11,18,24,44,52,81],"companion":[82,85,86],"compar":[15,37,38,44,63,72,73,74,75,76,77,78,81,82,83,85,86,96],"compare_beam":[24,33],"compare_detector":[24,33],"compare_goniomet":[24,33],"compare_model":[38,83],"compare_orientation_matric":[11,71],"comparison":[2,11,24,37,38,39,53,63,81,83],"compat":[38,74,78],"compens":[75,85],"compil":[9,48,90],"complet":[0,7,14,21,43,48,53,56,59,60,63,72,73,74,76,77,78,79,81,82,83,84,85,86,87,92,93,97],"complete_set":26,"complex":[4,7,21,23,38,82,86],"compli":44,"compliant":75,"complic":83,"compon":[0,1,2,4,15,25,40,47,56,63,76,82,83,85,86],"compos":[4,14,15,25,53,59,60,87],"compose_model_p":[53,59,60],"composit":[2,44,87],"compound":0,"comprehens":97,"compress":[7,44,45,78],"compress_level":45,"compris":83,"compromis":1,"comput":[1,2,11,18,31,39,41,44,47,51,54,58,64,67,72,76,79,82,93,94,95,96],"computation":[1,86,97],"compute_background":31,"compute_centroid":31,"compute_delta_cchalf":76,"compute_funct":[11,18],"compute_functional_and_gradi":[11,14,18],"compute_functional_gradients_and_curvatur":[14,18],"compute_functional_gradients_diag":[14,18],"compute_functional_score_for_dimension_assess":18,"compute_gradi":18,"compute_gradients_fd":18,"compute_mean_background":[16,47],"compute_residu":14,"compute_residuals_and_gradi":14,"compute_restraints_functional_gradients_and_curvatur":14,"compute_restraints_residuals_and_gradi":14,"compute_threshold":31,"concaten":14,"concentr":[53,59,60],"concern":[2,78],"conclud":[40,77,81,82,84,85,86],"concomit":97,"concret":14,"concurr":[14,63],"cond":14,"conda3":90,"conda_bas":9,"condit":[14,53,59,60,69,74,91],"conduct":[93,95],"conf":48,"confid":[18,37,40,73,74,76,82,84,85,86],"config":[47,83],"config_opt":33,"config_refineri":14,"config_restraint":14,"config_spars":14,"config_target":14,"configdict":[4,15],"configur":[4,9,14,15,21,23,33,48,53,59,60,63,70,79,81,82,83,85,87],"configuration_paramet":4,"configure_compon":[4,15],"configure_filt":16,"configure_modul":33,"configure_threshold":16,"conform":95,"confus":2,"conjunct":[47,54],"connect":[47,56,62],"connected":[1,63,72],"consecut":[4,15,52,55,63],"consecutive_refinement_ord":[4,15],"consequenti":91,"conserv":11,"consid":[37,41,47,50,51,53,54,58,64,74,76,77,82,85,87],"consider":[47,77,82,85,86],"consist":[1,2,11,14,18,40,53,60,61,63,72,74,76,77,78,82,83,84,85,86,87,97],"const_ref":[10,12,25,26],"constant":[2,14,53,54,59,60,75,87],"constant2d":54,"constant3d":54,"constantweightingstrategi":[14,19],"constrain":[1,11,53,59,60,63,82,85,86],"constraint":[1,11,14,53,59,60,70,74,82,83,84,85,86,87],"constraints_manag":14,"construct":[4,11,14,16,21,23,25,29,30,74,75],"constructor":[21,33],"consult":53,"consum":[73,83],"contact":79,"contain":[1,3,4,9,11,14,15,16,18,24,34,38,40,44,46,47,52,53,54,59,60,61,62,63,70,72,73,74,75,76,78,81,82,83,84,85,86,96,98],"content":[30,33,44,73,74,82,83,84,85,86],"context":[2,94],"contigu":[47,92],"continu":[0,53,59,60,73,74,77,78,82,83,84,85,86,92,93],"contract":[0,89,91],"contradict":35,"contrari":77,"contrast":[74,86],"contribut":[0,18,53,59,60,76,83],"contributor":[0,91],"control":[0,14,38,43,44,53,54,59,60,70,74,86,88,95,97],"conveni":[1,2,47,54,63,69,72],"convent":[8,22,52,53,61,64,66,77,82,87],"convention":2,"converg":[14,41,51,54,58,63,81],"convergence_as_shift_over_esd":14,"convers":95,"convert":[2,12,14,16,21,22,23,24,25,26,28,29,30,52,53,70,73,87],"convert_reflections_z_to_deg":11,"convert_sequences_to_stil":52,"convert_stills_to_sequ":52,"convert_to_cambridg":[32,33],"convinc":78,"convolut":[47,51,64],"convolution_width":64,"cooper":11,"coord":18,"coordin":[18,22,23,25,47,50,51,52,72],"cope":[6,97],"copi":[0,14,24,26,50,74,75,77,81,83,92],"copyright":91,"coquel":95,"core":[0,81,83,87,95,96],"core_paramet":11,"corner":[47,50,51,81,82,85,86],"correct":[1,2,3,4,15,18,23,30,35,44,47,50,51,52,54,63,65,72,74,75,76,77,80,82,83,85,86,87],"corrected_integr":81,"corrected_refin":81,"corrected_sv_refin":81,"correctli":[4,7,37,40,74,87],"correl":[3,14,18,37,40,53,59,60,61,70,72,74,76,78,79,81,82,83,85,86,87],"correlation_plot":[59,70,83],"correlationcoefficientaccumul":[18,19],"correspond":[4,6,11,14,33,36,53,54,73,74,77,78,82,83,85,86],"corrplot":[70,83],"corrplot_x":83,"cos_angl":72,"cosin":44,"cost":85,"cosym":[19,32,63,71,72,73,76],"cosymanalysi":[18,19],"could":[14,29,53,59,60,73,74,76,77,78,81,82,83,84,85,86,87,92],"count":[18,40,66,72,74,76,78,82,84,85,86,97],"counting_sort":[43,72],"coupl":[1,83],"cours":[2,82,86,87],"cov":80,"covari":[53,59,60,86],"cover":[1,47,54,76,82,85,86],"coverag":[1,81],"cpu":[81,83,97],"cpv17":95,"crawshaw":95,"creat":[1,4,7,9,14,15,16,22,23,24,26,28,38,48,50,53,54,59,60,63,70,74,75,76,82,83,85,86,87,96],"create_profile_model":[54,71],"cred":[47,54,63,66,69,72],"criteria":[14,43,46,76,82,85],"criterion":[14,53,59,60,63,82,85,86],"critic":[76,81,93,95,97],"croll":74,"cross":[63,74,75,82,85],"cross_valid":63,"cross_validation_mod":63,"crossov":[1,81],"crucial":36,"cryo":95,"cryst":[0,11,18,40,64,69,72,77,79],"crystal":[0,1,2,3,4,6,11,15,18,24,27,30,32,33,34,38,40,44,47,48,52,53,54,57,59,60,62,63,65,66,68,69,70,72,73,74,75,77,78,79,80,81,82,84,85,86,87,92,93,95,96],"crystal_a":11,"crystal_b":11,"crystal_id":[60,84],"crystal_model":[11,22],"crystal_nam":[33,44,63],"crystalbas":[22,24],"crystalfactori":[22,27],"crystallin":95,"crystallis":83,"crystallogr":[2,75,89,95],"crystallograph":[0,1,2,70,72,76,77,82,93,95],"crystallographi":[0,1,2,11,73,74,89,94,96,97,99],"crystfel":97,"cs03r":79,"csh":[7,48],"ctruncat":[77,85],"cubic":35,"cuda":[11,53],"culprit":78,"cumbersom":76,"curl":[9,48,75,90],"current":[2,4,7,14,18,24,33,44,53,55,59,60,63,69,75,77,78,81,83,86,90,92,93,94,96,97],"current_image_0":15,"cursor":86,"curtail":11,"curv":[18,43,53,74,78,81],"curvatur":[14,18,40,72],"curvatures_fd":18,"cusp":34,"custom":[4,63],"cut":[1,44,53,59,60,63,74,97],"cut_data":63,"cutoff":[1,11,18,38,40,43,44,53,54,59,60,63,72,73,76,82,85,86],"cutoff_criterion":53,"cyan":86,"cycl":[15,41,51,53,54,58,59,63,64,72,78,81,82,85,86],"cyst_0":87,"d":[0,1,2,4,11,18,22,23,25,29,30,31,40,44,46,47,50,51,53,58,63,73,74,75,78,79,81,82,83,85,89,95,97],"d62":[18,69],"d66":0,"d67":[18,69,79],"d70":11,"d74":[18,40,79],"d78":72,"d_":81,"d_ep":72,"d_max":[37,41,46,47,50,51,54,56,63,72,73,74,75,82,83,84,85,86],"d_min":[1,11,18,33,37,38,40,41,44,46,47,48,49,50,51,53,54,56,58,63,64,69,72,73,74,75,76,82,83,84,85,86,87],"d_min_fin":53,"d_min_method_1":49,"d_min_method_2":49,"d_min_start":53,"d_min_step":[53,82,85],"d_rang":[1,63,72],"d_space":[45,46,47,50,51],"d_star_toler":53,"da":95,"dai":98,"dallakyan":[73,95],"dalton":[0,95],"damag":[1,72,73,74,78,81,82,85,86,91],"damerel":95,"damping_valu":14,"daniel":[0,93],"danni":83,"dano":33,"daresburi":0,"darmanin":74,"dasgupta":95,"dat":83,"data":[0,4,5,7,8,11,12,14,15,16,18,24,26,33,35,40,41,43,44,47,48,49,52,53,54,55,59,60,61,62,63,66,69,70,72,77,78,79,80,81,83,84,88,89,91,92,93,94,95,97,98],"data_par":75,"datablock":[24,75],"datafil":[1,79,82,83,84,85],"dataset":[15,18,33,40,44,47,53,54,59,60,61,63,64,69,72,74,76,77,78,81,82,84,85,86,88,93,97],"dataset_id":33,"dataset_select":63,"datastructur":15,"datatyp":14,"date":[14,81],"datum":[2,35],"dave":[81,97],"david":[0,93,97,98],"dbscan":53,"dc":95,"de":[0,89,95],"dead":[46,81],"dead_pixel_range_i":64,"dead_pixel_range_x":64,"dead_tim":46,"deal":[2,75,81,86],"dealt":78,"debug":[14,44,53,54,57,59,81,82,85,86],"debug_centroid_analysi":[53,59,60],"dec":95,"decad":0,"decai":[1,15,63,73,82,85,87],"decay_correct":[1,63,86],"decay_interv":[1,63],"decay_restraint":[1,63],"decay_term":1,"decid":[4,76],"decim":[44,53,59,60],"decis":2,"declar":75,"decod":24,"decompos":[2,57,62],"decomposit":[57,62],"decompress":14,"deconvolut":[41,51,54,58],"decreas":[72,73,74,81,82,83,84,85,86],"dectri":[48,81],"deem":44,"deep":81,"def":[4,6,83],"default":[1,7,11,14,15,18,24,31,33,34,35,43,44,45,48,52,53,55,59,60,61,63,64,66,68,70,72,74,75,78,79,81,82,84,85,86,87,93,96],"defin":[2,14,15,18,43,46,47,50,51,53,54,63,73,74,75,87],"define_entry_point":4,"definit":[2,14,15,21,33,74,75,78,83],"defpix":30,"deg":[6,14,21,22,23,25,29,40,81,82,83,84,85,86,96],"degeneraci":74,"degrado":95,"degre":[1,2,11,15,23,25,35,40,41,51,53,54,58,59,60,63,66,68,72,74,77,81,82,83,84,85,86,87],"del_last_row":14,"deleg":[4,14],"delet":[14,38,54],"delete_integration_shoebox":63,"delete_shoebox":[38,54],"deliv":89,"deliver":[93,95],"delpsi":14,"delpsi_const":[14,53,59,60],"delpsic":14,"delta":[11,14,18,40,41,51,53,54,58,63,72,73,78,82,84,85,86,96],"delta_cc_half":76,"deltacchalf":[63,72,74],"deltapsi":14,"demand":86,"demonstr":[6,76,77,86,97],"den":95,"dendrogram":[38,40,72,83],"denomin":18,"dens":14,"densiti":[11,18,35,53,72,77],"depart":[0,89,94],"depend":[1,2,14,18,35,40,44,48,59,62,63,72,76,81,82,85,86,87,93,95],"depict":83,"depont":95,"deposit":73,"deprec":63,"depth":[1,4,23],"derefer":26,"derek":0,"deriv":[2,4,6,14,22,86,87,91],"describ":[2,3,7,18,48,53,59,60,74,75,77,82,83,84,85,86,87,95],"descript":[2,3,4,7,21,23,47,53,63,74,82,83,85,86,96],"design":[0,2,11,23,25,53,94,95,97],"desir":[2,9,41,63,72,82,84,85,87],"desktop":[81,83],"despit":[74,78,81,85,86],"dest_dir_prefix":33,"detail":[0,1,3,4,7,14,48,63,64,71,72,74,76,77,78,80,81,82,84,87],"detect":[14,53,59,60,73,78,82,83,85,87,97],"detector":[0,1,2,3,4,6,10,11,14,21,24,26,27,30,32,38,41,42,45,46,47,48,50,51,52,53,54,55,58,59,60,63,73,75,76,78,80,82,83,85,86,87,89,92,95,97],"detector1":[53,59,60],"detector_gain":54,"detector_spac":[41,51,54,58],"detectorbas":26,"detectorcomparison":[24,27],"detectorfactori":[23,27],"detectornod":23,"determin":[1,2,3,4,11,14,15,18,22,38,40,44,47,51,52,53,54,57,59,60,61,62,63,69,72,75,76,78,82,83,85,86,95],"determine_auto_absorption_param":15,"determine_esq_outlier_index_arrai":15,"determine_outlier_index_arrai":15,"determine_reindex_operator_against_refer":[18,19],"detract":76,"dev":[40,53,59,60,75,79,82,84,85,90],"dev20150903":90,"dev20191028":79,"develop":[2,4,7,8,47,89,93,94,95,97,98],"devenish":[0,95],"deviat":[15,35,40,47,53,54,60,63,70,72,74,77,79,81,82,84,85,92],"df":[74,76,82,85,86,87],"dg":[73,75,89,95],"dh":78,"di":[74,76,82,85,86,87,95],"diagnost":[77,78],"diagon":[14,18,77],"dial":[2,3,5,6,8,19,31,32,33,71,72,73,74,75,77,78,80,82,84,85,86,87,92,99],"dials_data":82,"dials_dyn":44,"dials_env":[7,90],"dials_regress":9,"dials_scale_user_guid":[82,85],"dials_scratch":[53,59,60],"dials_tutori":79,"dialsindexerror":[11,19],"dialsindexrefineerror":[11,19],"diamet":73,"diamond":[0,35,80,81,82,83,84,85,86,89,90,91,98,99],"diamond_build":90,"diao":95,"dict":[14,15,18,21,23,24,25,26,33],"dictat":14,"dictionari":[4,15,18,21,22,23,24,25,28,29,30,44],"did":[75,77,81,83,97],"didn":[82,83,85,86],"diederich":[40,97],"diff":33,"diff_phil":33,"differ":[1,2,4,6,14,18,33,38,39,40,42,50,53,54,63,69,72,74,75,76,77,81,82,83,85,86,87,93,95,97],"difference_rotation_matrix_axis_angl":11,"differenti":[74,82,85,86],"difficult":[11,53,74,78,81,83,86],"difficulti":[73,77,78],"diffract":[0,2,3,11,21,35,37,42,44,45,47,51,53,54,59,63,64,66,69,72,73,74,75,77,78,81,82,83,85,86,93,95,96,97,98],"diffus":[94,95],"difior":95,"digit":52,"dim":[14,18],"dimens":[11,14,18,23,40,53,59,60,63,72,74,76,82,83,85,86],"dimension":[18,53,82,85,95],"dimensionless":11,"dimer":77,"direct":[2,3,4,11,21,23,25,34,38,44,52,53,59,60,64,69,73,74,76,77,78,82,85,86,89,91,93],"direction_toler":24,"directli":[0,3,48,73,78,79,81,82,83,85,86,96],"director":93,"directori":[4,7,9,24,29,30,44,45,52,57,60,73,74,75,76,79,82,83,87,90,92],"dirti":83,"disabl":[1,14,38,47,50,51,53],"disable_parallax_correct":[47,50,51],"disable_unit_cell_volume_sanity_check":53,"disablempmixin":[14,19],"discard":[63,64],"disclaim":91,"disconnect":2,"discov":[4,81],"discret":[53,59,60,63],"discuss":[0,76,82,84,85,86,93,97],"diseas":0,"disk":48,"disord":77,"dispatch":9,"dispers":[31,45,47,51,75],"dispersion_extend":47,"dispersion_spotfinder_threshold_ext":31,"dispersionspotfinderthresholdext":[31,32],"displac":[2,11],"displai":[7,38,40,45,48,51,72,75,77,82,85,86],"dispos":[76,78],"disproportion":[82,85,86],"disregard":1,"dist":[48,75],"dist1":53,"dist3":53,"dist_path":4,"distanc":[2,11,16,23,40,51,52,53,54,59,60,64,73,75,81,82,83,84,85],"distinct":[2,72,76],"distinct_clust":72,"distl":[49,71],"distort":[75,78,82,85,86],"distribut":[4,18,53,59,60,65,75,76,82,85,86,91,96],"dive":74,"diverg":[3,21,41,51,52,54,58,74,82,84,85,86],"divid":[53,59,60,63],"divis":4,"divisori":3,"dj":95,"djb":74,"dk":[78,95],"dl":[33,78,79,82,85],"dls_sw":79,"dmax":[17,74,82,83,84,85],"dmin":[17,74,82,83,84,85],"do":[1,6,7,9,11,12,14,16,21,31,33,38,41,47,51,53,54,58,59,60,63,64,72,73,74,75,76,77,79,82,85,86,87,92,97],"do_spars":14,"do_stil":14,"doak":95,"dobbek":95,"docker":95,"docstr":63,"document":[1,54,63,79,91],"doe":[2,7,14,17,36,44,51,52,53,55,62,73,74,81,82,83,85,86],"doesn":26,"doi":[11,18,47,53,59,60,75,82],"domain":[53,74],"domain_size_ang":22,"domain_size_toler":22,"domin":[82,85,86],"don":[1,33,35,38,71,81,83],"done":[3,14,15,44,46,47,53,54,57,59,60,62,68,73,74,75,76,77,78,81,82,83,85,86,87,92],"dose":[63,72,81],"dose_decai":[15,63,72],"dosedecai":15,"dosedecayscalingmodel":15,"dot":[76,82,85],"doubl":[4,10,14,22,23,25,81,90],"doubt":73,"douthit":95,"down":[1,73,74,77,82,85,86],"download":[7,48,71,73,74,75,78,82,84,85,86,90],"downstream":[44,63,72,74,75,76,82,84,85,86,87],"doyl":95,"dozen":76,"dp":[78,86,95],"dpf3":80,"dpf3_247398":78,"dr":[0,53,59,60,95],"draw":73,"drevon":0,"driessen":[53,59,60],"drift":[74,75],"driven":86,"drmaa":[47,54],"drop":86,"drug":0,"due":[1,14,15,63,72,73,82,85,86,87],"dui":80,"dummi":75,"dumoux":95,"dump":[24,32,33],"dure":[1,2,4,14,15,40,41,48,49,50,51,53,54,58,59,60,63,72,73,74,75,76,77,82,83,84,85,86,95,96],"dw":95,"dx":[26,52,53,59,60,75],"dxtbx":[3,4,9,10,11,14,32,73,75,81,82,83,84,85,95],"dxtbx_ed_format":[73,75],"dxtbx_model_ext":21,"dxtbx_name":30,"dy":[26,52,53,59,60,75],"dyn":[48,95],"dynam":[44,45,51,52,54,58,95],"dynamic_shadow":[45,51,52],"dzikowski":95,"e":[1,2,3,4,6,7,11,14,15,18,25,35,40,43,47,49,52,53,54,59,60,61,63,64,66,69,72,73,74,76,77,82,83,84,85,86,87,90,92,95],"e1":[57,62,95],"e2":[7,57,62],"e2_rang":[1,63,72],"e3":[57,62],"e_refin":11,"ea":95,"each":[1,2,11,12,14,17,18,33,35,38,40,42,47,52,53,54,59,60,63,64,65,66,67,68,69,72,73,74,75,76,78,81,82,83,84,85,86,87,92,93,96],"earli":[78,83],"earlier":[74,75],"eas":14,"easi":[77,82,83,85,86],"easier":[23,25,74,82,85],"easili":[2,4,74],"easy_mp":83,"easy_run":83,"echo":[83,92],"echol":[0,95],"ed":95,"edg":[47,50,51,53,54,59,60,73,75,76,87,97],"edit":[3,36,73,81,83,86],"editor":[73,74,83],"edmand":[0,95],"eec":11,"effect":[2,14,35,47,53,59,60,63,74,76,81,82,83,85,86],"effici":[1,3,14],"effort":[0,81,83,93],"eg":95,"ehrensberg":95,"ei":78,"eiger":[48,76],"eiger16mnov2015":48,"eighteen":74,"eisenberg":95,"either":[0,1,2,4,24,40,44,47,48,51,52,53,58,59,60,63,68,70,73,74,79,82,85,86,96],"el":95,"elbaum":95,"electron":[0,11,21,47,52,53,73,74,75,89,93,95,97],"element":[2,14,15,18,25,40,76,78,82,83,85,86],"elif":95,"elimin":[11,68,76],"eliminate_sys_abs":68,"ellips":75,"ellipsoid":[41,51,54,58,96],"ellipt":75,"els":[1,6,23,86],"email":93,"eman":[53,59,60],"emax":[15,43,63,72],"emb":62,"emphasi":97,"emploi":[14,78],"employe":89,"empti":[24,33,48],"en":[18,64],"enabl":[0,4,38,45,51,52,54,72,83,94,95,96,97],"encapsul":[21,23,25],"encod":3,"encount":[78,79,83],"encourag":1,"end":[2,14,15,33,46,47,52,54,59,63,64,69,72,73,74,77,78,81,82,83,85,86,87,89,96,98],"endeavour":89,"endors":91,"energi":[0,35,89],"enforc":[53,74,77,82,83,85],"eng":[73,95],"engin":[14,18,40,44,53,59,60,63,72],"enhanc":1,"enough":[53,59,60,73,78,81,83,92],"ensur":[2,14,23,26,38,40,63,74,81,82,83,85,86,87,93],"enter":[3,7,14,63,74,86],"enthusiast":76,"entir":[4,47,64,73,77,87],"entri":[2,77],"enumer":83,"env":[4,83],"environ":[0,4,48,75,79,81,90],"enzym":95,"eof":[52,75,85],"ep":[18,53],"epilog":[6,33],"epoch":[3,29,52,82,85],"epsilon":[11,18,53],"eqnarrai":2,"equal":[16,18,35,43,47,53,54,56,59,60,63,66,72,77],"equat":[14,40],"equip":2,"equival":[2,14,15,49,52,60,63,68,78,82,85,86],"era":97,"eriksson":95,"erko":95,"errant":83,"error":[1,9,14,15,18,35,40,44,52,53,59,60,63,70,72,74,75,82,85,86,92,95],"error_model":[1,15,63],"error_model_group":[1,63],"error_param":15,"ersatz":44,"esd":[14,87],"especi":[11,53,73,85,86],"essenc":4,"essenti":[2,14,73,76,82,83,85,86],"est_standard_dev":4,"estim":[1,11,14,18,40,42,43,48,49,53,54,59,60,63,67,70,72,76,79,82,85,86,87],"estimate_gain":71,"estimate_global_threshold":[31,32],"estimate_resolut":[71,72,76],"estimate_tim":33,"et":[11,64,72,73,79,95],"etc":[2,18,33,59,70,76,79,87,96],"euclidean":53,"euler":39,"ev":95,"eval":97,"evalccd":44,"evalu":[11,14,15,46,53,76,89,95],"evan":[0,11,18,69,83,89,95,97,98],"even":[1,2,14,44,74,77,78,82,83,86,91],"evenli":11,"event":91,"eventu":[72,82,85,86],"ever":[53,78,97],"everi":[14,38,47,51,53,54,55,59,60,63,66,69,72,76,81,82,83,85,86],"everyth":[7,21,23,25,74,76],"everywher":[23,78],"evid":[73,74,76,77,95],"evolv":[0,93],"ewald":[14,53,59,60,74],"ewald_proximal_volume_max":53,"ewald_proximity_resolution_cutoff":53,"exactli":[6,23,74,78,81],"examin":[11,38,54,73,95],"exampl":[1,2,3,4,6,7,8,21,23,34,35,36,37,38,39,41,42,44,45,46,47,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,65,66,67,68,69,70,74,75,76,77,78,81,82,83,84,85,86,87,92,93,94,96],"exce":[14,52],"excel":78,"except":[4,11,33,47,53,59,60,74,75],"excis":[53,59,60],"excit":44,"excitation_error_cutoff":44,"exclud":[1,14,15,33,44,47,49,53,54,59,60,63,64,66,69,72,74,76,77,82,83,85],"exclude_dataset":[1,63,76],"exclude_imag":[1,47,54,63,69,72,73],"exclude_images_multipl":[47,54,63,66,69,72],"exclude_intensity_perc":64,"exclude_pixel_range_i":64,"exclude_pixel_range_x":64,"exclude_single_crystal_clust":38,"exclus":[1,47,51,54,63,66,69,72,76],"execut":[16,74,83],"executor":[12,19],"executorwrapp":12,"exemplari":91,"exercis":[77,78],"exhibit":83,"exist":[0,1,4,9,15,18,23,50,52,72,82,83,85,86,97],"exit":[3,83],"exocytosi":95,"exp":[35,47,54,63,64,69,72,73,74,78,81,82,83,84,85],"exp_no":33,"expand":[2,68,75],"expand_to_p1":68,"expect":[2,7,14,18,35,44,63,73,74,75,77,78,81,82,83,85,86,97],"expected_cc":18,"expens":[14,86],"experi":[0,1,2,4,5,11,12,14,15,16,17,18,23,24,30,31,33,35,36,37,38,40,41,44,46,47,50,52,53,54,55,58,59,60,61,63,64,65,66,69,70,72,73,74,75,78,81,82,83,84,85,86,87,89,92,95,96,97],"experienc":78,"experiment":[2,3,4,7,11,26,38,52,53,59,60,61,63,64,66,70,74,75,76,77,82,85,86,87,88,96,97],"experiment_data":6,"experiment_file_object_list":33,"experiment_identifi":33,"experiment_list":[3,4,11,27,30,32,33,83],"experiment_list_for_cryst":11,"experiment_typ":14,"experimentlist":[3,4,11,14,16,24,27,33,83],"experimentlistfactori":[24,27],"experiments_":[87,92],"experiments_0":[38,40,87],"experiments_1":[38,40,81,87],"experiments_2":[40,87],"experiments_3":[40,87],"experiments_and_reflect":83,"experiments_filenam":[38,66],"expert":[0,86],"expert_level":[7,38,40,41,43,45,46,47,50,51,52,53,54,55,57,58,59,60,61,62,63,66,69,70,72,82,85],"explain":[40,74,76],"explan":9,"explicit":[2,53,59,60,82,85,86],"explicitli":[1,54,74],"explor":[2,74,78,82,86,95],"exponenti":15,"export":[1,18,30,33,45,63,71,74,75,81,83,88],"export_al":83,"export_as_json":11,"export_bitmap":71,"export_mtz":[32,33,83],"export_reflect":11,"export_text":[32,33],"expos":[0,14],"exposur":[46,52,82,85,86],"exposure_tim":[3,29],"express":[2,46,87,91],"expt":[1,3,6,34,35,36,37,38,39,40,41,42,43,44,45,46,47,50,51,52,53,54,56,57,58,59,60,61,62,63,64,65,66,67,68,69,70,72,73,74,76,77,78,81,82,83,84,85,87,92,96],"expt_path":83,"extend":[5,11,24,33,41,51,54,58,72,78,81,82,85,86,94],"extens":[1,4,32,41,45,47,51,54,58,59,70,74,75,89,94],"extent":[1,72,82,85],"extern":[4,14,16,62,74,86,93],"external_deltapsi":[53,59,60],"external_depend":62,"external_lookup":26,"externaldelpsiweightingstrategi":[14,19],"externallookup":[26,27],"externallookupitembool":[26,27],"externallookupitemdoubl":[26,27],"extra":[14,30,48,53,59,60,81,86],"extra_filenam":30,"extract":[11,16,33,78,82,83,84,85,86],"extract_reference_intens":[18,19],"extractpixelsfromimag":[16,19],"extractpixelsfromimage2dnoshoebox":[16,19],"extractspot":[16,19],"extractspotsparalleltask":[16,19],"extrapol":52,"extrapolate_scan":52,"extrem":[53,59,60,62,78,81,83,95,97],"ey":[82,85,86],"f":[2,6,18,74,75,76,82,84,85,86,87,95],"fabl":95,"face":[77,81,89],"facil":[0,44,83,89,93,97],"facilit":[0,97],"fact":[40,74,75,77,78,81,83],"factor":[1,3,14,15,18,35,40,53,63,64,66,72,73,77,79,81,82,83,84,85,86,87],"factori":[4,14,16,21,23,25,26,28,29,33,81],"fail":[14,53,59,60,73,74,82,83,84,85,87,92],"fail_on_bad_index":[41,51,54,58],"failed_during_profile_fit":46,"failed_during_summ":46,"failur":[53,59,60,72,78],"fair":83,"fairli":[73,74,75,78,81,82,85,86],"fall":[38,47,50,51,54,72,74,81,82,85],"falloff":[38,43,54],"fals":[1,4,6,11,14,15,16,17,22,23,24,26,31,33,37,38,40,41,43,44,45,46,47,48,50,51,52,53,54,55,57,58,59,60,63,64,65,67,68,70,72,73,74,75,82,83],"famili":32,"familiar":[83,86],"familiaris":1,"far":[76,81,83,87],"fast":[11,23,33,38,47,50,51,52,53,59,60,73,74,75,83,85,95],"fast_axi":[3,23,38,52,75,82,85],"fast_axis_toler":[23,24],"fast_direct":23,"fast_slow_beam_centr":[52,73],"faster":[47,50,51,53,59,60],"favour":[74,77,82,85,86],"fd":95,"fe":95,"feasibl":83,"featur":[73,74,75,77,83,89,95],"feb":95,"februari":99,"feburari":99,"fed":73,"federici":95,"feed":83,"feedback":49,"feel":[74,82,83,85],"fel":97,"femtosecond":[74,95],"feng":95,"fetch":51,"few":[50,53,59,60,73,74,77,78,81,83,93,96],"fewer":[38,74,96],"ffbidx":53,"ffbindex":11,"fft":[11,53,74,82,83,85,86],"fft1d":[4,11,53,82,83,85,96],"fft3d":[4,11,53,86],"fi":75,"fib":93,"field":[0,11,33,86,97],"fifth":86,"fifti":[73,95],"figsiz":11,"figur":[64,73,74,78,81,83],"file":[0,1,4,7,8,21,23,24,25,29,30,33,35,36,37,38,40,41,42,43,44,45,46,47,48,50,51,52,53,54,55,58,59,60,61,62,63,64,69,70,72,73,74,75,76,77,78,79,81,82,83,84,85,86,87,90,92,96],"file_nam":[11,48],"filenam":[11,14,16,18,24,26,29,30,33,36,38,41,44,46,47,50,52,53,54,58,59,60,61,63,66,68,69,70,74,76,83,86,96],"filename_object_list":33,"filename_or_data":16,"filename_or_non":[27,30],"filename_prefix":44,"filename_to_absolut":[27,30],"filepath":63,"fill":45,"filter":[11,12,14,15,16,18,38,40,41,44,45,46,47,48,50,51,53,54,58,63,70,72,74,75,82,84,85,86],"filter_by_likelihood":11,"filter_by_n_index":11,"filter_by_volum":11,"filter_doubled_cel":11,"filter_ic":[11,53],"filter_ice_r":[33,44],"filter_integrated_centroid":70,"filter_known_symmetri":11,"filter_ob":14,"filter_overlap":[11,53],"filter_reflect":71,"filter_similar_orient":11,"filter_spot":16,"filterrunn":[16,19],"final":[1,12,14,53,59,63,70,72,73,74,76,81,82,83,85,86,87,89],"final_list_of_fil":83,"final_outlier_arrai":15,"finalis":[12,14],"finalize_reflect":12,"find":[0,1,4,9,11,16,24,38,42,45,47,50,51,52,53,54,64,72,76,77,81,83,84,90,92],"find_basis_vector":[4,11],"find_crystal_model":[4,11],"find_lattic":11,"find_matching_symmetri":11,"find_max_cel":11,"find_rotation_axi":74,"find_spot":[3,16,48,49,53,67,71,73,74,75,76,78,81,82,83,84,85,86,87,96],"find_spots_cli":49,"find_spots_serv":71,"finder":[16,82,85],"fine":[53,59,60,74,81,82,85,86,92,97],"finish":[12,33,63,82,85,86],"finit":18,"firefox":76,"first":[1,4,12,15,18,23,25,26,34,38,40,45,46,52,53,54,56,59,60,64,68,70,73,74,75,76,77,78,81,82,83,84,85,86,87,92,95,97],"firstli":77,"fischetti":95,"fit":[3,12,35,41,43,51,54,58,60,63,70,72,73,74,76,77,78,81,82,83,84,85,86,91],"fit_method":[41,51,54,58],"fit_profil":12,"fix":[2,14,15,25,35,38,41,51,52,53,54,58,59,60,63,73,74,75,77,78,79,81,82,83,85],"fix_initi":63,"fix_initial_paramet":15,"fix_list":[53,59,60,75],"fixed_compon":15,"fixed_rot":[3,25,38,52],"fixed_rotation_matrix":25,"fixed_rotation_toler":[24,25],"flag":[3,6,14,15,16,44,46,53,54,59,60,65,70,72,82,83,85],"flag_express":46,"flag_filt":44,"flaig":95,"flat":[12,35,47,74,82,85,86],"flatten":[12,18,33],"flatten_experi":[6,32,33],"flatten_reflect":[6,32,33],"flex":[3,4,11,14,15,83],"flight":[16,24,94],"float":[4,10,11,14,15,18,21,22,23,25,33,35,37,38,40,41,43,44,45,46,47,50,51,52,53,54,56,57,58,59,60,62,63,64,66,68,69,70,72],"flood_fil":53,"floor":2,"flueckig":74,"flux":[21,52,82,85],"fn":11,"foadi":83,"focu":[73,76,84,89,94],"focus":95,"focuss":76,"fold":[63,93],"folder":[48,76,85,86],"follow":[0,1,2,3,6,7,9,14,18,40,43,46,48,52,53,54,64,66,73,74,75,76,77,78,81,82,83,84,85,86,90,91,92,93,96,97],"font_siz":68,"fontsiz":45,"footprint":73,"for_a_sampl":18,"forc":[14,16,17,38,41,44,47,51,53,54,58,59,60,73,78,82],"force_2d":47,"force_stat":[17,41,51,53,54,58,59,60,73,75],"force_static_model":[33,44],"foreground":[31,54,74,82,84,85],"foreground_background":54,"foreground_foreground":54,"foreseen":78,"forgiv":81,"fork":[24,94],"form":[2,7,14,30,43,47,53,54,59,60,72,74,76,77,78,82,83,85,86,91],"formal":97,"format":[1,2,3,18,23,24,26,30,33,44,45,47,51,52,54,55,57,63,69,72,73,74,75,79,81,82,83,84,85,86,87,95,96,98],"format_class":26,"format_epilog":33,"format_help":33,"format_kwarg":[24,26,33],"formatbaseclass1":4,"formatbaseclass2":4,"formatbruk":4,"formatbrukerfixedchi":4,"formatbrukerphotonii":4,"formatcbfminipilatu":[4,82,83],"formatcbfminipilatusdls6msn100":[84,85],"formatcbfminipilatusmybeamlin":4,"formatcbfminitimepix":75,"formatmyclass":4,"formatsmvcetad_tui":73,"formatsmvtimepix_su_516x516":74,"formatt":33,"formatter_class":33,"formula":[14,18,40,72,82,85],"fortran":95,"forum":97,"forward":[40,54,76],"found":[2,4,6,11,16,40,47,48,49,52,53,63,64,73,74,75,78,79,81,82,83,84,85,86,96],"four":[1,73,76,87],"fourier":[53,69],"fpercent":33,"frac":[2,35,81,82,85,86],"frac_binsize_cutoff":14,"fraction":[2,3,11,16,21,38,41,46,47,51,52,53,54,58,59,60,72,82,85],"fraction_index":11,"fraction_of_bin_s":[53,59,60],"fractionalis":2,"fragment":82,"frame":[3,11,12,14,21,22,23,25,33,34,35,44,47,48,54,63,68,69,72,75,76,82,85,86,97],"frame0":12,"frame1":12,"frame_hist":[12,19],"frame_numb":48,"frame_value_":75,"frame_value_018":75,"frames_per_block":52,"framework":[0,2,4,6,89,95],"frank":97,"fransson":95,"fraser":95,"free":[0,63,72,73,74,77,79,82,83,85,89,95,97],"free_set_offset":63,"free_set_percentag":63,"freedom":[2,40,53,59,60,72,81],"freerflag":73,"frequenc":[11,53],"frequent":7,"fresh":86,"friedel":[73,78,82,85],"frisina":95,"from":[0,1,2,3,4,6,7,9,11,14,15,16,18,21,22,23,24,25,26,29,30,33,35,38,40,41,44,45,47,48,50,51,52,53,54,55,57,59,60,61,62,63,64,66,69,72,73,74,75,76,77,78,79,81,82,83,84,85,86,87,89,90,91,92,93,94,95,96,97,98],"from_arg":24,"from_data":[4,15],"from_dict":[4,15,21,22,23,24,25,28,29,31],"from_fil":[3,24,83],"from_filenam":24,"from_imageset":26,"from_imageset_and_cryst":24,"from_json":24,"from_json_fil":[14,24],"from_mosflm_matrix":22,"from_paramet":[11,16],"from_parameters_and_experi":14,"from_parameters_data_experi":14,"from_parameters_reflections_experi":14,"from_phil":[12,21,23,25,29],"from_pickle_fil":24,"from_sequence_and_cryst":24,"from_serialized_format":24,"from_stills_and_cryst":24,"from_sunbird":48,"from_templ":[24,26],"from_xd":24,"front":[73,95],"fry":95,"fuent":[0,89,95,98],"full":[1,3,4,14,21,23,74,76,81,82,83,85,86,96],"full_matrix":[1,63],"full_matrix_engin":63,"full_matrix_max_iter":[1,63],"fuller":95,"fuller_kapton":54,"fulli":[0,2,44,46,54,74,81,82,84,85],"fully_buff":83,"func":83,"function":[1,2,7,11,12,14,15,16,18,26,36,40,43,53,54,59,60,63,64,74,81,82,83,85,86,93,94],"fund":[0,94],"fundament":[2,14],"further":[0,1,4,7,15,48,63,72,77,81,82,84,85,86,87,90,96],"futur":[94,97,98],"g":[0,1,2,3,6,7,11,14,15,18,30,40,47,49,52,53,54,59,60,61,63,64,66,69,72,73,76,77,79,82,83,84,85,87,89,90,95],"g06727c3":75,"g73f70f18":79,"gain":[0,23,26,33,42,45,47,51,52,73,74,75,78,82,85],"gain_map":[42,47],"gaithersburg":35,"gallo":95,"gambin":74,"gamma":[2,18,40,87],"ganesh":[73,95],"garib":[0,98],"gasparotto":11,"gauss":14,"gaussian":[15,31,41,47,51,54,58,82,85,86],"gaussian_r":[4,31,41,51,54,58],"gaussian_rs_profile_model_ext":[4,31],"gaussianrsprofilemodelext":[31,32],"gaussnewton":[53,59,60,63],"gaussnewtoniter":[14,19],"gb":[79,81,82,85],"gc3eb48f2d":[40,82,85],"gd77d5dad1":[],"gee":95,"gemmi":33,"gener":[0,1,3,4,11,12,18,24,25,29,33,35,45,46,47,50,51,52,53,54,56,57,60,62,63,66,67,68,72,74,75,76,81,82,83,84,85,86,87,89,93,94,96,97],"generalis":0,"generate_distortion_map":75,"generate_from_phil":23,"generate_mask":[71,73,75],"generate_phil_scop":[12,16,19],"genuin":40,"geometri":[2,3,4,11,33,44,52,53,59,60,66,74,75,77,80,81,82,85,86,87,95,96,98],"gerard":[0,97],"gerstel":[0,89,95],"get":[1,8,14,16,17,23,24,25,26,29,30,33,54,74,76,81,82,83,85,86],"get_a_as_sqr":22,"get_a_inverse_as_sqr":22,"get_accepted_refs_s":14,"get_alpha_angl":25,"get_angl":25,"get_angle_from_array_index":6,"get_array_rang":[6,26],"get_ax":25,"get_beam":[26,30],"get_cbf_head":4,"get_centroid_analys":14,"get_corrected_data":26,"get_correlation_matrix_for_step":14,"get_crystal_symmetri":22,"get_data":[26,33],"get_detector":[26,30],"get_detectorbas":26,"get_direct":25,"get_domain_size_ang":22,"get_elapsed_tim":33,"get_entri":[32,33],"get_experi":14,"get_fixed_rot":[6,25],"get_flag":6,"get_format_class":26,"get_free_reflect":14,"get_gain":26,"get_goniomet":[26,30],"get_grid_s":26,"get_half_mosaicity_deg":22,"get_image_identifi":26,"get_index":14,"get_inverse_ub_matrix_from_xparm":[32,33],"get_kappa_angl":25,"get_kappa_axi":25,"get_mask":26,"get_master_path":26,"get_match":14,"get_max_inscribed_resolut":23,"get_max_resolut":23,"get_mosa":22,"get_nam":[23,25],"get_nrow":14,"get_num_match":14,"get_num_matches_for_experi":14,"get_num_matches_for_panel":14,"get_num_scan_point":25,"get_num_step":14,"get_ob":14,"get_omega_angl":25,"get_omega_axi":25,"get_panel_intersect":23,"get_param":26,"get_param_report":14,"get_parameter_correlation_matrix":14,"get_path":26,"get_pedest":26,"get_phi_angl":25,"get_phi_axi":25,"get_process":83,"get_raw_data":26,"get_raw_data_from_imageset":55,"get_ray_intersect":23,"get_rotation_axi":25,"get_rotation_axis_datum":[6,25],"get_s0":6,"get_sample_s":14,"get_scan":[26,30],"get_scan_axi":25,"get_setting_rot":[6,25],"get_setting_rotation_at_scan_point":25,"get_shared_compon":15,"get_space_group_type_from_xparm":[32,33],"get_spectrum":26,"get_templ":[26,30,83],"get_vendor":26,"get_vendortyp":26,"get_wavelength":6,"get_weighting_strategy_overrid":14,"getcwd":83,"getlogg":83,"gevorkov":11,"gf37b0db7a":79,"gf88516da7":84,"ghani":83,"giacovazzo":2,"gilchrist":95,"gildea":[0,11,18,40,72,89,95],"gingeri":95,"ginn":95,"github":[9,75,79,82,85,90],"githubusercont":[9,48,73,75],"give":[1,2,7,14,18,40,45,46,53,59,60,61,66,69,72,74,76,77,78,81,82,83,84,85,86,96],"given":[0,1,2,4,11,14,15,16,17,18,22,23,25,28,30,35,39,40,41,44,46,47,49,51,52,53,54,55,58,62,63,64,67,68,69,72,74,78,82,83,85,86,96],"gj":95,"glacio":73,"glatzel":95,"gleb":0,"glen":95,"glide":87,"glm":54,"global":[47,53,54,59,60,64,74,83],"global_threshold":[45,47,51,75],"globular":[82,85,86],"glownia":95,"gltbx":33,"glu":9,"gl\u00f6ckner":95,"gmail":79,"gmodel":54,"gmt":84,"gn":[63,95],"go":[47,54,63,69,72,73,74,76,77,78,79,80,81,82,83,84,85,86,87],"goal":[2,89],"goe":73,"goldschmidt":95,"gon_kappa":85,"gon_omega":85,"gon_phi":85,"gone":[82,85,86],"gonen":95,"gonimomet":2,"goniomet":[3,4,6,24,26,27,32,34,35,38,52,53,59,60,74,75,78,82,83,85,92,95],"goniometerbas":25,"goniometercomparison":[24,27],"goniometerfactori":[25,27],"goniometershadowmask":26,"goniostat":2,"gonzalez":95,"gonz\u00e1lez":95,"good":[11,38,63,72,73,74,76,77,78,79,81,82,83,85,86,87,91],"good_result":83,"got":83,"gov":[9,35,48],"gpu":[93,97],"grad":18,"gradient":[14,18,53,59,60],"gradient_calculation_blocks":[14,53,59,60],"gradient_cutoff":[16,47],"gradient_threshold":14,"graem":[0,97,98],"grain":[53,59,60],"grant":[0,89,93],"graph":[53,56,59,60,73,86],"graph_verbos":11,"graphic":[0,76,82,85,86],"grate":0,"grayscal":51,"great":[73,77,86],"greater":[18,41,44,47,51,54,58,63,64,78,83,96],"greatest":[11,81],"greatli":[0,89,97],"green":[82,85,86],"greisman":95,"grep":83,"greyscal":45,"grid":[1,11,37,41,49,51,53,54,58,63,64,78,81,82,85,86,96],"grid_h":37,"grid_k":37,"grid_l":37,"grid_method":[41,51,54,58],"grid_search_scop":53,"grid_siz":[26,41,51,54,58,62,81],"gridsiz":68,"grime":95,"gross":[0,2,11,95],"grossli":78,"ground":0,"group":[1,2,4,11,15,18,22,23,33,37,40,43,45,46,47,50,51,52,53,59,60,61,63,69,72,73,74,75,76,77,78,79,81,82,83,84,85,86,87,95,96],"group_info":11,"group_siz":[63,72,74],"groups_cach":11,"grow":[73,76,77],"gruen":[75,95],"guarante":[54,86,87],"guenther":95,"guess":[64,72],"guess_posit":64,"gui":[51,93],"guid":[9,63],"guidanc":0,"gul":95,"gwyndaf":[0,83,97,98],"gz":[44,48,85,87,90],"gzip":75,"g\u00e4tcke":95,"h":[0,2,35,37,53,61,73,74,75,77,78,82,83,84,85,95],"h5":48,"ha":[1,4,7,11,14,15,21,23,25,29,35,40,53,59,60,64,73,75,76,77,78,81,82,83,85,86,87,89,92,93,96,97],"haa":95,"habit":95,"had":[73,77,81,82,83,85,86],"half":[40,43,53,72,74,77,79,82,85,86,87],"half_dataset":[33,43,72],"half_mosaicity_deg":22,"half_mosaicity_toler":22,"hall":[81,95],"hammerslei":2,"han":[0,95],"hand":36,"handi":9,"handl":[2,16,23,24,25,29,33,74,75,76,83,84,98],"happen":[73,78,82,84,85,86],"happi":[82,83,84,85,86],"happili":83,"hardli":74,"hardwar":0,"harmon":[1,63,72,87],"harri":[0,98],"has_dynamic_mask":26,"has_projection_2d":23,"has_single_file_read":26,"hassanul":83,"hat":35,"hattn":[0,95],"haupt":95,"have":[0,1,2,4,7,18,25,35,36,40,42,44,47,52,53,54,59,60,63,71,72,73,74,75,76,77,78,79,81,82,83,84,85,86,87,92,96,97],"hay":95,"hcluster":53,"hdf5":[24,93],"head":[32,33],"header":[4,9,23,26,29,52,73,74,77,78,83,84],"health":[0,89,93],"hear":79,"heart":0,"heat":86,"heatmap":[45,51,62],"heavi":[0,63,76],"hecksel":95,"hedman":95,"heed":78,"height":[47,53,54,59,60,72],"hekstra":95,"held":[0,2],"hellmich":95,"help":[1,4,6,18,21,24,29,33,35,36,37,38,40,41,42,43,44,45,46,47,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,65,66,68,69,70,72,73,74,76,78,81,82,85,86,87,93,96,97],"help_messag":6,"helper":33,"hemispher":11,"hemozoin":95,"henc":[29,35,82],"hennessi":[73,95],"herbert":93,"here":[0,2,6,14,40,48,52,57,62,63,64,71,73,74,75,76,77,78,79,80,81,82,83,84,85,86,87,92,94],"heurist":86,"hewitt":95,"hice":95,"hidden":[14,81],"hide":[40,82,85],"hieararchy_level":81,"hierarch":[38,40,53,59,60,72,81],"hierarchi":[4,23,52,53,59,60,75,81],"hierarchy_level":[53,59,60,81],"high":[0,1,11,18,35,37,38,40,46,47,48,50,51,53,54,63,72,73,74,75,76,78,79,81,82,83,84,85,86,87,89,96,97],"higher":[1,4,11,53,63,73,74,78,82,83,85,86],"highest":[1,11,38,40,54,61,78,81,82,84,85,86],"highli":[74,83,97],"highlight":[76,86],"hilgart":95,"hint":[73,76,78,86],"hist":[12,19],"histogram":[12,53,74,76,82,84,85],"histogram_bin":[11,53],"histor":[9,97],"histori":[14,53,59,60,84,86],"hj":95,"hk":95,"hkl":[2,17,30,39,44,68,78,87],"hkl_limit":68,"hkl_offset":[11,61,78],"hkl_toler":53,"hklf":[44,73],"hklin":[75,85],"hklout":[33,44,73,75,81,83,85,87,92],"hm":95,"hodgson":95,"hohman":95,"hold":2,"holder":91,"hollenbeck":95,"holm":74,"holton":95,"home":[0,7,75],"hopefulli":[4,83],"hopkin":95,"horizont":[2,64],"horrel":95,"host":[48,49,79],"hostnam":49,"hot":47,"hot_mask":[16,47],"hot_mask_prefix":[16,47],"houben":95,"hour":48,"how":[1,4,6,11,14,15,47,53,57,59,60,62,73,74,76,78,81,82,83,85,86,87,95,96,97],"howev":[0,1,2,14,41,42,44,54,61,68,74,75,76,77,78,79,81,82,83,84,85,86,87,91,92,96],"hp":[78,95],"ht":95,"html":[1,40,43,48,62,63,64,69,73,74,76,84,96],"http":[9,11,18,35,47,48,53,59,60,64,73,75,79,82,87,90],"httpd":48,"hu":83,"hubbel":35,"human":3,"hundr":76,"hunter":[74,95],"hussein":95,"huw":0,"hw":95,"hybrid":0,"hypothesi":86,"h\u00f6gbom":95,"i":[0,1,2,3,4,6,7,9,11,14,15,16,18,21,22,23,24,25,26,29,33,34,35,36,38,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,66,68,69,70,72,73,74,75,76,77,78,79,81,82,83,84,85,86,87,89,91,92,93,94,95,96,97],"i04":[82,84,85,86],"i04_thaumatin":79,"i19":35,"i2":[18,40,60,69,72,74,82],"i23":40,"i3_1_0001":48,"i7":[81,83],"i_mean_over_sigma_mean":[43,72],"i_over_sigma":54,"ian":0,"ibarra":95,"ibg":[74,81,82,84,85],"ibrahim":95,"ic":[44,45,46,47,49,50,51,53,54,81,82,85,95],"ice_r":[45,46,47,50,51,54],"id":[1,3,16,33,44,46,52,53,59,60,63,66,67,72,73,74,78,82,83,84,85,89,95],"id_":[4,15],"idea":[0,76],"ideal":[4,33,74,77,87,92],"ident":[6,40,60,76,82,85,87,92],"identif":[53,59,60],"identifi":[4,11,23,24,26,33,40,42,47,52,53,54,56,59,60,63,65,69,72,76,78,82,83,85,86,87],"identifier_typ":52,"identify_outli":11,"idiomat":29,"idxref":30,"iexp":14,"ifs":53,"ifss":53,"ifssr":53,"ignor":[11,26,33,52,53,58,59,60,77],"ignore_shadow":58,"ignore_trusted_rang":23,"ignore_unhandl":[33,52],"ignore_unknown":26,"ih":[15,63,82,85],"ih_tabl":15,"ihtabl":15,"ii":95,"iii":11,"ij":18,"illumin":[82,85,86],"illustr":[35,76,97],"im":[82,85],"imag":[0,1,2,3,4,6,11,12,14,15,16,23,24,26,29,30,31,33,38,41,42,45,46,47,48,49,50,51,52,53,54,55,58,59,60,63,64,65,66,67,68,69,72,74,75,76,77,78,79,81,82,83,84,85,86,87,88,93,95,96,97],"image1":47,"image_":[52,55,65],"image_0001":49,"image_1":52,"image_1_":52,"image_2":52,"image_2_":52,"image_fil":4,"image_group":[63,72,74],"image_pedest":73,"image_pl":23,"image_prefix":55,"image_rang":[3,15,26,29,33,52,53,64,66,73,76],"image_s":[3,23,52,82,85],"image_statist":65,"image_view":[71,73,74,75,77,78,81,82,85,86,87],"image_volum":31,"imagebuff":26,"imagecif":95,"imagedoubl":23,"imagegrid":[26,27],"imager_00":47,"imagesequ":[3,26,27],"imagesequence_from_dict":[27,30],"imagesequence_to_dict":[27,30],"imageset":[3,6,16,24,27,30,32,36,45,47,53,54,55,64,73,74,82,83,84,85,86,92],"imageset_from_anyset":26,"imageset_from_dict":[27,30],"imageset_index":45,"imageset_rang":64,"imageset_to_dict":[27,30],"imagesetdata":[26,27],"imagesetfactori":[26,27],"imagesetlazi":[26,27],"imagin":78,"imean":[33,84,85],"img":[73,74,78,83],"imgcif":[2,21,23,25,29],"imgcif_h":[21,23,25,29],"imid":[1,15,63,82,85],"immedi":[54,75,81,85,86],"impact":[2,14,73,87],"imping":54,"implement":[4,11,14,15,16,18,23,26,31,40,41,51,54,58,69,78,89,95],"impli":[29,53,59,60,63,78,82,85,86,91],"implicit":[2,54],"import":[1,2,3,4,6,7,24,32,33,42,47,53,64,67,71,74,76,77,81,83,88,96],"important_numb":4,"importantli":15,"impos":[75,84],"improperli":74,"improv":[1,63,73,76,77,78,81,82,83,84,85,86,87,93,95,96],"in_beam_plan":[53,59,60],"in_plac":24,"in_spindle_plan":[53,59,60,73,75],"inaccur":78,"inadequaci":2,"incid":[35,53,59,60],"incident":91,"includ":[0,1,4,11,14,18,24,33,43,44,47,48,49,50,53,54,57,59,60,61,63,64,70,72,73,74,75,76,77,78,81,82,83,85,86,87,89,91,93],"include_bad_refer":54,"include_gui_packag":33,"include_unused_reflect":59,"inclus":[14,40,46,47,53,54,59,60,63,69,72,74],"incom":[1,82,85,86],"incompat":2,"incomplet":[73,74,75,87],"inconsist":53,"incorpor":[81,98],"incorrect":[37,53,74,77,78,87],"incorrectli":[82,85],"increas":[7,14,53,63,72,73,81,82,83,85,86,93,96,97],"increasingli":78,"increment":[18,63,74,76],"inde":[74,78,79],"indent":[4,18,33],"independ":[41,53,59,60,76,81,82,85,86,87,96],"index":[2,3,6,14,15,17,18,19,26,32,37,40,41,44,45,46,47,51,52,54,58,59,60,61,62,63,64,68,70,71,72,76,77,79,81,83,88,92,93,95],"index_assign":[7,53],"index_error":53,"index_magnitud":53,"index_qu":53,"index_reflect":11,"indexed_1":68,"indexed_2":68,"indexed_experi":11,"indexerknownorient":11,"indic":[2,3,4,11,14,15,24,26,39,45,48,49,51,53,54,56,59,60,63,68,72,73,74,75,76,77,78,81,82,83,84,85,86],"indirect":91,"individu":[1,9,40,44,63,65,68,72,73,74,75,76,80,81,82,84,85,87,92,93],"individual_mtz":83,"individualist":97,"industri":[0,73,95],"inelast":[47,74],"infil":30,"infinit":[2,14],"inflat":62,"influenza":95,"info":[11,33,82,83,85],"inform":[1,2,7,9,14,15,18,23,26,41,44,47,48,52,53,59,60,64,70,72,73,76,77,82,83,84,85,86,89],"infrastructur":0,"inherit":[4,14],"ining":38,"init":[30,33],"initi":[1,11,12,14,15,21,23,25,29,53,54,59,60,63,64,72,74,75,77,80,82,83,85,86,97],"initialis":[12,14,15,16,17,18,31,33,82,85],"initialise_smooth_input":15,"initialize_reflect":12,"inject":[26,95],"innov":91,"inp":[30,44],"input":[3,6,7,11,14,15,16,18,29,30,31,33,36,37,38,40,41,44,46,47,51,52,53,54,55,57,59,60,61,63,64,66,69,70,72,73,76,81,82,83,84,85,86,87,96],"input_filenam":30,"ins":[44,73,87],"insensit":47,"insert":4,"insid":[47,76,83],"insidi":78,"insight":[74,76,95],"inspect":[1,4,59,70,76,78,81,82,83,84,85],"inspir":[0,77,78],"instal":[4,8,32,33,48,71,73,75,77,78,79,80,81,83,84,85,86,87],"install_format":[4,73],"installer_dir":33,"instanc":[10,12,14,16,23,24,25,26,29,33,76,78],"instanti":[4,24],"instead":[4,43,63,64,74,77,78,83,86],"institut":[0,35,89,93],"instruciton":44,"instruct":[9,44,74,78,86,90,92],"instrument":[0,44,81,89,93,94],"instrument_nam":44,"instrument_short_nam":44,"insu6_1_mast":48,"int":[2,11,12,14,15,16,18,23,24,25,26,33,37,38,39,40,41,42,43,44,45,46,47,49,50,51,52,53,54,55,56,58,59,60,61,62,63,64,65,66,67,68,69,70,72],"integ":[2,53,66,83,84],"integr":[0,1,3,15,19,30,32,35,40,41,44,46,47,50,51,56,60,61,62,63,66,69,70,71,72,76,77,78,79,81,83,88,92,93,94,95,97,98],"integrate_all_reflect":54,"integrated_":[75,83,92],"integrated_0":96,"integrated_1":[72,75,87,96],"integrated_2":[63,72,75,87],"integrated_3":[75,87],"integrated_4":[75,87],"integrated_5":75,"integrated_6":75,"integrated_7":75,"integrated_data":33,"integrated_experi":75,"integrated_prf":44,"integrated_sum":44,"integrator2d":[12,19],"integrator3d":[12,19],"integrator3dthread":[12,19],"integratorexecutor":[12,19],"integratorflat3d":[12,19],"integratorsingle2d":[12,19],"integratorstil":[12,19],"intellectu":0,"intellig":33,"intend":[7,35,44,49,53,59],"intens":[0,1,3,11,15,18,33,35,37,40,43,44,46,47,49,53,54,61,63,64,72,73,74,77,78,82,83,84,85,86,87,94,96,97],"intensity_choic":[1,33,63],"intensity_rang":[1,63,72],"interact":[0,63,74,75,86,87],"interest":[2,16,47,72,73,81,83],"interfac":[0,14,16,18,41,51,54,58,74,80,83,86,93],"intermedi":[45,53,54,83,95],"intern":[2,26,59,63,72,76,93],"internet":[51,62],"interpret":[6,47,63,73,74,75,76,78,96],"interrupt":[47,54,63,66,69,72,91],"intersect":[46,64],"intersection_min_width":64,"intersection_rang":64,"intersection_union_ratio_cutoff":53,"interv":[1,15,47,53,54,59,60,63,66,69,72,82,85],"interval_width_degre":[53,59,60],"intervent":83,"intgrat":30,"intris":14,"introduc":[2,75,76],"introductori":80,"inv":14,"inv_d2":10,"invalid":[15,50,74,82,84,85],"invalidphilerror":[32,33],"invers":[2,3,14,40,41,51,54,58,64,72,78,82,85],"inverse_greyscal":45,"inverse_scale_factor":[3,15],"inverse_scale_factor_vari":3,"inverse_ub_matrix":33,"inversion_window_width":64,"invert":[51,52,78,82,85],"invert_rotation_axi":52,"investig":[15,74,75,77,82,83,85,93,95],"invis":95,"invit":0,"invok":1,"involv":[15,35,76],"invvar":63,"io":[4,64,82,85],"ion":95,"iotbx":18,"ioutil":33,"ipanel":14,"iqr":[47,51,53,54,59,60],"iqr_multipli":[53,59,60],"iri":0,"irradi":54,"irrespect":82,"is_consist":24,"is_marked_for_reject":26,"is_scal":[4,15],"is_similar_to":[22,23,25],"is_single_file_read":26,"is_stil":16,"isbn":0,"isfil":83,"isi":94,"isigi_cutoff":[38,54],"isigma":[43,63,72],"isigma_cutoff":[1,63],"isigma_rang":[1,63,72],"isn":81,"isoform":53,"isol":77,"isomorph":[72,76,83],"isotrop":[11,18,40,77],"issu":[14,54,74,76,77,78,79,82,83,85,86,89,92],"item":[11,16,33,53,54,59,60,74,82,84,85],"iter":[1,11,14,16,23,40,41,51,53,54,58,59,60,63,64,72,78,83],"iter_levelord":23,"iter_panel":23,"iter_preord":23,"ithaca":99,"its":[2,14,33,35,40,48,53,59,60,63,70,72,74,75,77,82,85,86,91,94],"itself":[75,81],"iucr":2,"iucrj":95,"ivanova":95,"iwata":[83,95],"j":[2,11,18,35,40,47,53,64,66,72,74,76,79,84,95],"j0":[47,53,64,66],"j1":[47,53,64,66],"ja":95,"jacobian":[14,53,59,60],"jacobian_condition_numb":14,"jame":[0,83,98],"jan":[73,95],"jana2020":44,"jb":95,"jbluic":95,"jd":74,"je":95,"jen":83,"jenkin":0,"jessica":73,"jf":[73,95],"jh":95,"ji":95,"jiang":95,"jiggeri":6,"jim":[0,97],"jl":95,"jm":[75,89,95],"jn":95,"job":[12,16,47,53,54,59,60,63,74,81,82,83,85,86],"job_card":30,"joblist":[12,19],"johan":0,"john":95,"johnson":95,"join":[72,93],"joinpath":4,"joint":[1,3,53,59,60,63,80,81],"joint_analysi":63,"joint_export":83,"joint_index":53,"joint_json":67,"joint_mtz":83,"jon":0,"joti":95,"journal":[0,14,19,53,59,60],"jp":[75,95],"jpeg":45,"json":[3,11,18,24,30,34,36,38,40,43,44,52,54,59,62,63,64,67,68,69,70,75,76,82,85,96],"jul":95,"juli":99,"jump":[78,85],"jun":[75,95],"june":99,"junk":[82,85],"just":[4,11,14,23,25,53,63,73,74,78,81,82,83,84,85,86,93,96,97],"jw":95,"k":[0,2,11,18,37,40,53,61,75,78,82,84,85,95],"k1":[53,59,60],"k2":[53,59,60],"k3":[53,59,60],"kabsch":[0,97],"kai":97,"kaila":95,"kaiser":95,"kaminski":95,"kappa":[25,52],"kappadirect":25,"kappagoniomet":[25,27],"kappascanaxi":25,"kapton":54,"kapton_2019":54,"kapton_half_width_mm":54,"kapton_thickness_mm":54,"karan":0,"katrin":0,"kb":[1,4,15,63,72],"kbscalingmodel":15,"kd":95,"ke":95,"keabl":95,"keedi":95,"keen":78,"keep":[1,14,38,43,44,53,59,60,66,70,72,73,76,81,86,97],"kei":[4,6,14,18,48,76,82,83,85,86],"kelli":95,"kenner":95,"kept":[6,53,59,60,75,76,81],"kern":95,"kernel":[18,40,47,51,64,69,72],"kernel_normalis":18,"kernel_s":[42,45,47,51],"kevin":0,"keyword":31,"kg":35,"khr":9,"kilohertz":11,"kim":95,"kindli":[76,78],"kingdom":91,"kj":74,"klar":95,"klureza":95,"km":95,"knew":74,"know":[0,21,23,25,54,72,73,74,77,82,83,85,86],"knowledg":[0,2,35],"known":[11,25,47,53,64,74,77,78,81,82,85,86,96],"known_axi":25,"known_crystal_model":11,"known_orient":[11,83],"known_symmetri":53,"ko":95,"kobayashi":95,"kobe":74,"kobilka":95,"koglin":95,"koiwai":95,"kok":95,"konstantino":83,"koroidov":95,"kovaleva":95,"kroll":95,"kroon":97,"kruse":95,"kubin":95,"kumar":95,"kunstlev":[0,2,11,95],"kuykendal":95,"kw":[73,95],"kwarg":[11,14,16,24,31,33],"kwd":14,"l":[2,14,18,37,53,61,74,75,76,77,78,82,84,85,87,89,92,95],"l1":75,"l2":75,"l_0":35,"l_1":35,"l_i":35,"l_min":[11,53],"lab":[0,2,45,51,99],"label":[2,14,43,45,47,59,68,70,72,84],"label_indic":68,"labelit":[48,78],"laboratori":[0,11,21,35,68,74,75,83,89,91,93,98],"lack":[82,85,86],"lactamas":[85,86],"lai":95,"laksmono":95,"lambda":35,"lamella":95,"lamp":95,"landscap":95,"lane":95,"laptop":93,"larg":[0,14,44,51,53,59,60,63,70,72,74,75,76,81,82,85,86,87,88,96,97],"larger":[11,53,54,56,59,60,78,93],"largest":[11,14,38,40],"larvicid":95,"laser":[0,95,97],"lassal":95,"last":[12,14,53,59,60,64,74,83],"latch":78,"late":77,"later":[59,64,70,73,86,87],"latest":[7,14,64,79],"latim":95,"latt":73,"latter":[74,82,85],"lattic":[2,3,11,18,40,44,53,72,75,76,78,80,95,96,98],"lattice_group":[18,40,69,72],"lattice_id":18,"lattice_search":19,"lattice_search_strategi":4,"lattice_symmetri":18,"lattice_symmetry_max_delta":[18,40,69,72],"latticesearch":11,"laue":[11,14,18,24,40,53,59,60,69,72,73,76,82,84,85,94,95],"laue_group":[18,69,72],"laue_manag":14,"lauegroupanalysi":[18,19],"laueleastsquaresresidualwithrmsdcutoff":[14,19],"lauemixedweightingstrategi":[14,19],"lauereflectionmanag":[14,19],"lauestatisticalweightingstrategi":[14,19],"launch":[74,86],"law":[82,85],"lawrenc":[0,89,91,93],"layout":86,"lazi":26,"lb":95,"lbfg":[11,14,18,63,82,85],"lbfgs_core_param":11,"lbfgs_termination_param":11,"lbfgs_with_curv":[18,19],"lbfgscurv":[14,19,53,59,60],"lbl":[9,48],"lbnl":[0,89],"lcl":81,"lcv":83,"lcy":87,"le":[11,18,53,78],"lead":[1,53,59,60,77,78,82,83,85,86,93],"learn":[73,74,81,89,95],"learnt":97,"least":[1,14,53,59,60,63,74,82,85,86],"leastsquarespositionalresidualwithrmsdcutoff":[14,19],"leastsquarespositionalresidualwithrmsdcutoffspars":[14,19],"leastsquaresstillsresidualwithrmsdcutoff":[14,19],"leastsquaresstillsresidualwithrmsdcutoffspars":[14,19],"leav":[74,86],"lebedev":77,"lebrett":95,"led":0,"lee":0,"left":[2,35,78,86],"leginon":[73,95],"leginon_offset":73,"leinweb":0,"leiserowitz":95,"lemk":95,"lemmin":95,"len":[4,6,75,83],"length":[11,14,18,33,35,53,72,73,77,81,85],"lepag":40,"lepage_max_delta":60,"lesli":[0,54,97,98],"less":[7,18,40,44,47,50,51,53,54,60,63,69,72,73,74,77,78,81,82,83,85,86,87],"lesson":[73,95],"let":[4,73,74,76,78,81,82,83,85,86],"level":[0,1,4,12,18,38,43,45,47,53,59,60,63,72,74,81,83,86,87,96],"levenberg":[14,82,85],"levenbergmarquardtiter":[14,19],"levi":2,"levmar":[53,59,60,63],"li":[0,2,53,59,60],"liabil":91,"liabl":91,"liang":[74,95],"lib":79,"libgl":9,"librari":[8,30,73,83,93],"libtbx":[4,6,11,15,18,83],"libtbx_refresh":4,"lichtenberg":95,"lie":[2,77],"liebschner":95,"life":78,"light":[0,35,80,81,82,83,84,85,86,91,99],"like":[0,1,2,3,4,7,11,14,26,54,73,74,76,78,79,81,82,83,85,86,87],"likelihood":[18,40,41,51,54,58,69,73,76,82,84,85,86],"likelihood_cutoff":[11,53],"limit":[11,14,37,40,41,43,46,47,49,50,51,53,54,55,58,63,65,67,72,73,74,75,76,79,81,82,83,84,85,86,87,91,95,97],"limit_image_rang":15,"limit_resolution_bi":53,"lin":95,"line":[1,7,9,12,33,52,63,71,73,74,77,79,80,81,82,83,85,86,87,93,96],"linear":[11,14,35,53,54,63,82,83,85,86],"linear2d":54,"linear3d":54,"linearis":14,"linearli":[14,63],"link":[14,65,87],"linkag":53,"linux":[7,24,74,79,81,83],"lisova":95,"list":[4,7,11,12,14,15,16,18,24,25,26,29,30,31,33,35,38,44,47,50,52,53,54,56,59,60,63,64,73,74,75,76,77,78,82,83,85,89,91,92,94,96],"liter":47,"littl":[23,25,73,74,75,76,81,82,85,87],"lj":95,"ll":[74,81,83,85,86],"ll_toler":[41,51,54,58],"lm":[63,95],"lmax":[1,63,72],"load":[6,16,24,26,30,32,33,48,51,63,64,76,79,82,83,85,86,93],"load_average_imag":64,"load_error_model":15,"load_imag":16,"load_model":[24,33,51],"loc":18,"loc_in_list":33,"local":[4,7,45,47,53,62,74,86,90,93],"localhost":48,"locat":[3,18,33,50,53,59,60,83,85,86],"loe":97,"log":[1,11,14,18,33,35,37,38,40,41,43,44,47,50,51,52,53,54,58,59,60,61,63,64,69,70,72,73,74,75,76,78,79,81,82,83,84,85,86,96],"log2":53,"log_summari":[32,33],"logarithm":53,"logfil":83,"logger":83,"logic":47,"login":9,"loglinear2d":54,"loglinear3d":54,"lond":95,"long":[10,12,14,24,25,26,63,74,77,82,85,86,87,95],"longer":[75,81,82,83,84,85],"longest":4,"look":[3,4,47,52,53,59,60,73,74,75,76,77,78,81,82,83,85,86,87,97],"lookup":[47,52,53,54,75],"lookup_symbol":53,"loop":[14,76,83],"lorentz":[82,85,86],"loss":[72,91],"lot":[73,76,81,84,86],"love":79,"lovelac":94,"low":[1,11,37,47,50,51,53,63,72,73,74,75,76,78,79,81,82,83,84,85,86,87],"low_memory_mean":[53,59,60],"low_res_spot_match":[4,53],"lower":[11,18,53,54,59,60,63,73,81,82,85,86],"lower_bound":18,"lowest":[43,63,74,78,82,85,86],"lowresspotmatch":11,"lp":[3,82,85,86],"lr":95,"lsf":[47,54],"lstbx":14,"lucier":[73,95],"luck":73,"lui":[0,98],"lukacik":95,"lundin":95,"lure":11,"lvalu":[10,12,22,23,24,25,26],"lys_ed_dataset_":75,"lys_ed_dataset_1":75,"lys_ed_dataset_2":75,"lys_ed_dataset_3":75,"lys_ed_dataset_4":75,"lys_ed_dataset_5":75,"lys_ed_dataset_6":75,"lys_ed_dataset_7":75,"lysozym":76,"lyubimov":95,"m":[2,11,35,40,46,73,74,76,79,82,84,85,86,89,95,96],"m1000":73,"m2":95,"ma":[95,99],"mac":7,"machin":[48,49,96,97],"machineri":95,"macosx":90,"macro":[53,59,64,78,81,82,85,86],"macrocycl":[53,59,60,74,78,81,82,85,86],"macrocyl":[78,82,85,86],"macromolecul":[82,85],"macromolecular":[0,1,70,94,95],"made":[1,2,15,23,33,35,38,40,53,59,60,74,82,83,85,86,87],"madmergedmtzwrit":[32,33],"magic":4,"magic_paramet":4,"magnif":73,"magnitud":[2,35,62,63,78],"mahalanobi":[53,59,60],"mai":[0,1,2,3,4,7,9,11,12,14,15,18,34,35,40,41,42,46,47,48,49,51,52,53,54,59,60,62,63,66,70,72,74,75,76,77,78,79,81,82,83,85,86,87,90,91,93,95,96,99],"main":[0,3,9,14,23,34,63,71,79,80,85,96],"mainli":[53,54,77],"maintain":[14,48,93],"mainten":93,"major":[7,54,74,78,83,86],"make":[0,2,4,9,15,23,25,45,53,54,55,59,60,63,70,73,74,75,76,77,78,81,82,83,85,86,89,92],"make_app":33,"make_beam":21,"make_combined_plot":15,"make_detector":23,"make_goniomet":25,"make_imageset":26,"make_kappa_goniomet":25,"make_multi_axis_goniomet":25,"make_polarized_beam":21,"make_polychromatic_beam":21,"make_scan":29,"make_scan_from_properti":29,"make_sequ":26,"makita":95,"malaria":95,"mald":74,"mamedov":95,"manag":[1,12,14,53,59,60,63,82,85,98],"mandatori":14,"manglik":95,"mani":[0,2,4,16,38,40,48,73,74,76,77,78,79,82,83,85,86,93],"manifest":78,"manner":[76,82,85,86,96],"manual":[52,73,74,83,87],"map":[11,18,40,42,45,47,50,51,62,65,76,77,78,82,85,86,95],"mar":[11,95],"marcin":0,"margin":[17,41,51,54,77],"mark":[47,74,82,85,86],"mark_for_reject":26,"marker":[82,85],"marker_s":68,"marko":0,"marku":0,"marom":95,"marquadt":14,"marquardt":[14,82,85],"mashor":[73,95],"mask":[3,16,23,26,31,36,46,47,50,51,52,54,66,75,82,85],"mask_gener":16,"mask_param":51,"masker":26,"mass":[35,41,51,54,58,82,85],"master":[48,73,75,76],"master_path":26,"masuda":95,"mat":44,"mat3":[22,25],"mat3_doubl":25,"match":[11,14,18,29,33,38,48,53,59,60,66,74,81,82,83,85,86,87],"match_wavelength":[32,33],"materi":[0,23,35,52,82,85,91],"math":11,"mathbf":[2,35],"mathew":95,"mathsf":2,"matplotlib":[59,70],"matric":[2,39,84],"matrix":[1,6,14,18,22,39,40,44,52,53,57,59,60,62,63,70,72,74,81,82,83,84,85,87],"matter":[51,87],"matthew":0,"matur":81,"max":[40,41,46,51,52,53,54,58,63,64,72,73,74,77,78,79,81,82,83,84,85,86,96],"max_angular_differ":18,"max_batch_s":38,"max_cal":[18,40,72],"max_cel":[19,53,64,82,85,86],"max_cell_estim":53,"max_cell_multipli":11,"max_cell_volume_change_fract":[41,51,54,58],"max_clust":38,"max_cluster_height":72,"max_cluster_height_cc":72,"max_cluster_height_co":72,"max_combin":[11,53],"max_cycl":[63,72],"max_delta":[11,18,53],"max_dist":53,"max_fre":72,"max_height_fract":[11,53],"max_imag":42,"max_it":[41,51,54,58],"max_iter":[14,18,40,53,59,60,63,72],"max_lattic":[11,53,84,96],"max_length":33,"max_memory_usag":54,"max_n_group":[53,59,60],"max_output_cel":53,"max_output_clust":72,"max_pair":53,"max_percent_remov":[63,72],"max_possible_wl":33,"max_quad":53,"max_refin":53,"max_refl":53,"max_reflect":[64,65],"max_reflections_per_experi":38,"max_sample_s":14,"max_separ":[41,47,51,54,58,73],"max_shift_over_esd":14,"max_spot":[53,73],"max_spot_s":[16,47,75],"max_strong_pixel_fract":[16,47],"max_triplet":53,"max_vector":53,"maxd":16,"maxim":[53,59,60,64],"maximis":44,"maximum":[11,15,16,17,18,38,40,41,43,44,46,47,51,52,53,54,59,60,63,64,72,76,82,85,86,87],"maximum_sample_s":[53,54,59,60],"maximum_trusted_valu":47,"mayb":76,"mayer":[73,95],"mc":[74,77,78,79,82,84,85,95],"mcaulei":95,"mcd":[53,59,60,82,83,85,86],"mcdonagh":95,"mcfarlan":95,"mcgilvrai":[73,95],"mcphillip":95,"mcqueen":95,"md":[35,95],"me":[53,95],"mea":84,"mean":[2,10,15,36,42,45,47,51,53,59,60,63,72,74,76,77,81,82,84,85,86],"meaning":2,"meant":75,"measur":[1,2,3,11,14,53,60,63,72,74,76,82,83,84,85,86,95],"mechan":[0,81,83],"med":[81,82,83,85,95],"med_a":[40,96],"med_alpha":[40,96],"med_b":[40,96],"med_beta":[40,96],"med_c":[40,96],"med_gamma":[40,96],"median":[18,40,44,53,59,60,63,72],"median_unit_cel":[18,19],"medic":[0,89,93],"medium":[1,63,72,87],"meet":[0,89,93,97,98],"member":[26,93],"membran":83,"memori":[1,11,14,26,38,53,54,63,81,82,85,93],"memread":[26,27],"mendez":[0,95],"mental":73,"mention":87,"mercado":[73,95],"merchant":91,"mere":92,"merg":[1,33,40,43,44,53,55,59,60,63,72,73,74,76,83,86,87],"merge_cbf":71,"merge_n_imag":55,"merge_panel_scope_extracts_by_id":[23,27],"merged_arrai":33,"merged_mtz":[1,63],"mergedhalfdataset":33,"mergedmtzwrit":[32,33],"mess":[24,54],"messag":[7,33],"messagepack":3,"messerschmidt":95,"messi":78,"messier":78,"messing":95,"met":91,"metadata":[24,33,44,52,63,73,74,75,82,85,86,96],"metal":87,"metalloenzym":95,"method":[0,1,2,7,11,14,15,16,18,25,26,29,40,41,43,47,49,51,53,54,58,59,60,63,64,66,69,72,73,74,78,82,83,85,86,93,95,96,99],"method_i":64,"method_x":64,"methodologi":97,"metr":35,"metric":[40,43,53,60,72,73,74,77,78,82,83,84,85,86,93],"metric_subgroup":18,"metric_supergroup":11,"metrologi":[51,80],"meyer":2,"mh":[74,95],"mi":[74,78,81,95],"miahnahri":95,"michel":[0,89,95],"micro":[0,74,80,93],"microcryst":[73,74,95],"microfocu":97,"micron":89,"microscop":[73,75],"microsecond":95,"micrscop":93,"mid":81,"middl":73,"midpoint":[63,64],"might":[2,4,14,35,74,77,78,81,82,83,85,86],"milathianaki":95,"mileston":93,"mill":[93,95],"miller":[2,3,18,33,39,51,53,56,68,76,77,84,86],"miller_index":3,"miller_indic":11,"millimet":[82,85],"millimetr":[3,74],"million":1,"mimick":77,"min":[41,46,51,52,54,58,73,74,77,78,81,82,83,84,85],"min_cc_half":[18,40,69,72],"min_cel":[11,53],"min_cell_volum":53,"min_chunks":[16,47],"min_cluster_s":[53,72],"min_complet":[63,72,76],"min_component_s":56,"min_group":63,"min_group_s":[53,59,60],"min_i_mean_over_sigma_mean":[18,40,69,72],"min_ih":[63,74],"min_isigi":[33,44,63,82,85],"min_isigma":63,"min_lattic":53,"min_loc":[45,47,51],"min_multipl":[63,72],"min_n_reflect":[41,51,54,58],"min_nref_per_paramet":[53,59,60],"min_pair":[18,40,72],"min_parti":[63,72,82,85],"min_partition_s":54,"min_per_area":1,"min_per_dataset":1,"min_pixel":54,"min_reflect":[40,63,72],"min_reflections_per_experi":38,"min_sampl":53,"min_sample_s":14,"min_scal":44,"min_spot":[41,51,53,54,58,96],"min_spot_s":[16,47,49,73,75,81,82,84,85],"min_wl":33,"min_zeta":[41,51,54,58],"mind":73,"mini":4,"minicbf":75,"minim":[14,18,40,44,72,76,82,85,93,95,96],"minimis":[14,18,39,53,59,60,63,72,82,85,86,88],"minimize_scipi":[18,19],"minimize_scitbx_lbfg":[18,19],"minimum":[11,14,17,18,40,41,43,44,46,47,51,53,54,58,59,60,63,72,76,82,84,85],"minimum_angular_separ":[11,53],"minimum_number_of_reflect":[53,59,60],"minimum_sample_s":[53,54,59,60],"miniut":97,"minor":[7,77],"minut":[81,83,93,97],"mirror":[48,74,82,85,87],"misigma":[43,72],"misindex":[37,53,78],"misorient":81,"miss":[56,73,74,81,88],"misset":[2,82,85,86],"missing_reflect":71,"mitig":11,"mittan":93,"mitzner":95,"mixin":14,"mj":95,"mkdir":[48,73,74,75,76,81,83],"ml":[40,73,82,85,95],"ml_aniso":[18,40,69,72],"ml_aniso_normalis":18,"ml_iso":[18,40,69,72],"ml_iso_normalis":18,"mm":[3,14,23,35,47,50,51,52,53,59,60,74,78,81,82,83,84,85,86,95],"mm_search_scop":[53,64],"mmcif":[44,70,76],"mmm":76,"mmtbx":33,"mn\u2084ca":95,"mod_python":48,"mode":[4,15,18,33,34,40,52,53,59,60,61,63,72,74,75,76,82,83,85,86],"model":[0,3,6,10,11,12,14,18,19,26,27,30,31,32,33,34,35,36,38,39,40,41,42,44,45,47,50,51,52,53,54,57,58,59,60,61,62,63,64,65,66,68,69,70,72,73,74,76,77,81,82,83,84,85,86,87,88,92,95,96,97],"model_evalu":19,"model_likelihood":11,"model_param":15,"modelevalu":11,"modelnam":4,"modelrank":11,"modelrankfilt":11,"modelrankweight":11,"models_1":39,"models_2":39,"models_with_profil":41,"modern":[2,93],"modif":[55,91],"modifi":[15,40,41,47,48,50,53,64,66,73,81,82,83,84,85],"modpython":48,"modul":[2,14,15,18,33,63,77,79,83,85,86],"modular":81,"modulation_correct":[1,63],"modulenotfounderror":4,"mol":[73,95],"molecul":[0,80,95],"molecular":[73,74,75,77,95,98],"moment":[53,59,60,81],"monitor":93,"mono":[11,53],"monochromat":[52,94],"monoclin":[18,40,60,69,72,74,82,85,86],"montero":[0,89,95,98],"month":95,"moor":14,"moral":78,"more":[1,3,4,7,9,11,18,33,36,38,46,47,48,53,54,59,60,63,64,66,69,71,73,74,76,77,78,79,81,82,83,85,86,87,89,92,93,96,97],"moreau":93,"mori":95,"moriarti":[0,2,95],"mosaic":[3,22,41,51,53,54,58,74,79,82,85,96],"mosaiccrystalkabsch2010":[22,27],"mosaiccrystalsauter2014":[22,27],"mosaicity_max_limit":[41,51,54,58],"mosaicity_toler":22,"mosflm":[0,2,22,44,52,54,97],"mosflm_a_matrix":22,"mosflm_beam_centr":52,"mosquito":95,"most":[1,2,4,7,11,15,18,33,35,38,53,54,71,73,74,76,79,82,83,85,86,87,96,97],"mostli":[82,85,86],"motion":95,"motiv":[63,82,83,85],"motor":2,"motorlogi":48,"mount":[2,35],"mous":[73,74,86],"move":[23,33,53,59,60,73,77,81,83,85,86,93],"movement":0,"movi":73,"mp":[47,53,54,59,60,73,77,78,79,82,84,85],"mp_chunksiz":16,"mp_method":16,"mp_njob":16,"mp_nproc":16,"mplex":76,"mpm":48,"mpm_prefork_modul":48,"mpro":80,"mpro_x0692":82,"mr":95,"mrc":98,"mt":74,"mtb":[74,75,95],"mtz":[1,33,40,43,44,61,63,72,73,74,75,76,79,81,83,84,92],"mtz_unmerg":79,"mtzwriterbas":[32,33],"mu":[14,23,35,82,85],"much":[0,9,73,74,78,81,82,83,85,86,87],"mullick":95,"mult":[73,82,84,85],"multi":[1,2,15,16,18,33,38,40,42,44,45,48,51,52,53,54,59,60,63,72,80,82,85,86,95],"multi_axi":25,"multi_axis_goniometer_from_phil":25,"multi_crystal_analysi":72,"multi_dataset":[1,63],"multi_panel":[45,51,52],"multiaxisgoniomet":[25,27],"multipl":[1,3,4,11,16,33,34,36,38,39,43,45,47,50,51,52,53,54,59,60,63,64,66,68,69,70,72,73,74,76,78,79,81,82,83,84,85,86,87,92,96,97,98],"multiple_lattice_search":53,"multiplex":[71,80,95],"multipli":[35,41,47,51,53,54,58,59,60],"multiplicities_h_0":76,"multiplicities_k_0":76,"multiplicities_l_0":76,"multiprocess":[14,24,53,54,59,60,82,85],"multitemperatur":95,"multivari":[41,51,54,58,86],"muon":94,"murshudov":[0,95,98],"must":[1,2,4,7,14,15,33,36,52,53,54,59,60,63,64,66,74,75,76,82,85,86,91],"mutual":[2,51],"muuss":74,"mv":81,"mx":[79,82,85,97],"mx27124":82,"my":4,"my_format_modul":4,"mybeamlin":4,"mycalingmodel":4,"myd88":[74,80],"myeloid":74,"myformat":4,"mylatticesearch":4,"mymodel_phil_str":4,"myparam":7,"mypath":4,"myproject":4,"myscalingmodel":4,"mystrategi":4,"mystrategy_phil_str":4,"n":[0,2,3,4,6,11,18,21,22,33,35,40,54,58,64,72,73,82,84,85,86,95],"n_absorption_bin":[1,63],"n_bin":[15,38,47,51,54,63,72],"n_convolut":64,"n_cycl":[41,51,54,58],"n_digit":44,"n_equat":14,"n_index":11,"n_indexed_cutoff":[11,53],"n_indexed_weight":[11,53],"n_iqr":[47,51],"n_macro_cycl":[41,51,53,54,58,64,78],"n_merg":44,"n_modulation_bin":[1,63],"n_new_param":15,"n_old_param":15,"n_param":15,"n_paramet":[14,82,85],"n_point":[11,53],"n_ref":18,"n_refl":[38,82,85],"n_refl_panel_list":38,"n_resolution_bin":[1,63],"n_shell":72,"n_sigma":[41,51,54,58],"n_spot":53,"n_static_macrocycl":59,"n_subset":38,"n_subset_method":38,"n_subset_split":54,"n_trial":[53,59,60],"n_xtal":[40,96],"na":74,"naismith":95,"nakan":[0,95],"name":[2,3,4,6,7,14,15,23,24,25,26,30,31,33,35,36,42,44,45,48,50,51,52,53,59,60,62,63,66,70,78,79,81,82,84,85,86,87,91],"nangca":95,"nango":95,"nannenga":95,"nano":97,"nanoimag":73,"nanson":74,"narrow":[11,47,51,53,83,86],"nass":95,"nat":[74,95],"nathaniel":0,"nation":[0,35,89,91],"nativ":[18,79,81,84],"nativig":85,"natl":[2,95],"natur":[53,59,60,85,86,95],"nave":53,"navig":[82,86],"nbin":[16,43,63,72],"nc":77,"ndarrai":18,"nearest":[53,54,56,66,86],"nearest_neighbor":11,"nearest_neighbor_percentil":[11,53],"nearest_neighbour":[11,53],"nearli":[11,14,78,81],"neat":[78,81],"necessari":[1,2,11,15,40,54,73,75,76,81,82,85,87,92],"necessit":26,"need":[1,2,4,9,14,16,21,24,25,40,41,47,51,54,58,60,63,73,74,75,76,77,78,81,82,83,85,86,87,90,93,97],"needl":63,"neff":[18,40,72],"neg":[44,73,75,76,79],"neglig":[74,82,85,91],"negro":[73,95],"neighbor":[54,64],"neighboranalysi":11,"neighbour":[53,56,82,85,86],"neither":91,"nelson":95,"ness":53,"nest":[4,15,46],"net":[18,48,82,86,89],"network":95,"netzcc":[40,73,76,82,84,85,86],"neuron":95,"neutron":[0,2,52],"never":81,"nevertheless":[2,77,81],"new":[0,1,2,7,9,14,15,16,23,26,48,53,59,60,63,71,73,74,75,77,78,81,82,83,85,86,89,90,93,94,95,97],"new_image_0":15,"new_image_rang":15,"new_norm_fac":15,"newdir":83,"newli":[82,85],"newton":14,"next":[6,40,74,76,82,84,85,86],"nexu":[33,42,44,93],"nfold":63,"nframe":54,"nframes_hist":[12,19],"ng":95,"ni":73,"nice":[33,73,74],"nicer":81,"nichola":0,"nick":97,"nien":83,"nieusma":[73,95],"nigel":0,"niggli":40,"nightli":[79,90],"nigm":89,"nih":89,"nilsson":95,"nist":35,"nj":[73,95],"njob":[47,54],"nk":[89,95],"nn":53,"nn_hist":11,"nn_per_bin":[11,53],"no_shoeboxes_2d":16,"noauto":72,"node":[23,86],"nois":[42,47,51,75,82,85],"non":[11,14,53,59,60,72],"non_linear_l":14,"non_linear_ls_mixin":14,"none":[1,4,6,10,11,12,14,15,16,17,18,21,22,23,24,25,26,29,30,31,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,50,51,52,53,54,56,58,59,60,61,62,63,64,65,66,67,68,69,70,72,74,78,83,96],"nonisomorph":1,"nonumb":2,"nor":91,"norm":14,"norm_fac":15,"normal":[14,21,35,38,41,51,52,53,54,58,59,60,78,79,82,85,86],"normal_matrix":14,"normalis":[1,15,18,35,37,40,43,63,69,72,82,85],"normalise_bin":37,"normdevoutlierreject":15,"notabl":81,"note":[14,35,74,76,77,78,81,82,83,84,85,86,87,90,96],"noth":[25,52,74],"notic":[77,81,82,85,86,91],"notwithstand":[2,78,81],"nov":95,"novemb":99,"novo":95,"now":[4,6,33,73,74,75,76,77,78,81,82,83,84,85,86,92],"np":18,"nproc":[1,14,16,18,40,47,49,53,54,59,60,63,64,72,73,82,83,85],"npz":64,"nref":[73,74,78,81,82,83,84,85,86],"nref_per_degre":14,"nsigma":54,"nsigma_":[45,51],"nsigma_b":[45,51],"ntry":73,"null":[31,53,54,59,60,81,83],"null_background_ext":31,"nullbackgroundext":[31,32],"nullify_all_single_file_reader_format_inst":24,"num":[82,83,84,85],"num_candidate_vector":53,"num_halfsphere_point":53,"num_reflect":12,"num_scan_point":25,"number":[1,2,4,7,11,12,14,15,16,17,18,33,37,38,40,41,43,44,45,47,48,49,51,52,53,54,55,58,59,60,63,64,65,66,67,69,70,72,73,74,76,78,81,82,83,84,85,86,87,89,95,96],"number_of_partit":54,"numer":[0,1,14,18],"numpi":64,"nune":95,"nureki":95,"nw":95,"nx":[44,47],"nxmx":44,"ny":[47,99],"o":[0,2,4,22,73,75,79,83,90,95],"o2":95,"oa":95,"ob":[73,82,84,85,95],"obj":[4,15,24,28],"object":[2,10,11,12,14,15,16,17,18,21,22,23,24,25,26,28,29,30,31,33,52,53,59,60,66,81,83,97,98],"objective_onli":14,"obliqu":[18,40,60,69,72],"observ":[11,14,16,18,35,40,41,44,53,59,60,62,65,66,69,74,76,78,79,81,82,83,84,85,86,87],"obtain":[1,2,4,9,14,15,40,53,59,60,75,77,78,82,95],"obviou":[75,82,83,85],"obvious":6,"oc":[77,78,79,84,85],"occas":[41,76],"occur":[74,75,82,85,86],"oct":95,"octob":99,"odd":77,"off":[1,18,53,54,59,60,63,73,74,78,82,83,85,86],"offer":[78,97],"offset":[11,15,23,52,53,63,64,74,78,81,82,85],"offsetparallaxcorrectedpxmmstrategi":52,"often":[1,2,4,11,35,53,74],"ogata":95,"ok":[79,86,87],"okai":[73,74,83],"old":78,"old_test_flag_valu":72,"older":[42,86],"oliv":0,"omega":[2,25,52],"omit":[82,85],"onc":[7,40,47,52,53,73,74,76,81,82,84,85,86,87],"one":[0,1,2,6,11,14,15,16,24,36,38,40,44,47,53,54,59,60,61,63,69,70,72,73,74,75,77,78,81,82,83,84,85,86,87,92,96],"one_osc_width":15,"ones":73,"ongo":[83,97],"onli":[1,2,6,7,11,14,18,26,33,36,38,44,45,46,47,53,54,55,56,59,60,63,64,69,70,72,73,74,76,77,78,81,82,83,84,85,86,87,92,96],"onlin":[35,74,75],"only_save_target":63,"only_target":[1,63],"ons":33,"onto":[11,53,77,78,93],"onward":77,"ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo":79,"oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo":79,"op":[18,73,77,78,79,82,84,85,87],"open":[0,3,51,71,73,74,76,82,85,86,90,95],"oper":[2,4,14,18,24,37,39,40,46,47,48,60,61,73,74,76,77,78,81,82,84,85,86,87],"oppos":63,"opposite_of_grad_object":14,"optic":97,"optim":[1,18,74,82,85,86,93,95],"optimis":[11,63,64,72,73,74,78,82,85,86],"optimise_basis_vector":11,"optimise_initial_basis_vector":53,"option":[3,4,6,7,11,15,18,33,34,38,39,40,44,45,46,47,50,51,52,53,54,55,57,59,60,61,62,63,64,66,67,68,69,70,72,74,76,77,81,82,83,84,85,86,87,88,92,96],"optionpars":[32,33],"orang":73,"order":[1,4,9,11,14,15,23,33,36,38,52,53,54,55,59,60,63,64,74,78,81,82,83,85,86,87],"org":[11,18,47,48,53,59,60,75,82,87],"organ":[73,87],"organis":[76,99],"orient":[11,35,39,41,51,53,54,57,58,59,60,62,72,73,75,81,82,85,86,87,95,96,97],"orientation_decomposit":[57,62],"origin":[2,3,4,23,38,46,52,53,64,66,72,74,75,76,78,79,82,83,85,86,94],"origin_toler":[23,24],"orthogon":[2,35,53,59,60],"orthonorm":2,"orthorhomb":[73,75,77,78],"orvil":95,"osc_rang":15,"osc_start":29,"osc_width":29,"oscil":[1,3,12,15,29,38,52,53,59,60,63,75,77,82,85],"other":[2,4,7,14,22,23,25,38,40,42,47,53,54,59,60,63,64,74,75,76,77,78,79,81,82,83,85,86,89,91,92,96,97],"other_crystal_model":11,"otherwis":[14,21,46,47,50,51,53,59,60,64,74,75,81,82,85,86,91],"our":[0,2,4,74,81,82,83,85,86,87,92,98],"out":[4,7,9,14,22,33,38,44,46,47,50,51,53,59,60,73,74,75,78,81,82,83,85,86,91],"out_beam_plan":[53,59,60],"out_spindle_plan":[53,59,60,73,75],"outer":[43,48,72,81,87],"outgo":1,"outlier":[1,14,15,40,53,54,59,60,63,72,73,76,81,82,83,84,85,86],"outlier_detector":14,"outlier_in_sc":15,"outlier_index_arrai":15,"outlier_prob":[41,51,54,58],"outlier_reject":[18,19,63,72],"outlier_zmax":[63,86],"outlierrejectionbas":15,"outlin":[75,78,82,85],"outofsequencefil":75,"output":[1,3,6,7,14,33,34,35,36,37,38,40,41,42,43,44,45,46,47,50,51,52,53,54,55,57,58,59,60,61,62,63,64,65,66,69,70,72,73,74,75,76,78,81,82,83,84,85,86,96],"output_clust":72,"output_unintegrated_reflect":54,"outreach":93,"outright":78,"outset":76,"outsid":[2,14,38,66],"outward":[76,78],"over":[0,1,11,16,18,40,52,53,59,60,69,72,73,74,76,81,82,85,86,95],"overal":[18,40,41,44,51,53,54,58,59,60,72,74,75,76,78,79,81,82,83,84,85,86,87,96],"overbias":63,"overinfl":1,"overlai":74,"overlaid":51,"overlap":[46,53,74,82,85,86,87],"overlaps_bord":[11,53],"overlaps_filt":54,"overload":[14,74,79,81,82,84,85],"overparameteris":1,"overrid":[4,14,18,41,43,45,47,51,52,53,54,58,59,60,66,72,75,81,83],"overridden":[14,52],"overview":1,"overwrit":[23,25,38,52,81],"overwrite_existing_model":63,"overwrite_from_phil":23,"overwritten":74,"owada":95,"owen":95,"own":[0,4,53,59,60,63,74,75,76,83],"owner":91,"oxford":2,"oxid":95,"p":[0,2,3,11,18,40,48,69,70,73,74,75,76,77,78,79,81,82,83,84,85,86,87,95,96],"p1":[18,22,53,73,74,76,82,85,96],"p1_model":83,"p2":[73,82,85],"p21":[73,85],"p21212":73,"p212121":73,"p22121":84,"p222":[73,84,87],"p2221":73,"p4":[76,81,96],"p43212":[53,76],"p4p":[70,76,87],"p6m":81,"p6m_60_panel":81,"p_cc_given_":18,"p_cc_given_not_":18,"p_s_given_cc":18,"paciorek":2,"packag":[0,2,4,9,89,90,93,95,97],"packed_u_accessor":14,"pad":[17,23,41,45,51,54,81],"page":[11,18,48,53,64,73,74,78,79],"pai":[74,76,86],"pair":[1,2,14,18,23,34,40,43,48,53,55,63,64,66,72,73,75,76,78,82,85],"pairwis":[11,39,40,72,76],"palatinu":95,"palei":[0,93,95],"panel":[3,14,23,38,45,46,47,50,51,52,53,54,55,59,60,73,74,75,76,81,82,85,86],"panel_param":23,"paper":[74,75],"parallax":[47,50,51,52],"parallax_correct":52,"parallaxcorrectedpxmmstrategi":[3,82,85],"parallel":[1,2,16,24,35,38,48,81,82,83,85,86,95,97],"parallel_map":83,"parallelepip":[53,59,60],"param":[4,6,11,12,14,15,16,18,21,22,23,25,26,29,30,31,33,54,83],"param_report":14,"paramet":[1,2,4,11,12,14,15,16,17,18,19,21,22,23,24,25,26,29,30,31,33,73,74,75,81,82,83,84,85,86,87,93,96],"parameter_correlation_plot":14,"parameter_esd":4,"parameter_t":59,"parameter_valu":63,"parameter_vector_norm":14,"parameteris":[1,2,14,15,53,59,60,73,74,75,81,82,83,85,96],"parameterreport":14,"parameters_dict":[4,15],"parametr":98,"paramt":93,"pareja":95,"parent":[75,86],"parenthes":46,"pari":11,"park":95,"parkhurst":[0,11,75,89,95,98],"pars":[4,6,33],"parse_arg":[6,33],"parse_known_arg":33,"parser":[6,33],"part":[1,2,14,47,53,59,60,73,74,80,81,82,83,85,86,93,96],"parti":[0,9],"partial":[1,3,18,40,44,46,53,59,60,63,69,70,72,74,77,81,82,84,85,95],"partial_data":26,"partial_set":26,"partiality_cutoff":[44,63,72,82,85],"partiality_threshold":[1,33,40,44,69,70],"particular":[2,4,26,47,53,59,60,74,76,86,91,96],"particularli":[47,74,75,78,83,86,87,96],"pascal":95,"pass":[6,7,14,18,23,44,45,46,49,51,52,63,74,76,77,81,82,83,84,85,87],"passag":35,"past":[38,54,74,81],"pastor":95,"patch":7,"paterson":95,"path":[1,4,7,26,34,35,36,37,40,43,44,45,47,48,49,50,51,52,53,54,55,59,60,61,62,63,64,67,68,69,72,74,81,83,90],"pathlib":4,"pathologi":72,"pattern":[37,73,75,77,78,81,82,83,85,95,97],"patterson":[18,40,73,76,82,84,85,86,95],"patterson_group":18,"paus":78,"pb":[47,54,95],"pcm":82,"pd":95,"pdb":[2,40,44,51,61,63,72,74,77,82],"pdb_version":44,"pdf":[18,53,57,59,60,71],"peachi":25,"peak":[11,47,51,53,74,82,84,85,86,94],"peak_search":53,"peak_volume_cutoff":[11,53],"peakcentroiddistancefilt":[16,19],"peakfind":47,"pearson":18,"pearson_correlation_coeffici":18,"peculiar":75,"pedest":[23,26,52,82,85],"penros":14,"peptid":95,"per":[1,14,15,24,35,36,38,40,41,43,47,51,53,54,58,59,60,63,67,72,73,74,76,79,82,83,84,85,86,92,96],"per_degre":[41,51,54,58],"per_imag":[14,64,67],"per_image_statist":47,"per_width":14,"percent":[33,53,77],"percent_bandwidth":53,"percentag":[33,54,63,64,72],"percentil":[11,53],"perfectli":35,"perform":[0,2,6,9,11,14,15,18,37,40,41,43,44,53,54,56,59,60,63,68,72,73,74,78,81,82,83,84,85,86,87,89,93,96],"perhap":[1,44,78],"period":[4,11,82,85,86],"perl":83,"permiss":[7,54,91],"permit":91,"pernici":78,"perpendicular":[34,68,76],"perraki":97,"perspect":[87,97],"pet":44,"peter":95,"petrov":0,"pflugrath":[0,97],"pfuetzner":95,"ph":95,"pham":95,"pharmaceut":[73,95],"phase":[11,73,77,95],"phaser":73,"phenix":72,"phi":[2,14,22,25,52,53,59,60,63,68,75,78,81,82,83,85,86],"phi_angl":68,"phic":[81,82,83,85],"phil":[0,3,4,6,7,11,12,14,15,18,21,23,25,29,31,33,51,54,63,74,75,83,98],"phil_help":11,"phil_scop":[4,6,11,15,83],"philcommandpars":[32,33],"philo":95,"philosophi":0,"phio":[81,82,83,85],"photon":[0,74,95,97],"photosynthet":95,"photosystem":95,"physic":[1,2,4,15,35,63,72,82,85,86,87,95,97],"physicalscalingmodel":15,"pick":[74,75,77,86],"pickl":[11,16,24,38,47,51,75],"pictur":73,"pierr":83,"pigment":95,"pilatu":[4,48,78,81,82,85,86],"pim":[76,84],"pink":[11,82,85],"pink_index":53,"pinkindex":11,"pipelin":[0,77,79,82,85,95],"pixel":[2,3,16,23,31,36,41,42,45,47,50,51,52,53,54,59,60,62,64,73,74,78,79,81,82,84,85,86,89,95,96,97],"pixel_label":16,"pixel_list_to_reflection_t":[16,19],"pixel_list_to_shoebox":[16,19],"pixel_s":[3,23,52,74,82,85],"pixellistlabel":16,"pixels1":36,"pixels2":36,"pixels_per_bin":62,"pj":95,"pkg":90,"pkg_resourc":4,"pkg_util":4,"place":[14,24,34,44,52,73,75,77,81,82,85],"placement":0,"plai":[74,82,85],"plan":94,"plane":[2,21,34,53,54,59,60,68,74,75,87],"plane_norm":68,"plate":[35,76,82,83,85,86],"platform":90,"platon":73,"plausibl":[82,85],"pleas":[4,9,63,72,77,78,79,80,81,83,84,85,86,87,89,93],"plenti":81,"plop":73,"plot":[1,12,15,31,57,59,62,63,64,67,68,70,73,74,76,81,82,83,84,85,86,96],"plot_centroid_analysi":[53,59,60],"plot_displac":11,"plot_histogram":11,"plot_model_compon":15,"plot_scaling_model":15,"plot_scan_varying_model":[71,74],"plot_search_scop":64,"plotli":15,"plu":[3,14,15,30,82,85,86],"plug":[73,75],"plugin":4,"pmatrix":2,"pmc":[73,74,75,95],"pmc10161776":95,"pmc10191843":95,"pmc11363319":95,"pmc11462730":95,"pmc11700371":95,"pmc3382516":95,"pmc3448510":95,"pmc3689530":95,"pmc3732582":95,"pmc4008696":95,"pmc4052861":95,"pmc4052878":95,"pmc4070675":95,"pmc4119952":95,"pmc4151126":95,"pmc4156696":95,"pmc4188007":95,"pmc4248568":95,"pmc4257623":95,"pmc4260607":95,"pmc4273327":95,"pmc4321488":95,"pmc4321489":95,"pmc4344359":95,"pmc4397907":95,"pmc4403592":95,"pmc4461207":95,"pmc4607316":95,"pmc4721965":95,"pmc4791177":95,"pmc4822564":95,"pmc5139990":95,"pmc5161637":95,"pmc5201176":95,"pmc5619854":95,"pmc5754760":95,"pmc5930348":95,"pmc5947772":95,"pmc6096487":[75,95],"pmc6130462":95,"pmc6450062":95,"pmc6485242":95,"pmc6834081":95,"pmc7137103":95,"pmc7417479":95,"pmc7615503":95,"pmc7737759":[73,95],"pmc8110528":74,"pmc8313502":[73,95],"pmc8740827":95,"pmc8770144":95,"pmc9159281":95,"pmid":[73,74,75,95],"png":[6,11,45,57,67,68,70,76,81,83],"point":[2,3,7,11,14,18,38,40,44,53,54,65,73,74,75,76,77,78,81,82,83,84,85,86,87,92],"pointer":26,"pointgroup":53,"pointless":[18,40,44,69,75,77,85],"pointless_combin":75,"pointless_reindex_":75,"poisson":[42,78,82,85,86],"poitevin":95,"pokeri":6,"polar":[21,38,52,82,85,95],"polarization_fract":[3,21,38,52],"polarization_fraction_toler":24,"polarization_norm":[3,21,38,52],"polarization_normal_toler":24,"polarization_plane_norm":21,"polici":14,"polish":86,"polychromat":[11,52,53,95],"polychromaticbeam":21,"polygon":[47,50,51],"polyhedrin":95,"polynomi":[43,72],"poon":[0,53,59,60],"poor":[75,77,80,81,82,83,85,86],"poorer":1,"poorli":[1,47,53,59,60,73,74,76,86],"pop":86,"poppl":95,"popul":[15,26,33,96],"port":49,"posit":[0,1,2,3,11,14,15,33,47,53,54,59,60,63,64,66,69,72,73,74,75,76,78,79,81,82,84,85,86,87],"posix":75,"possibl":[0,1,2,4,11,18,33,34,40,53,56,59,60,69,73,74,75,76,77,78,79,82,83,84,85,86,87,91,93],"possibli":[14,18,37,76,77],"post":[12,82,85,86,89,95],"potenti":[14,53,59,60,61,72,73,76,82,85],"pothineni":95,"potter":[73,95],"powder":[45,46,47,50,51,74,75,81,82,84,85],"powder_arc":51,"powel":[0,98],"poweleit":[73,95],"power":[11,53,76,82,85],"pp":0,"pr":74,"practic":[2,14,73,74,77,82,85,86,88],"pre":[1,12,82,85,86],"preced":14,"precis":[44,82,85],"pred_param":14,"predict":[3,11,14,16,17,40,41,44,51,53,54,59,60,71,74,75,81,82,83,84,85,86],"predict_for_free_reflect":14,"predict_for_index":14,"predict_for_reflection_t":14,"predict_reflect":51,"prediction_parameteris":14,"predictionparamet":14,"predictionparameteris":14,"predictor":[14,17],"prefer":[9,18,40,47,60,69,72,74,76,81,82,83,85,86],"prefilt":15,"prefix":[7,12,44,45,47,53,59,60,83,90],"preliminari":72,"prepar":[7,14,63,73,76,79,83,87],"prepare_for_step":14,"preprocess":[47,51,82,85],"prerequisit":9,"preselect":[82,85],"presenc":[18,40,77,87,95],"present":[0,14,15,18,33,40,44,46,53,59,60,61,66,71,72,76,77,78,81,82,84,85,86,87,89,99],"preserve_ord":83,"press":[2,78,86],"pressur":35,"presum":[23,74],"pretend":4,"pretti":[18,78,86],"preview":[82,85,86],"previou":[63,75,76,81,82,85,86],"previous":[15,82,85],"prf":[3,40,54,74,81,82,84,85],"primari":[25,33,34,74],"primarili":[11,44,53,82,85,86],"prime":[0,2],"primit":[11,53,60,73,77,78,82,85,86,87],"princip":[14,40,76,93],"principl":[11,21,34],"print":[6,7,12,14,18,33,46,47,57,60,64,65,74,78,82,83,85,86],"print_exp_rmsd_t":14,"print_funct":4,"print_help":6,"print_out_of_sample_rmsd_t":14,"print_panel_rmsd_t":14,"print_stats_on_match":14,"print_step_t":14,"print_tim":33,"printabl":71,"printf":76,"prior":[2,11,54,74,82,85,86,87,91],"prioriti":52,"privat":[9,14],"probabl":[1,11,18,40,41,51,53,54,58,59,60,73,76,82,84,85],"probe":[21,52,82,85],"problem":[0,14,74,77,78,79,82,83,85,86,92],"problemat":14,"proc":[74,75,95],"proce":[53,59,60,76,78,82,84,85,86,87,92],"procedur":[11,40,72,74,82,83,85,86],"proceed":[0,11,74,76,77],"process":[0,1,3,7,12,14,16,31,38,40,41,44,47,48,51,52,53,54,58,59,60,63,71,72,75,77,78,79,80,81,82,84,87,88,89,93,95,97],"process_includ":6,"process_sequ":83,"process_teha":83,"processor":[12,14,16,48,54,72,82,83,85,86],"processor2d":[12,19],"processor3d":[12,19],"processorclass":12,"processorflat3d":[12,19],"processorsingle2d":[12,19],"processorstil":[12,19],"procur":91,"produc":[7,38,44,53,54,59,60,66,74,75,77,78,81,82,83,85,86,96],"product":[2,11,91,93],"product_nam":33,"product_specific_finalize_instal":33,"profil":[1,3,12,24,27,31,32,35,40,41,44,47,51,54,58,63,64,72,74,77,78,81,82,83,84,85,86,93,94],"profile_fitt":12,"profile_model":[3,4,19,32],"profile_model_report":12,"profile_validation_report":12,"profilemodelfactori":[27,28],"profilemodellerexecutor":[12,19],"profilevalidatorexecutor":[12,19],"profit":91,"program":[1,3,7,8,34,35,36,37,40,41,42,44,46,47,50,51,52,53,54,55,58,60,61,62,63,69,72,73,74,77,78,79,82,83,84,85,86,87,93,96,99],"progress":[0,18,33,84,93,94],"progressbar":[32,33],"progressbartim":[32,33],"prohibit":1,"project":[0,2,11,44,45,51,63,64,68,76,79,83,84,89,93,95,97,98],"project_nam":[33,44,63],"project_root":48,"project_src":48,"promot":91,"prompt":74,"proper":[17,33,73],"properli":[7,74,75,77,78,83],"properti":[1,2,11,14,15,18,25,26,29,33,35,47,95],"proport":74,"propos":[82,85,86],"prospect":97,"proteas":80,"protein":[63,73,74,75,82,83,95],"protocol":[75,83],"proton":95,"prototyp":0,"provid":[0,1,4,7,11,14,15,18,23,24,33,36,38,40,43,47,50,51,52,53,54,61,63,66,69,70,72,73,74,75,76,77,78,81,82,83,85,86,90,91,93,96,97],"proxim":53,"prudent":[74,86],"pseudo":77,"pseudocentr":78,"pseudoinvers":14,"psi":[2,14],"psi_i":2,"psi_x":2,"psi_z":2,"pt":[73,95],"public":[0,14,74,75,89],"publish":[0,74,82],"pull":[4,86],"pure":[2,14],"purpos":[59,74,77,81,82,83,85,86,91],"push":74,"put":[7,53,74,78],"pv":95,"pwd":75,"px":[3,47,50,51,52,73,74,78,81,82,83,84,85],"px_mm":23,"px_mm_strategi":3,"px_sz":[53,59,60],"py":[4,9,73,75,83],"python":[0,3,4,7,9,22,23,24,25,26,64,79,83,93,95],"python2":79,"pytorch":11,"q":[84,95],"q1":[81,82,83,85],"q3":[81,82,83,85],"qe":3,"quad":[53,75],"quadrat":63,"qualiti":[0,1,45,48,49,72,73,74,78,81,82,84,85,86,95,97],"quantil":[53,59,60],"quantiti":6,"quantum":3,"quarter":[81,86],"quasi":[18,40,69,72,94],"quasi_random":[1,63,72],"queri":14,"question":[76,78,80],"quick":[1,49,63,74,81,83],"quick_pars":33,"quicker":81,"quit":[11,21,44,53,73,74,75,78],"r":[0,1,2,6,11,15,18,35,40,43,47,50,51,63,69,72,73,76,77,84,92,95],"r2":95,"r24":93,"r24gm154040":[0,89,93],"r_":[2,18,76],"r_0":2,"r_anom":[73,82,85],"r_free_arrai":33,"r_free_flag":72,"r_mea":[73,82,84,85],"r_mrg":[73,82,84,85],"r_pim":[73,82,84,85],"ra":95,"rad":[3,14,53,59,60],"radial":[11,47],"radial_profil":47,"radialaverag":[10,19],"radian":[11,53,54],"radiat":[1,72,73,74,78,81,82,85,86,95],"radic":95,"radiu":[53,64],"rahaman":74,"rai":[0,2,11,22,33,35,52,73,74,78,82,85,89,94,95,97],"rainbow":[45,51],"rais":[15,52,53,59,60],"ram":81,"ran":[76,83],"random":[14,38,53,54,59,60,63,64,72,81],"random_se":[53,54,59,60],"randomli":[63,72,82,85,97],"rang":[1,15,16,26,47,50,51,52,53,54,59,60,63,64,66,69,72,74,79,82,83,84,85,86],"rank":40,"rapid":[0,96,97],"rapidli":76,"raster":[48,76],"rate":[81,83,86,97],"rather":[1,2,7,63,74,75,76,78,81,82,83,85,86,87,97],"ratio":[14,40,76],"raw":[3,9,44,45,47,48,53,55,65,73,75,82,85,86],"rawdata":48,"rawdescriptionhelpformatt":33,"rb":95,"re":[16,34,48,60,61,72,75,76,83,84,95],"reach":[14,53,59,60,97],"read":[1,2,3,4,5,23,24,25,26,29,33,40,55,73,74,78,82,83,84,85,86,95],"read_experi":[6,33],"read_experiments_from_imag":33,"read_fil":33,"read_reflect":[6,33],"readabl":3,"reader":[26,32,33,71,74,78],"readi":[7,44,75,83,86],"readthedoc":64,"real":[2,4,11,76,77,78,81,82,83,85,86,95,96],"real_space_a":[3,22,30],"real_space_b":[3,22,30],"real_space_c":[3,22,30],"real_space_grid_search":[4,11,53,86,96],"realist":76,"realiti":83,"realli":[73,76,81,83],"realspacegridsearch":11,"reason":[1,2,53,59,60,73,74,75,76,77,78,82,83,84,85,87],"reason_for_termin":14,"rebuild":77,"recent":[33,79,89,97],"receptor":74,"reciproc":[1,2,3,4,11,14,18,22,31,34,40,41,44,51,53,54,58,72,74,77,78,82,85,86,87],"reciprocal_lattice_point":11,"reciprocal_lattice_vector":[4,11],"reciprocal_lattice_view":[74,76,77,78,81,82,85,86,87],"reciprocal_spac":[41,51,54,58],"reciprocal_space_grid":53,"recognis":[24,74,78],"recombin":92,"recommend":[1,3,7,53,59,60,63,73,74,75,82,84,85],"reconcil":2,"reconstruct":11,"record":[2,4,14,15,44,53,59,60,73,74,76,77,78,79,81,82,83,84,85,87],"record_intensity_combination_imid":15,"recov":35,"recreat":75,"rectangl":[47,50,51,75],"rectangular":14,"recycle_unindexed_reflections_cutoff":53,"red":[45,73,74,82,85,86],"redefin":2,"redistribut":91,"reduc":[1,2,14,15,35,40,45,47,51,53,59,60,66,72,73,76,82,83,85,86,87],"reduct":[14,53,77,80,82,85,86,97],"reductas":95,"redund":84,"redundant_comput":53,"ree":0,"ref":[10,43,72],"refactor":93,"refelct":63,"refer":[2,8,14,18,21,23,25,29,37,38,40,41,43,51,52,54,57,58,61,62,63,66,71,72,75,81,82,85,86,88,96],"reference_from_experi":[38,81,83,92],"reference_geometri":[52,75],"reference_miller_set":18,"reference_model":[40,61,63],"reference_profil":54,"reference_spot":46,"refin":[1,3,4,11,15,18,19,32,38,41,44,46,51,53,54,57,58,60,62,63,70,71,72,76,77,78,79,80,88,95,96,98],"refine_all_candid":53,"refine_bravais_set":[71,73,74,75,77,78,82,84,85,86,87],"refine_candidates_with_known_symmetri":53,"refine_shel":53,"refined_cel":[70,87],"refined_experi":75,"refined_lev0":81,"refined_lev1":81,"refinement_ord":63,"refinement_param":11,"refinement_protocol":53,"refinerfactori":[14,19],"refineri":[14,19,53,59,60,63],"refl":[1,3,6,35,37,38,40,41,43,44,46,47,51,53,54,56,58,59,60,61,62,63,64,65,66,67,69,70,72,73,74,76,77,78,79,81,82,83,84,85,87,92,96],"reflect":[2,4,6,10,11,12,14,15,16,17,18,31,33,35,37,38,40,41,43,44,46,47,51,53,54,56,58,59,60,61,63,64,65,66,68,69,70,72,73,74,75,77,78,79,81,82,83,84,85,86,87,88,96,98],"reflection_file_object_list":33,"reflection_manag":14,"reflection_predictor":17,"reflection_select":[1,63,72],"reflection_t":[3,4,11,12,14,15,16,33,83],"reflection_table_selector":54,"reflectionmanag":[12,14,19],"reflectionmanagerfactori":[14,19],"reflectionpredictor":[17,19],"reflections_":[87,92],"reflections_0":[38,40,87],"reflections_1":[38,40,87],"reflections_2":[40,87],"reflections_3":[40,87],"reflections_after_outlier_reject":14,"reflections_and_experiments_from_fil":[32,33],"reflections_filenam":[38,66],"reflections_per_bin":[43,72],"reflections_per_degre":[41,51,53,54,58,59,60],"refman":14,"refresh":4,"regard":[74,86],"regardless":1,"regev":95,"region":[2,11,16,46,47,56,64,74,75,77,81,86],"region_of_interest":[16,47],"regist":4,"registri":4,"regress":93,"regular":[1,47,54,63,66,69,72,76,78,81,84,96],"regular_grid":[41,51,54,58],"rehanek":95,"reindex":[18,24,40,53,60,71,72,73,74,75,76,77,78,82,84,85,86,87],"reindex_to_refer":18,"reintegr":54,"reinvent":0,"reject":[1,14,15,43,46,47,50,51,53,54,59,60,63,72,73,81,82,83,84,85,86],"reject_fract":46,"reject_outli":15,"rejectiob":15,"rejector":[53,54,59,60],"rel":[1,11,15,18,47,53,57,62,63,72,76,81,82,83,85,86,87],"relat":[1,2,14,37,39,53,59,60,73,76,77,78,82,83,85,86],"relationship":[2,3,52],"relative_b_correct":63,"relative_length_toler":[11,18,40,53,69,72],"relative_to_complete_set":72,"relative_to_static_orient":[57,62],"releas":7,"relev":[14,43,44,82,85,86,87],"reli":92,"reliabl":[63,73,82,85,87],"relocat":62,"relp":[53,59,60],"remain":[0,2,11,14,38,53,54,59,60,74,75,78,82,84,85,86],"remap":16,"rememb":[73,78,81,83],"remind":[1,81],"remot":[62,79],"remov":[1,4,35,40,50,53,54,59,60,63,66,70,72,73,74,76,82,83,84,85,86,92],"remove_on_experiment_identifi":24,"remove_profile_fitting_failur":72,"remove_sources_default":33,"renumb":33,"reopen":24,"repeat":[38,47,63,73,74,75,81,83,86,96],"repeatedli":76,"repetit":63,"replac":[9,24,38,52,73,74,75,77,83],"replot":[59,70],"report":[1,12,14,40,42,48,54,63,67,69,70,71,74,76,78,84,86,89,96],"report_progress":14,"repositori":[4,9,53,59,60,75],"repredict_onli":53,"repres":[2,12,40,44,52,81,82,85,86,93],"represent":[2,15,18,52],"reprint":[73,74,75,95],"reprocess":[73,85,86],"reproduc":[74,75,77,82,83,85,86,91],"request":[4,14,26,43,48,53,59,60,78,81,89],"requir":[4,7,11,14,15,18,40,44,52,53,54,59,60,62,64,72,73,74,75,77,78,79,80,81,82,83,84,85,86,87,89,92,93,95,97],"rerun":[83,84,87],"rescal":[72,82,85],"rescale_after_resolution_cutoff":72,"rescu":83,"research":[0,89,91,93],"reserv":91,"reset":[14,63,73],"reset_accepted_reflect":14,"reset_error_model":63,"reset_scan_point":25,"residu":[14,53,59,60,76,81,82,85,86],"resiz":86,"resolut":[1,11,17,18,37,38,40,41,43,44,45,46,47,48,49,50,51,53,54,60,63,67,72,73,74,75,76,77,78,79,81,82,83,84,85,86,87,95],"resolution_analysi":67,"resolution_depend":63,"resolution_filter_from_arrai":[18,19],"resolution_filter_from_reflections_experi":[18,19],"resolution_r":45,"resolution_rang":[47,50,51],"resolv":[72,74,76,82,85,86],"resolve_indexing_ambigu":72,"resourc":[1,89],"respect":[18,35,39,63,76,79],"respons":[47,49,74],"rest":[1,11,40,74],"restart":14,"restrain":[1,53,59,60,63,75],"restraint":[14,53,59,60,63,74,75,83,87],"restraints_param":14,"restraints_parameteris":14,"restrict":[44,53,59,60,83],"result":[1,2,11,14,15,18,35,37,38,39,40,42,43,44,51,53,57,59,60,63,64,66,67,74,75,77,78,81,82,83,84,85,87,92,96],"retain":[38,44,54,76,91],"retrospect":97,"return":[1,4,6,11,12,14,15,16,17,18,21,22,23,24,25,26,29,30,31,33,49,53,59,60,74,83,86],"return_unhandl":33,"reus":[0,94],"reusabl":2,"reveal":[74,77,95],"revers":[4,11,25,44,78],"revis":[86,95],"revisit":76,"reweight":63,"rewrit":81,"rey":95,"rf":95,"rg":95,"rh":95,"rho":35,"ribonucleotid":95,"rice":[73,95],"richard":0,"rigaku":23,"right":[2,4,35,73,74,78,81,83,91],"rigid":[53,59,60,81],"rigor":74,"rij":[18,40,72],"ring":[44,45,46,47,49,50,51,53,54,74,75,81,82,84,85,95],"riordan":[0,95],"risk":76,"rivera":95,"rj":[89,95],"rl":95,"rlp":[3,44,53],"rlp_mosaic":[41,51,54,58],"rmat":33,"rmea":[63,74,76,79,82,85,86,87],"rmerg":[43,72,74,76,79,82,85,86,87],"rmsd":[11,14,53,59,60,63,73,74,77,78,79,81,82,83,84,85,86,96],"rmsd_cutoff":[11,53,59,60],"rmsd_deltapsi":14,"rmsd_i":[82,85],"rmsd_min_px":53,"rmsd_name":14,"rmsd_phi":[14,81,82,83,84,85,86],"rmsd_target_mm":53,"rmsd_toler":63,"rmsd_unit":14,"rmsd_wavelength":14,"rmsd_weight":[11,53],"rmsd_x":[14,73,74,78,81,82,83,84,85,86],"rmsd_xy":[82,85],"rmsd_y":[14,73,74,78,81,82,83,84,85,86],"rmsd_z":[73,74,78,81,82,83,84,85],"rmsds_for_experi":14,"rmsds_for_panel":14,"rmsds_for_reflection_t":14,"robert":0,"robinson":95,"robust":[53,54,59,60,76,95],"rock":74,"rodriguez":95,"roi":47,"roo":95,"room":[83,95],"root":[4,53,59,60,74],"rooyen":95,"rosenberg":95,"rossmann":11,"rotat":[0,1,2,4,6,11,14,22,25,33,34,35,38,39,47,52,53,54,57,59,60,62,63,68,72,73,74,75,76,78,81,82,84,85,86,92,95,96,97],"rotate_around_origin":[23,25],"rotate_cryst":[32,33],"rotation_angle_deg":54,"rotation_axi":[3,25,38],"rotation_axis_toler":[24,25],"rotation_matrix_differ":11,"rotation_scan_manag":14,"rotogram":53,"rotogram_grid_point":53,"rough":78,"rougher":86,"roughli":[11,43],"round":[1,53,63,72,73,74,78,79,82,85],"rousseeuw":[53,59,60],"routin":[1,63,87],"row":14,"rp":95,"rpim":[1,74,76,79,82,85,86,87],"rsmd":[14,83],"rt_mx":18,"rub":2,"rubi":83,"rudzki":95,"rule":[53,59,60,64],"run":[1,4,6,7,9,14,15,16,18,38,40,43,44,48,53,55,59,60,63,73,74,75,76,78,79,81,82,83,84,85,86,87,93,96],"run_lbfg":14,"runtim":[4,75],"runtimeerror":11,"rupp":2,"rw":95,"s0":[6,21,23,43],"s0021889810010782":[53,59,60],"s1":[3,23,41,51,54,58],"s1600576714007626":47,"s1600576724003182":11,"s2053273319015559":11,"s2059798317010348":75,"sacrifici":83,"sad":[44,87,95],"sadab":44,"saeed":0,"sai":[7,53,59,60,78,83,86],"same":[1,2,11,14,23,24,36,44,54,59,61,64,66,70,73,74,75,76,78,81,82,83,85,86,96],"sampl":[2,11,14,18,23,35,52,53,54,59,60,73,74,76,81,82,85,86,87,95],"sample_to_sourc":21,"sample_to_source_dist":[21,52],"sanchez":95,"sandi":95,"sandwich":35,"sangwan":95,"sanishvili":95,"saniti":53,"sar":80,"saracini":95,"satisfi":[81,86],"satur":45,"saturn":23,"sauter":[0,2,11,48,53,59,60,64,89,95,97],"sauter_poon":[53,59,60,83],"save":[3,38,40,41,47,50,52,54,58,63,64,74,75,81,82,83,84,85,86,87,96],"save_average_imag":64,"save_coordin":68,"saw":73,"sawaya":95,"sb":95,"sbgrid":74,"sc":79,"sca":72,"scalar":11,"scale":[2,3,18,19,22,24,32,35,40,43,44,45,48,56,71,72,76,78,79,83,88,94,95],"scale_and_filter_result":63,"scale_compon":4,"scale_correct":1,"scale_interv":[1,63,86],"scale_rang":44,"scalecomponentbas":4,"scaled_unmerg":[43,44,76],"scaler":15,"scaling_model":24,"scaling_model_ext":4,"scaling_opt":63,"scaling_refineri":63,"scalingmodelbas":[4,15],"scan":[2,3,4,6,14,16,17,24,25,26,27,32,38,41,44,47,48,49,51,52,53,54,57,58,59,60,63,65,66,68,69,72,73,74,76,81,82,83,84,85,86,87,92,97],"scan_axi":[25,52],"scan_margin":[14,53,59,60],"scan_rang":[16,47,54],"scan_step":[41,51,54,58],"scan_toler":[24,33],"scan_vari":[41,51,53,54,58,59,60,73,74,75,81,82,83,92],"scanaxi":25,"scanfactori":[27,29],"scanvaryingrefin":[14,19],"scapin":[73,95],"scatter":[1,2,47,53,59,60,63,74,82,85,86,95],"scene":97,"sceptic":78,"schafer":95,"schemat":35,"scheme":[14,63,82,85,86],"schlicht":95,"school":76,"schriber":95,"schuck":95,"schuermann":0,"sci":[73,95],"scienc":[0,33,79,82,89,93,95],"scientif":[0,94],"scientist":[83,93],"scipi":[18,40,72],"scisoft":[33,79,82],"scitbx":[4,6,10,11,12,14,18,22,23,24,25,26,40,72],"scope":[11,12,15,33,37,53],"scope_extract":[14,18,21],"score":[1,11,18,40,53,63,69,73,76,77,79,82,84,85,86,87],"score_by_fraction_index":11,"score_by_rmsd_xi":11,"score_by_volum":11,"score_vector":11,"scorecorrelationcoeffici":[18,19],"scoresubgroup":[18,19],"scoresymmetryel":[18,19],"scratch":[9,79,83,85],"screen":[82,85],"screw":84,"script":[4,6,7,9,33,38,76,83],"scroll":[73,86],"sd":[18,82,85,87],"se":95,"seamless":0,"search":[11,29,37,38,53,59,60,64,74,77,78,83,84,96],"search_beam_posit":[71,78],"search_depth":53,"search_direct":11,"search_vector":11,"second":[1,18,34,73,77,78,82,83,85,86],"secondari":72,"sect":2,"section":[1,3,74,76,77,82,85,86],"see":[1,2,7,9,11,18,47,48,53,54,59,60,63,64,72,73,74,76,77,78,81,82,83,85,86,87,90,96],"seed":[18,40,53,54,59,60,64,69,72],"seed_dataset":18,"seem":[1,44,74,81,83],"seen":[75,81,82,85,86],"seibert":95,"sel":14,"select":[1,6,11,14,15,38,40,41,43,46,51,53,54,58,59,60,63,64,72,74,76,78,82,85,86,87],"select_good_intens":46,"select_on_experiment_identifi":24,"selection_used_for_refin":14,"self":[4,6,12],"sellberg":95,"seltzer":35,"semi":84,"semin":0,"semisynthetic_multilattice_data":84,"semisynthetic_multilattice_data_2":84,"senior":93,"sens":45,"sensibl":[1,76,82,85,86,87],"sensit":[0,11,40],"sensor":[2,23],"sensor_pad":[82,85],"sensor_unknown":3,"sep":95,"separ":[1,14,15,38,40,43,47,53,54,59,60,63,64,70,72,73,74,75,81,82,83,84,85,92],"separate_block":[53,59,60],"separate_experi":[53,59,60],"separate_fil":54,"separate_imag":[53,59,60],"separate_independent_set":59,"separate_panel":[53,59,60],"septemb":99,"sequenc":[2,3,15,16,24,26,30,36,47,52,53,54,59,60,63,66,78,79,81,82,83,84,85,87,96],"sequence_":83,"sequence_00":83,"sequence_01":83,"sequence_02":83,"sequence_03":83,"sequence_04":83,"sequence_08":83,"sequence_09":83,"sequence_11":83,"sequence_12":83,"sequence_13":83,"sequence_14":83,"sequence_16":83,"sequence_17":83,"sequence_19":83,"sequence_20":83,"sequence_21":83,"sequence_22":83,"sequence_23":83,"sequence_24":83,"sequence_25":83,"sequence_26":83,"sequence_27":83,"sequence_28":83,"sequence_29":83,"sequence_31":83,"sequence_32":83,"sequence_33":83,"sequence_35":83,"sequence_38":83,"sequence_39":83,"sequence_40":83,"sequence_41":83,"sequence_42":83,"sequence_43":83,"sequence_44":83,"sequence_45":83,"sequence_46":83,"sequence_47":83,"sequence_48":83,"sequence_50":83,"sequence_53":83,"sequence_54":83,"sequence_55":83,"sequence_57":83,"sequence_58":83,"sequence_59":83,"sequence_60":83,"sequence_61":83,"sequence_62":83,"sequence_63":83,"sequence_64":83,"sequence_65":83,"sequence_66":83,"sequence_67":83,"sequence_68":83,"sequence_69":83,"sequence_70":83,"sequence_71":83,"sequenti":[39,74],"sequestr":0,"seri":[0,11,53,83,97],"serial":[0,4,11,15,24,27,32,53,59,60,74,83,89,95,96,97,99],"serialis":24,"serlial":83,"serv":79,"server":[9,49,71],"servic":[73,91],"session":[9,97],"set":[1,2,3,6,7,11,12,14,15,16,18,26,29,30,33,34,37,38,40,42,43,44,45,46,47,50,51,52,53,54,55,56,58,59,60,61,63,64,65,68,69,72,73,74,75,77,78,81,82,83,84,85,86,87,89,90,92,95,96,97],"set_angl":25,"set_ax":25,"set_beam":26,"set_cholesky_factor":14,"set_detector":26,"set_dimens":18,"set_domain_size_ang":22,"set_domain_size_ang_valu":53,"set_error_model":15,"set_fixed_rot":25,"set_format_class":26,"set_goniomet":26,"set_half_mosaicity_deg":22,"set_last_cel":14,"set_mosa":22,"set_mosaic_half_deg_valu":53,"set_nproc":14,"set_param":26,"set_rotation_axi":25,"set_rotation_axis_datum":25,"set_scaling_model_as_sc":15,"set_scaling_model_as_unsc":15,"set_scan":26,"set_scan_varying_error":[53,59,60],"set_setting_rot":25,"set_setting_rotation_at_scan_point":25,"set_shoebox_background_valu":[10,19],"set_templ":26,"set_valid_image_rang":15,"set_vendor":26,"setting_rot":[38,52],"setting_rotation_matrix":25,"setting_rotation_toler":[24,25],"setup":[4,14,33,90],"setup_index":11,"setup_mu":14,"setuptool":4,"seuffert":95,"seven":75,"sever":[1,9,49,76,77,82,83,85,86],"sfac":73,"sfx":74,"sge":[47,54],"sgtbx":[11,18,22,24,53],"sh":[7,74,90],"shadow":[11,45,47,50,51,52,58,81],"shall":[75,78,84,91],"shape":[50,63,82,85,86,87],"share":[3,10,12,14,23,24,25,26,38,59,63,72,83,92],"shared_ptr":[10,24,26],"shell":[1,7,43,47,72,73,74,75,76,87],"shelx":[44,70,73,87],"shelxd":73,"shelxt":[73,87],"shevela":95,"shi":95,"shift":[14,53,59,60,62,78,81,82,85,86],"shoebox":[3,10,16,38,41,47,51,54,58,63,74,82,85,86,87],"shoebox_memori":12,"shoeboxes_to_reflection_t":[16,19],"shoeman":95,"short":[3,44,49,77,81,83],"short_capt":[40,43,47,52,53,54,59,60,63,69,72],"shortcut":83,"shorter":[11,21,74],"shortest":11,"shorthand":[47,54,63,69,72],"shortli":[82,85],"shot":[53,95],"should":[1,2,4,7,14,15,18,25,38,44,50,54,63,72,73,74,75,76,77,78,81,82,83,84,85,86,87,89,92],"show":[4,22,31,33,40,45,47,51,56,71,73,74,75,76,78,81,82,83,85,86,87,96],"show_all_pix":51,"show_all_reflection_data":65,"show_beam_cent":51,"show_centroid":65,"show_correct":65,"show_ctr_mass":51,"show_diff_phil":[6,33],"show_experi":11,"show_flag":65,"show_hkl":51,"show_ice_r":51,"show_identifi":65,"show_index":51,"show_integr":51,"show_intens":65,"show_mail_handle_error":6,"show_mask":[45,51],"show_max_pix":51,"show_miller_indic":51,"show_predict":51,"show_profile_fit":65,"show_raw":65,"show_registri":4,"show_resolution_r":51,"show_rotation_axi":51,"show_scan_vari":[22,65],"show_shared_model":65,"show_shoebox":51,"show_threshold_pix":51,"shown":[3,4,7,52,63,73,82,83,85,86],"shutterless":97,"si":[73,82,84,85],"side":[14,58,74,81],"siebert":95,"sierecki":74,"sierra":95,"sig":[38,40,44,82,84,85],"sig_":14,"sig_min":14,"sigf":84,"sigi":[38,43,54,63,72,74,79,81,82,84,85],"sigimean":[84,85],"sigma":[1,18,40,41,51,52,53,54,58,59,60,63,69,72,74,75,76,79,82,84,85,86,87],"sigma_":[45,51],"sigma_b":[41,45,51,54,58],"sigma_background":47,"sigma_cc":18,"sigma_d":[82,85,86],"sigma_diverg":[3,21,52],"sigma_i":[81,82,85,86],"sigma_m":[41,51,54,58,82,85,86],"sigma_m_algorithm":[41,51,54,58],"sigma_phi_deg":53,"sigma_strong":[47,75],"sigma_tau":[43,72],"sign":[14,73,82,85,86],"signal":[1,74,95],"signal_strength":48,"signatur":[10,12,14,22,23,24,25,26],"signific":[35,38,43,47,54,63,69,72,75,81,82,83,85,86],"significance_filt":[38,54],"significance_level":69,"significantli":[72,73,82,85,86,96],"sikorski":95,"silver":[51,97],"similar":[1,4,15,18,40,47,52,53,74,76,77,82,83,84,85,86,96],"similarli":84,"simon":95,"simpl":[1,4,14,15,21,23,24,31,33,47,50,51,53,54,63,72,81,83,86],"simple1":[41,51,54,58],"simple1angular1":[41,51,54,58],"simple1angular3":[41,51,54,58],"simple6":[41,51,54,58],"simple6angular1":[41,51,54,58],"simple_background_ext":31,"simple_centroid_ext":31,"simple_data_filenam":53,"simple_direct":21,"simplebackgroundext":[31,32],"simplecentroidext":[31,32],"simplelbfg":[14,19,53,59,60,63],"simplenormdevoutlierreject":15,"simpli":[1,2,7,14,35,40,82,83,85,86,92,93],"simplic":96,"simplifi":[2,21],"simul":95,"simultan":[74,83,86,95],"sin":2,"sinc":[2,11,35,53,54,82,85,86,87],"singl":[1,2,4,11,12,14,15,16,18,24,25,29,38,40,41,45,47,48,51,52,53,54,55,58,59,60,63,64,66,69,70,72,74,76,77,81,82,83,84,85,86,87,92,93,95],"single_axi":25,"single_axis_goniometer_from_phil":25,"single_axis_revers":[4,25],"single_fil":29,"single_file_indic":26,"singleton":40,"singular":14,"sirohiw":95,"sit":78,"site":[7,75,93],"situ":[76,83],"situat":[14,74,81,82,83,85],"six":[75,87],"size":[1,4,11,18,23,26,35,38,39,41,42,43,44,45,47,50,51,52,53,54,55,57,58,59,60,61,62,63,64,66,68,72,73,74,81,82,84,85,86,96],"size_max":52,"size_min":52,"size_t":[12,15,16,24,26],"sj":74,"sj\u00f6berg":95,"skinner":95,"skip":[74,96],"skip_deriv":14,"slice":[53,64,66,74,97],"slice_sequ":71,"slide":0,"slider":[73,82,85],"slightli":[29,74,81,82,83,85,86],"slippag":2,"slope":[74,76,79,82,85,86,87],"slow":[1,23,38,44,47,50,51,52,63,72,73,74,75],"slow_axi":[3,23,38,52,75,82,85],"slow_axis_toler":[23,24],"slow_direct":23,"slow_fast_beam_centr":52,"sm":95,"small":[1,2,11,53,59,60,76,77,78,80,81,82,85,86,95],"smaller":[18,40,53,55,59,60,66,69,72,73,74],"smallest":[14,53,59,60],"smart_sigma":54,"smeet":0,"smith":95,"smooth":[1,64,82,83,85,86],"smoother":[15,53,59,60,73,75,86],"smoothli":[1,74,82,85,86,87,92],"smtbx":33,"smv":[73,74],"snapshot":[11,74,95,97],"snare":95,"snippet":81,"snow":76,"so":[1,2,4,11,14,16,24,26,35,40,44,53,59,60,63,70,72,73,74,75,76,77,78,81,82,83,84,85,86,87],"soc":95,"soft":75,"softwar":[0,2,7,11,75,82,84,85,89,91,94,95,97],"sohnck":87,"sokara":95,"soli":95,"solid":11,"solti":95,"solut":[11,14,40,53,63,73,74,75,76,77,78,79,82,83,84,85,86],"solution_scor":53,"solv":[77,78,82,85,86,87,93],"solvent":73,"some":[1,2,3,4,6,7,9,14,25,33,41,53,59,60,63,73,74,75,76,77,78,81,82,83,85,86,87,92,94],"somehow":76,"someth":[76,78,82,83,85],"sometim":[11,52,73,82,85],"somewhat":[7,83],"somewher":76,"song":95,"sophist":[74,82,83,86],"sorri":92,"sort":[6,33,54,78,83,85],"sort_opt":33,"sorted_":75,"sorted_1":75,"sorted_2":75,"sorted_3":75,"sorted_4":75,"sorted_5":75,"sorted_6":75,"sorted_7":75,"sourc":[0,4,9,11,12,14,15,16,17,18,21,22,23,24,25,26,28,29,30,31,33,35,44,52,78,80,81,82,83,84,85,86,90,91,94,95,99],"source_nam":44,"source_packag":33,"source_short_nam":44,"sourceforg":89,"space":[1,2,4,7,11,14,15,18,22,31,33,37,40,41,43,44,45,46,47,50,51,53,54,58,59,60,61,63,72,73,74,75,77,78,79,81,82,83,84,85,86,87,96],"space_group":[11,18,22,30,33,34,39,40,43,45,46,47,50,51,53,61,69,72,73,74,77,81,82,83,84,85,87,96],"space_group_hall_symbol":3,"space_group_info":11,"space_group_numb":30,"space_group_symbol":22,"spacegroup":[51,75,79],"spallat":94,"spars":[14,18,40,53,59,60,81,95,96],"sparsegradientsmixin":[14,19],"sparselevmar":[53,59,60],"spatial":11,"speaker":0,"special":[2,4,11,51,53,59,60,63,73,74,75,76,86,91],"special_correct":4,"specialcompon":4,"specif":[0,2,4,7,53,54,59,64,70,74,75,76,82,83,85,86,91,93],"specifi":[1,2,11,14,15,33,34,36,38,43,46,47,50,51,52,53,54,59,60,61,63,64,66,68,69,70,72,74,81,83,90,96],"spectral":11,"spectroscopi":95,"spectrum":26,"speed":[0,45,53,54,59,60,73,81,82,85,86,96,97],"spell":76,"spend":77,"sphere":[14,53,59,60,74],"spheric":[1,53,59,60,63,72,87],"spherical_grid":[41,51,54,58],"spherical_relp_model":[53,59,60],"spindl":[14,53,59,60,81,82,85,86],"spinner":33,"spiral":78,"spirit":0,"split":[4,12,14,24,38,47,51,52,53,54,59,60,63,66,77,78,81,82,83,84,85,87,92,96],"split_":83,"split_0":84,"split_00":83,"split_1":84,"split_57":83,"split_experi":[54,81,83,84,87,92],"split_jacobian_into_block":14,"split_json":67,"split_matches_into_block":14,"spot":[4,11,16,35,41,42,44,45,47,49,50,51,53,54,58,59,60,64,67,77,79,81,83,84,92,96],"spot_count":49,"spot_count_no_ic":49,"spot_counts_per_imag":71,"spot_dens":47,"spot_find":[19,32],"spot_predict":[19,32],"spotdensityfilt":[16,19],"spotfind":[16,19,47,48,75,79,82,85,93,95,96],"spotfinderfactori":[16,19],"spread":[22,63,76,78,79],"spring":76,"sqr":6,"sqrt":[2,14,18,40,72,82,85],"squar":[14,53,59,60,74,82,85,86],"src":[4,33],"sriniva":95,"ssh":9,"ssrl_p6":48,"ssx":88,"ssx_index":88,"ssx_integr":88,"stabil":[83,93],"stabilis":75,"stabl":[7,87],"stacei":74,"stack":12,"stack_imag":51,"stack_mod":51,"stadler":0,"staff":[4,89],"stage":[2,35,73,74,75,77,82,85,86,87],"stai":[14,76],"stan":95,"standard":[1,2,15,21,23,25,35,40,47,54,63,70,72,74,75,76,79,81,83,84,87,93,95,96],"standard_error":[18,40,72],"standardis":2,"star":[18,77],"start":[1,2,8,15,18,23,25,33,47,48,52,53,54,59,60,63,64,68,69,72,73,74,75,76,77,78,79,81,82,83,85,86,87,90,98],"stat":[48,63],"state":[2,14,53,59,60,82,85],"static":[11,12,14,16,17,18,21,22,23,24,25,26,28,29,31,41,44,51,53,54,57,58,59,60,62,73,74,81,82,83,86,87],"static_onli":23,"staticmethod":4,"statist":[1,14,42,43,44,47,48,53,59,60,63,65,67,72,73,74,76,77,78,81,82,83,84,85,86,87,93,96],"statisticalweightingstrategi":[14,19],"statu":[3,79],"std":[10,22,23,24,25,26,40,63,72,79],"std_string":[23,24,25],"stdcutoff":[63,72],"stddev":76,"stdin":52,"steadi":86,"steep":[43,85],"stef":0,"steller":[11,53],"step":[9,14,18,40,44,45,53,54,59,60,63,64,70,73,74,75,76,77,78,81,82,83,84,85,86,87,97],"step_backward":14,"step_forward":14,"step_siz":[11,53],"step_threshold":14,"stepanov":95,"stepwis":96,"stereograph":[68,76],"stereographic_project":71,"stevenson":95,"stfc":[89,94],"still":[1,3,9,11,12,14,16,24,52,53,54,59,60,63,73,74,75,76,78,81,82,83,84,85,86,95,96],"stills_index":19,"stills_manag":14,"stills_process":[16,96],"stillsindex":11,"stillsindexerbasisvectorsearch":11,"stillsindexerknownorient":11,"stillsindexerlatticesearch":11,"stillsreflectionmanag":[14,19],"stillsweightingstrategi":[14,19],"stop":[11,15,41,47,49,51,54,58,63,69,72,74,75,82,85],"storag":14,"store":[0,3,4,14,18,48,57,74,75],"str":[4,6,11,15,18,21,22,24,25,26,33,34,36,37,38,40,41,42,44,45,46,47,50,51,52,53,54,57,58,59,60,61,63,64,66,68,69,70,72],"straight":[78,81,82,85,86],"straightforward":[73,76,77,87],"strain":95,"strategi":[11,14,16,47,53,59,60,82,85,95],"streamwrapp":33,"strength":[1,74,76,87,95],"strict":91,"strictli":[82,84,85],"string":[7,12,14,33,43,47,49,53,54,59,60,63,68,69,70,72],"strong":[1,3,16,44,47,49,51,53,54,62,64,67,70,73,74,75,76,77,78,81,82,83,84,85,86,87,96],"strongli":[1,63],"struct":[3,75,89,95],"structur":[0,7,14,24,53,59,60,63,74,75,76,77,78,82,84,85,86,87,89,93,95,97],"struggl":73,"stuart":[11,95,97],"studi":[0,95],"stuff":[12,33],"style":[4,53,72],"stype":23,"sub":[40,46,53,59,60,73,76,77,82,84,85,86,89],"subclass":[4,14,15],"subdirectori":[74,76,85,86],"subgroup":18,"subgroups_t":18,"subject":18,"submiss":93,"submit":[4,83,95],"suboptim":73,"subprocess":4,"subsampl":54,"subsect":75,"subsequ":[9,15,75,77,81,82,85,86,87],"subset":[1,14,38,46,53,54,59,60,63,64,72,76,78,81,82,85,86],"substanti":87,"substitut":[7,91],"substrat":95,"substructur":76,"subtl":77,"subtli":35,"subtract":[31,41,54,73,78,86],"subtract_background":41,"succe":78,"success":[16,18,73,74,75,76,82,83,85,86,96],"successfulli":[75,83],"sudo":90,"suffic":[53,59,60],"suffici":[1,7,40,78,83,84,86],"suffix":[33,40],"sugahara":95,"suggest":[73,74,76,79,81,82,83,84,85,87],"suit":[7,44,48],"suitabl":[1,15,44,53,59,60,63,72,74,75,82,84,85,86,87,96],"sum":[1,3,6,18,29,40,44,51,54,55,63,74,81,82,83,84,85,86],"sum_":55,"summari":[0,12,33,65,76,81,82,83,84,85,86,87,96],"summaris":[3,74,96],"summary_t":18,"summat":[1,35,40,54,63,74,81,82,83,84,85],"super":[4,93],"supercel":81,"supercomput":93,"superpos":77,"suppli":[14,52,53,54,59,60,63,64,75],"support":[0,4,7,11,43,44,45,51,52,53,55,59,60,70,71,79,89],"sure":[9,72,73,74,77,78,86],"surfac":[1,15,35,81,82,85,86,87],"surface_weight":[1,63],"survei":97,"suspect":[77,78],"sutherlin":95,"sutton":[11,95],"suzuki":95,"sv_refin":81,"svn":9,"sweep":[1,15,63,72,76,79,82,83,84,85,87,88,96],"sweep00":76,"sweep1":79,"sweep30":76,"switch":[7,18,76,81,83,84],"sxd":94,"sy":[4,83],"sym":18,"sym_op":18,"sym_op_scor":18,"sym_ops_t":18,"symbol":[2,12,53,84],"symm":[37,73],"symmetr":[1,40,69,73,76,82,84,85,87],"symmetri":[1,11,15,19,32,37,40,44,53,59,60,63,68,70,71,72,75,76,81,83,95],"symmetris":18,"symmetry_bas":[18,19],"symmetryanalysi":[18,19],"symmetryhandl":11,"symop":78,"symop_threshold":37,"synaptotagmin":95,"synchroton":93,"synchrotron":[0,74,78,89,93,94,96,97],"syntax":[1,74],"synthesi":83,"synthet":[35,84],"synuclein":95,"sys_absent_threshold":53,"system":[0,2,7,33,54,74,75,76,79,82,85,95],"system_phil":33,"systemat":[1,40,68,69,72,77,78,79,81,82,85,86],"systematic_abs":69,"s\u00fcdhof":95,"t":[1,2,15,22,23,25,26,29,33,35,38,40,71,73,74,75,76,81,82,83,85,86,89,95],"t0":[82,85],"t1":78,"ta":95,"tab":[71,76,86],"tabl":[1,2,3,4,14,15,16,33,35,38,46,47,54,57,59,60,63,65,74,75,77,78,81,82,83,84,85,86],"tabul":35,"tailor":16,"takanori":0,"take":[4,15,17,18,38,40,46,48,52,53,54,58,59,60,63,69,74,76,77,78,81,82,83,85,86,87,92,95],"taken":[1,35,53,57,59,60,62,75,76,82,83,85,86,87],"tale":78,"talk":0,"tanaka":95,"tandem":97,"tanh":[43,72],"tantalis":97,"tape":54,"tar":[7,48,75,76,78,84,85,86,87,90],"tara":0,"target":[1,11,14,15,18,19,53,59,60,63,70,73,74,81,82,85,86],"target_angl":11,"target_bravais_str":11,"target_cycl":63,"target_model":63,"target_mtz":63,"target_space_group":11,"target_stil":14,"target_symmetri":11,"target_symmetry_primit":11,"target_unit_cel":11,"targetedoutlierreject":15,"targetfactori":[14,19],"tarik":0,"task":[16,54,76,82,83,85,86],"tasklist":83,"tasso":97,"tau":14,"tau2":75,"tau3":75,"tau_2":75,"tau_3":75,"tbc":97,"tc":95,"tchon":0,"tcsh":83,"team":93,"technic":97,"techniqu":97,"technolog":97,"technologi":[0,35],"teha":83,"tell":[74,77,81,83,86,92],"tem":73,"tempel":[77,78],"temperatur":[83,95],"templat":[3,21,22,23,24,25,26,29,33,52,75,79,82,83,85,86,92],"ten":[76,93],"tend":[74,75],"tendenc":75,"term":[1,2,14,53,59,60,63,73,82,85,86,87],"termin":[14,18,53,59,60,63,79,81,90],"termination_param":18,"termination_paramet":18,"terribl":83,"terwillig":95,"test":[1,11,14,15,18,33,37,53,61,63,69,72,75,76,78,83,84,86,87,93],"test_for_termin":14,"test_miller_set":18,"test_objective_increasing_but_not_nref":14,"test_rmsd_converg":14,"tetragon":[76,81],"text":[2,24,33,35,73,74,82,83,85,86],"textrm":[76,81],"tgz":48,"th_8_2":81,"th_8_2_":79,"than":[1,2,7,11,18,21,38,41,44,46,47,51,53,54,56,58,59,60,63,73,74,75,76,77,78,81,82,83,85,86,87,92,93,96,97],"thank":[77,78,83],"thaum_m10s15_3_":81,"thaumatin":[79,81],"thei":[2,9,11,14,16,18,38,44,46,47,53,54,59,60,73,74,75,76,78,81,82,85,86,93,97],"them":[4,16,25,38,46,50,59,64,73,74,75,76,78,81,82,83,85,86,92,93,96],"themselv":[1,23],"theori":[77,91],"therapi":0,"therefor":[1,4,14,53,59,60,73,82,83,85,87],"thereof":54,"thermofish":73,"theta":[23,87],"thi":[0,1,2,3,4,6,7,9,11,14,15,16,18,21,23,24,25,29,33,34,35,36,37,38,40,41,42,43,44,46,47,48,50,51,52,53,54,55,56,58,59,60,61,63,64,66,69,70,71,72,73,74,75,76,77,78,79,81,82,83,84,85,86,87,89,91,92,93,94,95,96,97],"thick":[23,35,52,53,54,59,60,82,85],"thin":[1,18,72,95],"thing":[4,6,42,73,81,83,97],"think":[2,78,83,97],"third":[0,1,9,52,73],"thomaston":95,"thompson":[0,95],"thomson":[73,95],"thorn":95,"thorough":77,"those":[0,7,9,14,33,40,49,53,59,60,66,70,73,74,76,77,82,83,85,86,87],"though":[7,73,74,76,81,82,83,85,87],"thought":[77,78],"thousand":93,"three":[1,2,3,11,53,57,59,60,62,73,74,76,82,85,86,89,95,97],"threshold":[1,15,16,31,37,38,40,41,44,45,47,51,53,54,58,69,70,72,73,74,75,78,82,85,86],"threshold_funct":16,"threshold_prob":[53,59,60],"through":[0,1,14,23,35,63,73,74,76,77,78,82,83,85,86,87,93,97],"throughout":[0,2,81],"throughput":48,"throw":[38,47],"thrown":81,"thu":[74,82,83,85,86],"thygesen":74,"ti":74,"tick":[74,86],"tie":[53,59,60],"tie_to_group":[53,59,60],"tie_to_target":[53,59,60,74,75],"tiff":45,"tight":86,"tightli":95,"tile":[80,82,85,86],"tilt":73,"time":[0,2,4,16,24,26,33,46,63,72,73,75,76,77,81,82,83,84,85,86,94,95,97],"timepix":[74,75],"timer":33,"timestamp":[52,96],"tini":[12,26],"tiny_int_2":12,"tir":[74,80],"titl":[33,73,84],"tj":95,"tl":95,"tmp":79,"tmp4xxusn":79,"to_cryst":[27,30],"to_dict":[15,22,23,24,25],"to_imageset":[27,30],"to_json_fil":14,"to_shelx":73,"to_xd":[27,30],"todai":97,"tof":94,"tofleastsquaresresidualwithrmsdcutoff":[14,19],"tofreflectionmanag":[14,19],"tofspotfind":[16,19],"togeth":[1,2,63,72,74,75,76,81,83,97],"toggl":[4,76,82,85],"token":23,"toler":[11,18,38,41,44,51,53,54,58,63,72,75,83,87],"toll":74,"tom":97,"tomographi":95,"tono":95,"too":[14,40,53,59,60,74,78,81,82,83,85,86],"took":[79,81,83],"tool":[76,77,78,82,85,86,88,89,93],"toolbox":[2,95],"toolkit":[7,38,78,83,94,95],"top":[4,12,64,73,74,78],"topic":78,"toro":11,"tort":91,"total":[11,14,47,49,74,76,79,81,82,83,85,86,87],"total_intens":49,"total_reflect":[41,51,54,58],"touch":[76,93],"toward":[1,73,74,81,93,97],"toxic":95,"tp":[79,84],"traceback":33,"track":[14,53,59,60,76,78,82,85,86,93],"track_condition_numb":[53,59,60],"track_gradi":[53,59,60],"track_jacobian_structur":[53,59,60],"track_normal_matrix":[53,59,60],"track_out_of_sample_rmsd":[53,59,60],"track_parameter_correl":[53,59,60,83],"track_step":[53,59,60],"trade":[53,59,60],"train":[85,86,93],"tran":95,"transduct":74,"transfer":0,"transform":[2,11,39,53,60,84,86,87],"transit":77,"translat":[30,53,59,60,77,82,85],"transmiss":[21,52,82,85],"treat":[53,59,60,76,81,92],"treat_single_image_as_stil":[53,59,60],"tree":[83,86],"trek":97,"tri":[33,47],"tricki":76,"triclin":[60,70,74,75,82,85,86,87],"trigger":[53,59,60,63],"trim":[53,59,60,73],"trim_scan_to_observ":[53,59,60],"trimh":53,"triml":53,"triplet":53,"trivial":[4,78],"trivial_accessor":[10,12,25,26],"troubleshoot":78,"trough":[85,86],"trp_ag_":84,"true":[1,2,4,6,11,14,15,16,18,21,22,23,24,25,26,29,30,31,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60,62,63,64,65,66,67,68,69,70,72,73,75,77,81,82,83,85,86,92],"truncat":[18,53,54,59,60,82,84,85],"trunccauchy_pdf":[18,19],"trunk":9,"trust":[0,47,50,52,74,78],"trusted_rang":[3,23,52,82,85],"trustworthi":[46,82,85,86],"truth":83,"try":[1,4,7,24,33,63,73,74,76,77,78,79,81,82,83,85,96],"try_read_experi":33,"try_read_experiments_from_imag":33,"try_read_reflect":33,"trypsin":84,"tsai":95,"tukei":[53,54,59,60,81,82,83,84,85,86],"tune":[54,82,85,86],"tuning_const":54,"tupl":[4,11,14,15,16,18,21,22,23,25,26,33,53,59,60,83],"turn":[1,2,11,25,53,54,59,60,63,73,76,78,81,82,83,85,86,93],"tutori":[1,7,8,74,75,76,77,78,79,81,83,92],"tutorial_data":[81,85],"tw":74,"tweak":84,"twice":[53,59,60,82,85,86],"twin":[18,61,76,79],"twist":74,"two":[1,2,3,4,15,18,23,35,39,52,53,59,60,64,66,73,74,76,77,78,82,85,86,87,93],"two_theta":[23,72],"two_theta_angl":23,"two_theta_direct":23,"two_theta_refin":[71,72,76,87],"two_theta_refine_2theta":76,"tyoe":33,"type":[1,3,4,6,7,11,14,15,17,18,22,23,24,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,49,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,65,66,67,68,69,70,72,74,79,82,83,84,85,86,90],"typic":[1,2,7,11,18,35,47,48,53,54,59,60,63,66,69,72,74,78,81,82,85,86,87],"u":[2,4,35,73,74,76,77,78,81,82,83,84,85,86,87,89,95],"u_0":2,"ub":[2,74,81,82,84,85,87,95],"ub_matrix":3,"uc_abs_angle_toler":22,"uc_rel_length_toler":22,"uctbx":[2,11,22],"uervirojnangkoorn":95,"uhlig":95,"uk":[90,93,99],"ultim":77,"un":35,"unabl":[82,85],"uncertainti":[1,40,53,72,75,82,85,86,87],"unclear":2,"uncom":83,"unconstrain":87,"unconvent":77,"uncorrect":[63,81,82,85,86],"under":[0,7,15,47,48,82,83,85,86,89],"undergon":77,"underli":96,"understand":[0,78,82,84,85,86,97],"understood":86,"undertaken":72,"underwai":[81,94],"unequ":[82,85,86],"unfeas":44,"unfortun":[2,78,81,83],"unhandl":[24,33,52],"unicod":[2,75],"uniform":[82,85,86],"unindex":[53,54,73,74,78,82,84,85,86],"unindexed_reflect":11,"unintegr":[54,82,85],"uniq":[73,82,84,85],"uniqu":[24,52,53,63,72,74,76,79,82,84,85,86,87],"unit":[2,11,18,22,33,40,41,44,45,46,47,50,51,53,54,56,57,58,59,60,63,70,72,73,74,75,77,78,79,81,82,83,84,85,86,91,96],"unit_cel":[2,11,22,33,41,44,45,46,47,50,51,53,54,58,59,60,63,72,73,74,75,77,78,81,82,84,85,96],"unit_cell_clust":[40,72],"unit_s0":21,"uniti":[63,78],"univers":[2,11,93],"unknown":[2,26,44],"unless":[1,7,21,33,53,59,60,63,72,74],"unlik":87,"unmerg":[1,43,44,72,73,74,79,83,86,98],"unmerged_mtz":[1,63],"unpack":[7,75],"unphys":[41,51,54,58,82,85],"unpolar":21,"unrealist":53,"unreason":74,"unrecognis":78,"unrel":[82,85],"unscal":[15,44,75,78,82,85,86],"unsign":[10,12,14,24,25,26],"unstabl":[1,63],"unsuccess":83,"untick":86,"until":[11,14,53,59,60,73,77,78,81,82,85,86],"untrust":[47,50,51,73,75],"unus":59,"unusu":[75,83],"unwant":50,"unwarp":78,"unweight":14,"unwieldi":83,"up":[1,7,11,14,15,24,40,42,53,54,59,60,66,68,73,74,75,77,81,82,83,85,86,90,96,97],"updat":[9,14,15,33,44,53,59,63,81,82,83,84,85,86,98],"update_analysi":11,"update_detector_px_mm_data":26,"update_journ":14,"update_match":14,"update_residu":14,"upgrad":93,"upon":[15,76],"upper":[18,54,63,72,86],"upper_bound":18,"uptick":73,"us":[0,2,3,4,7,9,11,12,14,15,16,18,21,22,23,24,25,26,29,33,34,35,37,38,40,41,42,44,45,46,47,48,50,51,52,53,54,55,58,59,60,61,62,63,64,66,69,70,71,73,74,75,76,77,78,80,81,82,83,84,85,86,87,88,89,90,91,92,93,94,95,96,97],"usa":[0,2,35],"usag":[6,7,63,72,83,87],"use_al":[1,63,72],"use_all_reflect":81,"use_beam_refer":52,"use_curvatur":[18,40,72],"use_dataman_shel":72,"use_dataset":63,"use_detector_refer":52,"use_dynamic_mask":54,"use_free_set":63,"use_gonio_refer":52,"use_internal_vari":63,"use_lattice_symmetri":72,"use_p1_indices_as_se":53,"use_starting_angl":68,"used_in_index":4,"used_in_refin":[14,46],"useless":[78,83],"user":[0,2,4,7,11,14,36,46,47,48,54,63,78,79,80,82,83,85,86,89,90,93],"usernam":9,"usr":[7,90],"usual":[2,14,41,42,47,72,73,74,78,79,81,82,83,85,86,87,92],"util":[6,12,14,32,35,38,48,71,83],"utilis":97,"uuid":52,"v":[1,2,7,43,53,59,60,72,73,80,82,85,86,95,96,97],"v5":44,"v5_next":44,"vaccin":0,"vajjhala":74,"valid":[12,14,15,26,33,48,49,53,54,59,60,63,84],"valid_foreground_threshold":[12,54],"valu":[1,3,7,10,11,14,15,18,33,35,40,41,42,43,44,46,47,48,51,52,53,54,55,57,58,59,60,63,64,65,72,73,74,75,76,77,78,81,82,83,85,86,87,96],"valuabl":73,"value_max":[15,40,43,44,45,46,47,52,53,54,59,60,63,69,72],"value_min":[15,38,40,41,42,43,44,45,46,47,49,50,51,52,53,54,55,56,58,59,60,62,63,64,67,68,69,70,72],"valueerror":[15,33],"van":[53,59,60,95],"var":14,"vari":[1,14,17,41,44,51,53,54,57,58,59,60,73,74,81,82,83,84,85,86,87,92],"variabl":[2,52,63,74,75,81,86],"varianc":[1,3,14,15,40,45,47,51,54,63,72,76,82,85,86],"variat":[73,82,83,85,86,87],"varieti":93,"variou":[1,2,11,14,43,44,52,53,60,62,63,72,74,75,82,85,86,90,94],"ve":[22,74,76],"vec":2,"vec2":23,"vec3":[22,23,25],"vec3_doubl":[4,11,25],"vector":[1,2,3,6,11,14,18,21,23,34,35,40,52,53,77,82,83,85,86],"vectori":2,"vendor":26,"venugopalan":95,"verbos":[33,48,53,59,60,64,82,85,96],"veri":[1,11,35,53,73,74,76,78,81,82,83,85,86,87],"verifi":[6,24],"versa":14,"version":[7,14,35,44,48,49,75,79,81,86],"versu":[77,82,85,86],"vertic":[2,54,64,78],"via":[0,2,4,9,45,55,76,86,87,89],"view":[4,40,47,51,74,75,77,78,82,85,86,87,95,97],"viewer":[2,73,74,75,77,78,81,82,85,86,87],"viewhkl":73,"vinetski":95,"virtual":44,"virtual_fram":44,"visibl":[64,76,82,85,86],"visit":[48,93],"visual":93,"vital":0,"viz":[53,59,60],"vk":95,"vo":95,"void":[10,12,14,22,23,24,25,26],"vollmar":[89,95],"volum":[11,41,43,51,53,54,58,59,60,72,73,74,76,77,78,82,83,84,85,86,87,93,97],"volume_cutoff":[11,53],"volume_weight":[11,53],"vondelft":97,"voxel":53,"voxel_grid_point":53,"vri":95,"vv":96,"vypritskaia":95,"w":[0,2,11,14,15,95],"w_":18,"wa":[2,7,14,15,47,53,59,60,64,73,74,75,76,77,78,81,82,83,84,85,86,87],"wagner":95,"wai":[2,33,73,74,77,78,79,81,82,83,91,92,93,94,96],"wait":73,"wakatsuki":95,"wall":95,"walsh":95,"wander":74,"wang":[73,95],"want":[1,48,73,74,77,78,81,82,83,85,86,87],"ward":53,"warkentin":95,"warn":[77,78,83,85],"warn_if_setting_unused_refinement_protocol_param":11,"warranti":91,"wast":97,"water":95,"waterman":[0,11,73,75,89,95,97,98],"wave":11,"wavelength":[3,6,14,18,21,22,33,38,44,52,53,59,60,63,72,73,74,75,79,82,84,85,87],"wavelength_rang":[21,52],"wavelength_spread":[41,51,54,58],"wavelength_toler":[24,33,44,72],"wavelength_weight":[14,53,59,60],"wavelengthgroup":[32,33],"we":[0,2,4,7,11,14,16,21,25,26,33,35,37,73,74,75,76,77,78,79,81,82,83,84,85,86,87,89,90,92,94,95,96,97],"weak":[1,75,77,78,79,96],"weaker":[73,77],"weakli":[63,81],"weatherbi":95,"web":[48,71,73],"webber":0,"webpag":48,"webserv":48,"wedg":[1,11,53,80,83,86],"week":93,"weekend":0,"wei":95,"weight":[10,11,14,15,18,40,53,59,60,63,72,81,82,83,85],"weighted_mean":33,"weighting_schem":63,"weighting_strategi":[14,53,59,60],"weighting_strategy_overrid":14,"welcom":[0,83],"well":[11,29,44,57,62,72,73,74,75,76,78,81,82,83,85,86],"wellcom":[0,89],"wen":95,"weng":95,"wening":95,"were":[4,11,14,38,48,73,74,75,76,77,78,81,82,83,84,85,86,87],"wernet":95,"wersig":95,"west":99,"westbrook":2,"wf":95,"wget":[9,48,90],"what":[2,14,23,72,74,76,77,78,82,84,85,86,97],"whatev":[78,82,83,85,86],"wheel":0,"when":[1,2,9,11,14,15,18,25,26,33,35,38,44,47,50,51,52,53,54,59,60,63,64,66,69,70,72,73,75,76,77,78,79,82,83,85,86,89,92,96],"whenev":4,"where":[1,2,4,7,11,14,15,18,21,23,24,25,26,29,35,38,40,43,44,47,49,52,53,54,55,59,60,63,66,69,72,74,76,77,78,81,82,83,85,86,87,90],"wherea":[47,63,74,81,82,85,86],"whether":[1,4,14,15,18,33,38,47,51,53,54,57,59,60,62,63,65,69,72,82,83,85,86,91],"which":[0,1,2,4,7,11,14,15,18,21,22,23,25,29,33,35,37,38,40,42,43,44,46,47,48,50,51,52,53,54,57,59,60,61,62,63,65,70,72,73,74,75,76,77,78,81,82,83,84,85,86,87,90,92,96],"while":[1,2,9,14,38,53,64,66,74,75,81,82,83,85,86,87],"whilst":[2,3,53,59,60,83],"white":[94,95,97],"whitelegg":95,"who":[0,7],"whole":[1,4,47,50,51,53,59,60,63,72,76,78,81,82,83,85,86],"whose":[2,47,50,51,53,54,59,60],"why":[82,85,97],"wi":95,"wide":[1,7,47,51,53,64,74,76],"wide_search_bin":[53,64],"wider":[53,59,60],"width":[12,14,15,18,38,46,47,50,51,53,59,60,64,66,75,81,82,85,86],"wiki":[7,9,18],"wikipedia":18,"wildcard":86,"william":[0,95],"wilson":[40,73,79,82,85,95],"window":[7,64,73,75,78,86,90],"winn":79,"winter":[0,11,18,40,79,89,95,97,98],"wish":[0,87],"within":[0,1,2,4,7,14,37,47,50,51,52,53,58,59,60,63,64,66,72,74,79,81,82,83,85,86,87,89,97],"within_spot_sigma":54,"without":[3,7,33,76,78,81,83,86,87,91,92],"wj":[73,95],"wl":33,"wojdyr":0,"woldey":95,"wolfgang":97,"wolfram":[77,78],"won":[74,76,81],"word":78,"work":[0,2,4,7,9,11,14,21,25,33,53,54,59,60,63,64,73,74,76,77,78,79,81,83,85,86,87,89,92,94,97],"workaround":81,"workflow":95,"workshop":[0,11,85,86,93],"world":0,"worldwid":93,"worri":[78,81,86],"wors":[77,81,82,83,85,86],"worsen":85,"worst":45,"worth":[72,76,78,82,83,84,85,86],"would":[1,7,15,53,59,60,64,73,74,75,76,77,78,81,82,83,84,85,86,92,97],"wp6":97,"wrap":[29,96,97],"wrapper":18,"write":[3,7,33,40,44,46,47,53,59,60,70,74,77,78,81,82,83,84,85,86,96],"write_column":[32,33],"write_hot_mask":[16,47],"write_hot_pixel_mask":16,"writer":33,"written":[0,2,7,44,45,52,74,82,83,84,85,91],"wrong":[14,74,78,81,82,85],"wrongli":78,"wrt":2,"www":48,"wx":14,"wxtbx":33,"wy":14,"wz":14,"x":[0,1,2,11,14,18,21,22,23,25,33,35,40,43,47,50,51,52,53,59,60,61,63,64,73,74,75,76,78,81,82,83,85,86,89,90,94,95,97],"x0":[47,50,51],"x0692":82,"x0692_1_":82,"x0692_1_0":82,"x1":[47,50,51],"x212b":[2,75],"x247398":78,"x86_64":[7,90],"xaamdi":35,"xc":[47,50,51,81,82,83,85],"xchem":82,"xd":[0,22,24,30,44,53,78,81,82,85,86,97],"xdg":74,"xds_ascii":[30,44],"xds_detector_nam":[27,30],"xds_inp":[24,30],"xds_other":24,"xfel":[89,93],"xia":76,"xia2":[30,71,73,80,82,85,87,95],"xjf":[7,90],"xml":[49,54],"xo":[81,82,83,85],"xparm":[30,33,44],"xparm_xd":30,"xprep":[70,73,87],"xrai":21,"xscale":[1,44],"xta":83,"xta30_1_":83,"xta31_1_":83,"xtal":[44,63,83,84],"xtal7_1_":83,"xtal8_1_":83,"xtal_height_above_kapton_mm":54,"xu":74,"xvf":78,"xy":[82,85],"xycorr":30,"xyz":18,"xyzcal":3,"xyzob":[3,14],"xz":[7,44,76,90],"xzf":90,"y":[1,2,11,14,18,21,22,23,25,40,43,47,50,51,52,53,59,60,61,63,64,73,74,75,76,78,81,82,83,85,86,95],"y0":[47,50,51],"y1":[47,50,51],"yachandra":95,"yamashita":95,"yang":95,"yano":95,"yao":95,"yash":0,"yc":[47,50,51,81,82,83,85],"yd":22,"year":[89,97],"yellow":73,"yet":[81,82,83,85,86],"yeung":95,"yield":87,"yilmaz":83,"yo":[81,82,83,85],"yoon":74,"you":[1,4,7,9,23,40,48,54,71,72,73,74,76,77,78,79,81,82,83,85,86,87,90,97],"young":[0,89,95],"your":[4,7,9,35,48,73,76,77,79,82,83,85,86,87,92],"yourself":76,"yumoto":95,"z":[14,18,21,22,23,25,33,40,43,61,63,73,76,78,82,85,86,89],"z_cc":18,"z_cc_against":18,"z_cc_for":18,"z_cc_net":18,"zadvornyi":95,"zatsepin":74,"zcc":[18,40,73,76,82,84,85,86],"zeldin":[0,95],"zenodo":[82,87],"zero":[1,2,11,35,47,53,54,59,60,63,64,66,69,70,73,81],"zerr":73,"zeta":[41,51,54,58,82,85,86],"zhang":95,"zhao":[74,95],"zhou":95,"zhu":95,"zinger":[73,83],"zlib":45,"zmax":15,"zone":[11,58,74],"zoo":76,"zoom":[73,74,76,77,82,85],"zou":[74,95],"zouni":95,"zwart":95,"\u00b2":[82,85],"\u00b5m":74,"\u00e5":[6,21,73,74,76,82,85,86,95],"\u00e5ngstr\u00f6m":74,"\u0161rajer":95,"\u03b1":[74,95],"\u03b2":[40,72,74],"\u03b3":74,"\u03b4":[40,72,86],"\u03b4cc\u00bd":[63,72,74,76],"\u03ba":2,"\u03c3":[40,72,82,85],"\u03c3\u00b2":[82,85],"\u03c6":[2,82,85,86],"\u03c9":2,"\u2460":[82,85],"\u2461":[82,85],"\u2462":[82,85],"\ud835\udfd9":2},"titles":["About","User guide for scaling data with DIALS","Conventions","Data files","Extending DIALS","Developer Examples","Reading experiment and data","Getting started","Documentation","Installation for Developers","dials.algorithms.background","dials.algorithms.indexing","dials.algorithms.integration","dials.algorithms.profile_model","dials.algorithms.refinement","dials.algorithms.scaling","dials.algorithms.spot_finding","dials.algorithms.spot_prediction","dials.algorithms.symmetry","Algorithms","Array Family","dxtbx.model.beam","dxtbx.model.crystal","dxtbx.model.detector","dxtbx.model.experiment_list","dxtbx.model.goniometer","dxtbx.imageset","dxtbx","dxtbx.model.profile","dxtbx.model.scan","dxtbx.serialize","Extensions","Library Reference","Util","dials.align_crystal","dials.anvil_correction","dials.apply_mask","dials.check_indexing_symmetry","dials.combine_experiments","dials.compare_orientation_matrices","dials.cosym","dials.create_profile_model","dials.estimate_gain","dials.estimate_resolution","dials.export","dials.export_bitmaps","dials.filter_reflections","dials.find_spots","distl/dials apache server","dials.find_spots_server/client","dials.generate_mask","dials.image_viewer","dials.import","dials.index","dials.integrate","dials.merge_cbf","dials.missing_reflections","dials.plot_scan_varying_model","dials.predict","dials.refine","dials.refine_bravais_settings","dials.reindex","dials.report","dials.scale","dials.search_beam_position","dials.show","dials.slice_sequence","dials.spot_counts_per_image","dials.stereographic_projection","dials.symmetry","dials.two_theta_refine","Program documentation","xia2.multiplex","Processing Small Molecule MicroED/3DED: Biotin","MyD88<sup>TIR</sup> small wedges","Lysozyme nanocrystals","Multi-crystal analysis with DIALS and xia2.multiplex","DPF3 Part 2: A question of centring","DPF3 Part 1: Correcting poor initial geometry","Using DIALS at Diamond Light Source","Tutorials","Refining multi-tile detector metrology with DIALS","SARS-CoV-2 main protease (Mpro)","Multi-crystal analysis with DIALS and BLEND: individual vs joint refinement","Multi-lattice Tutorial","Processing in Detail","Processing in Detail with DUI","Small-molecule data reduction tutorial","DIALS How-To guides","DIALS: Diffraction Integration for Advanced Light Sources","Installation","DIALS License","Processing Sequences with Missing Images","US DIALS National Resource","Projects","Publications","SSX processing guide","DIALS 1: 12th-13th June 2012 (Diamond Light Source, UK)","DIALS-3: 22nd May 2013 (Cambridge, UK)","Workshops"],"titleterms":{"0":[76,90],"1":[75,78,97],"10":76,"12th":97,"13th":97,"19":76,"2":[75,77,82],"20":76,"2012":97,"2013":98,"22nd":98,"23":90,"29":76,"3":[75,90,98],"3ded":[73,95],"4":75,"5":75,"6":75,"7":75,"9":76,"A":77,"No":9,"The":2,"To":88,"about":[0,73],"acknowledg":[0,77,78,81,83],"activ":93,"ad":4,"administr":93,"advanc":[1,89],"against":1,"algorithm":[10,11,12,13,14,15,16,17,18,19],"align_cryst":34,"altern":87,"analysi":[74,76,82,83,85],"anvil_correct":35,"apach":48,"appli":81,"applic":95,"apply_mask":36,"arrai":20,"articl":95,"attende":98,"axi":74,"background":10,"bad":73,"basi":4,"basic":[34,36,37,38,39,40,41,42,43,44,45,46,47,49,50,51,52,53,54,55,57,58,59,60,61,62,63,64,65,66,67,68,69,70,72],"basis_vector_search":11,"beam":[21,73,78],"better":78,"binari":90,"biotin":73,"blend":83,"board":93,"bookkeep":76,"bravai":[73,82,85,86,87],"build":[48,90],"built":7,"cambridg":98,"case":[43,72],"cc":76,"cell":[76,87],"center":73,"centr":[73,77,78],"check":[78,86],"check_indexing_symmetri":37,"choos":1,"cite":89,"class":4,"client":49,"cluster":76,"collect":73,"combine_experi":38,"committe":97,"common":1,"commun":93,"compare_orientation_matric":39,"comparison":76,"conclus":[77,78],"contact":89,"content":[4,20,31],"control":1,"convent":2,"convert":77,"coordin":2,"correct":[73,78,81],"cosym":[18,40],"cov":82,"create_profile_model":41,"crystal":[22,76,83],"crystallographi":95,"current":9,"data":[1,3,6,9,73,74,75,76,82,85,86,87,96],"dataset":[1,73,75,83],"defin":4,"definit":[34,35,36,37,38,39,40,41,42,43,44,45,46,47,49,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,65,66,67,68,69,70,72],"delta":76,"detail":[35,85,86],"detector":[23,74,81],"determin":[73,74,87],"develop":[0,5,9,90],"dial":[0,1,4,7,9,10,11,12,13,14,15,16,17,18,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,65,66,67,68,69,70,76,79,81,83,88,89,90,91,93,94,95,96,97,98],"diamond":[79,97],"diffract":[89,94],"diffractomet":2,"discov":78,"distanc":74,"distl":48,"do":[81,83],"document":[8,71],"download":9,"dpf3":[77,78],"dui":86,"dxtbx":[2,21,22,23,24,25,26,27,28,29,30],"entri":4,"environ":[7,9],"equat":2,"estimate_gain":42,"estimate_resolut":43,"exampl":[5,40,43,72],"exclud":73,"experi":[3,6,76],"experiment":78,"experiment_list":24,"explor":76,"exploratori":74,"export":[44,73,82,85,86,87,92],"export_bitmap":45,"extend":4,"extens":31,"famili":20,"feedback":79,"file":3,"filter_reflect":46,"find":[73,74,75,78,82,85,86,87],"find_spot":47,"find_spots_serv":49,"format":4,"frame":[2,73],"full":[34,35,36,37,38,39,40,41,42,43,44,45,46,47,49,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,65,66,67,68,69,70,72],"fund":89,"further":74,"gener":[73,79],"generate_mask":50,"geometri":[73,78],"get":7,"gltbx_gl_ext":9,"goal":93,"goniomet":[2,25],"graphic":90,"guid":[1,88,96],"half":76,"help":7,"how":88,"html":[82,85],"imag":[73,92],"image_view":51,"imageset":26,"import":[52,73,75,78,82,84,85,86,87,92],"index":[4,11,53,73,74,75,78,82,84,85,86,87,96],"individu":83,"initi":78,"inspect":86,"instal":[7,9,90],"instruct":48,"integr":[12,54,73,74,75,82,84,85,86,87,89,96],"intens":76,"introduct":[34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,65,66,67,68,69,70,72,74,75,76,77,78,81,82,83,84,85,86,87],"joint":83,"jointli":83,"journal":95,"june":97,"keep":9,"laboratori":2,"larg":1,"lattic":[4,73,74,77,82,84,85,86,87],"lattice_search":11,"librari":32,"licens":91,"light":[79,89,97],"linux":[9,90],"list":3,"lysozym":75,"mac":[9,90],"mai":98,"main":82,"mask":73,"matrix":2,"max_cel":11,"merg":[75,82,84,85],"merge_cbf":55,"method":4,"metrologi":81,"micro":[73,95],"minimis":1,"miss":92,"missing_reflect":56,"model":[1,2,4,15,21,22,23,24,25,28,29,75,78],"model_evalu":11,"modul":9,"modulenotfounderror":9,"molecul":[73,87],"mpro":82,"mtz":[82,85,86],"multi":[73,76,81,83,84],"multiplex":[72,76],"myd88tir":74,"name":9,"nanocryst":75,"nation":93,"neutron":94,"new":4,"newslett":95,"next":[7,81,83],"note":73,"offset":73,"option":[1,73],"organis":97,"orient":[2,74,76],"orthogonalis":2,"other":73,"outlier_reject":15,"output":87,"paramet":[7,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,65,66,67,68,69,70,72],"part":[77,78],"path":87,"pedest":73,"plot_scan_varying_model":57,"point":4,"poor":78,"post":76,"practic":1,"predict":58,"preferenti":76,"prepar":81,"present":[97,98],"process":[73,74,76,83,85,86,92,96],"profil":[4,28],"profile_model":13,"program":[71,97,98],"project":94,"proteas":82,"pseudocentr":77,"public":95,"question":77,"re":73,"read":6,"reciproc":76,"reduct":87,"refer":[1,32],"refin":[14,59,73,74,75,81,82,83,84,85,86,87,92],"refine_bravais_set":60,"reflect":[1,3],"regress":9,"reindex":61,"releas":90,"report":[62,82,85,95],"resourc":93,"result":86,"sadab":87,"sar":82,"scale":[1,4,15,63,73,74,75,82,84,85,86,87],"scan":[29,75],"script":74,"search":4,"search_beam_posit":64,"sequenc":92,"serial":30,"server":48,"set":[9,76],"show":65,"slice_sequ":66,"small":[73,74,87],"softwar":93,"solv":73,"sourc":[7,79,89,97],"space":76,"spot":[73,74,75,78,82,85,86,87],"spot_counts_per_imag":67,"spot_find":16,"spot_predict":17,"spotfind":84,"ssx":96,"ssx_index":96,"ssx_integr":96,"stabl":90,"staff":93,"start":7,"static":[4,75],"step":7,"stereographic_project":68,"stills_index":11,"strategi":4,"structur":73,"summari":2,"support":93,"symmetri":[18,69,73,74,77,78,82,84,85,86,87],"synchrotron":95,"tabl":[20,31],"team":0,"test":[9,48],"tile":81,"tilt":74,"togeth":73,"tutori":[80,82,84,85,86,87],"two_theta_refin":70,"u":[0,93],"uk":[0,97,98],"understand":4,"unit":[76,87],"unmerg":[82,85],"up":9,"us":[1,43,72,79],"user":1,"util":33,"v":83,"vari":75,"vector":4,"video":73,"wedg":74,"what":[81,83],"workshop":99,"write":4,"xfel":95,"xia2":[72,76,79]}})